CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 113

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16113G113CG6911CnonsynGgtTgt40234023120995-20997
ORF1ab/nsp16113G113SG6911SnonsynGgtAgt2552540.99607820995-20997
ORF1ab/nsp16113G113SG6911SnonsynGgTAgC25510.0039215720995-20997
ORF1ab/nsp16113G113VG6911VnonsyngGtgTt167167120995-20997
ORF1ab/nsp16113G113GG6911GsynggTggC1631530.9386520995-20997
ORF1ab/nsp16113G113GG6911GsynggTggG16350.030674820995-20997
ORF1ab/nsp16113G113GG6911GsynggTggA16350.030674820995-20997
ORF1ab/nsp16113G113delG6911deldelGGT---3939120995-20997
ORF1ab/nsp16113G113del1G6911del1delGgt-gt950.55555620995-20997
ORF1ab/nsp16113G113del1G6911del1delggTgg-920.22222220995-20997
ORF1ab/nsp16113G113del1G6911del1delGgTTg-910.11111120995-20997
ORF1ab/nsp16113G113del1G6911del1delGGTAA-910.11111120995-20997
ORF1ab/nsp16113G113AG6911AnonsyngGtgCt88120995-20997
ORF1ab/nsp16113G113DG6911DnonsyngGtgAt760.85714320995-20997
ORF1ab/nsp16113G113DG6911DnonsyngGTgAC710.14285720995-20997
ORF1ab/nsp16113G113RG6911RnonsynGgtCgt66120995-20997
ORF1ab/nsp16113G113NG6911NnonsynGGtAAt320.66666720995-20997
ORF1ab/nsp16113G113NG6911NnonsynGGTAAC310.33333320995-20997
ORF1ab/nsp16113G113WG6911WnonsynGgTTgG22120995-20997
ORF1ab/nsp16113G113FG6911FnonsynGGtTTt11120995-20997

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16113G113CGgtTgt40234023All0.000769
ORF1ab/nsp16113G113CGgtTgt11501150B.1.177.600.251201
ORF1ab/nsp16113G113CGgtTgt486486B.1.1.70.000435
ORF1ab/nsp16113G113CGgtTgt410410AY.430.001816
ORF1ab/nsp16113G113CGgtTgt320320AY.40.000498
ORF1ab/nsp16113G113SGgtAgt254255All0.000049
ORF1ab/nsp16113G113SGgTAgC1255All0
ORF1ab/nsp16113G113CGgtTgt185185AY.540.017639
ORF1ab/nsp16113G113VgGtgTt167167All0.000032
ORF1ab/nsp16113G113GggTggC153163All0.000029
ORF1ab/nsp16113G113GggTggA5163All0.000001
ORF1ab/nsp16113G113GggTggG5163All0.000001
ORF1ab/nsp16113G113CGgtTgt139139B.1.617.20.000523
ORF1ab/nsp16113G113SGgtAgt132132B.1.1.70.000118
ORF1ab/nsp16113G113CGgtTgt104104U.20.912281
ORF1ab/nsp16113G113CGgtTgt7676U.10.974359
ORF1ab/nsp16113G113GggTggC7374AY.1030.000453
ORF1ab/nsp16113G113GggTggG174AY.1030.000006
ORF1ab/nsp16113G113CGgtTgt7474B.1.1770.000974
ORF1ab/nsp16113G113CGgtTgt6565B.10.000595
ORF1ab/nsp16113G113CGgtTgt6363B.1.177.790.147541
ORF1ab/nsp16113G113CGgtTgt5858AY.200.002254
ORF1ab/nsp16113G113CGgtTgt5555AY.440.000335
ORF1ab/nsp16113G113CGgtTgt4444AY.1020.001167
ORF1ab/nsp16113G113CGgtTgt4343B.1.1.5190.001708
ORF1ab/nsp16113G113CGgtTgt4242B.1.1.4320.053165
ORF1ab/nsp16113G113CGgtTgt4040B.1.3970.194175
ORF1ab/nsp16113G113delGGT---3939All0.000007
ORF1ab/nsp16113G113CGgtTgt3535AY.60.001439
ORF1ab/nsp16113G113VgGtgTt3232B.1.1.70.000029
ORF1ab/nsp16113G113CGgtTgt3131AY.980.002449
ORF1ab/nsp16113G113CGgtTgt2727B.1.1.500.01833
ORF1ab/nsp16113G113CGgtTgt2626B.1.10.000472
ORF1ab/nsp16113G113CGgtTgt2222AY.1030.000137
ORF1ab/nsp16113G113CGgtTgt2222AY.250.000132
ORF1ab/nsp16113G113GggTggC1921B.1.1.70.000017
ORF1ab/nsp16113G113GggTggA221B.1.1.70.000002
ORF1ab/nsp16113G113CGgtTgt1616AY.30.000159
ORF1ab/nsp16113G113CGgtTgt1616AY.90.001082
ORF1ab/nsp16113G113CGgtTgt1515AY.390.000371
ORF1ab/nsp16113G113CGgtTgt1515AY.4.20.000325
ORF1ab/nsp16113G113VgGtgTt1515B.1.1.2740.075758
ORF1ab/nsp16113G113CGgtTgt1515B.1.20.000132
ORF1ab/nsp16113G113CGgtTgt1414AY.290.000221
ORF1ab/nsp16113G113CGgtTgt1414AY.330.000935
ORF1ab/nsp16113G113VgGtgTt1414AY.50.000289
ORF1ab/nsp16113G113CGgtTgt1414B.1.1.2770.010622
ORF1ab/nsp16113G113VgGtgTt1313AY.4.20.000282
ORF1ab/nsp16113G113SGgtAgt1313AY.50.000268
ORF1ab/nsp16113G113CGgtTgt1313AY.98.10.00063
ORF1ab/nsp16113G113SGgtAgt1212AY.40.000019
ORF1ab/nsp16113G113VgGtgTt1212AY.40.000019
ORF1ab/nsp16113G113GggTggC1111AY.250.000066
ORF1ab/nsp16113G113SGgtAgt1111B.1.617.20.000041
ORF1ab/nsp16113G113CGgtTgt1111C.360.010018
ORF1ab/nsp16113G113CGgtTgt1111P.1.150.002556
ORF1ab/nsp16113G113VgGtgTt1010AY.1030.000062
ORF1ab/nsp16113G113CGgtTgt1010AY.370.003161
ORF1ab/nsp16113G113delGGT---1010B.1.1.70.000009
ORF1ab/nsp16113G113CGgtTgt1010P.10.000158
ORF1ab/nsp16113G113del1Ggt-gt59All0.000001
ORF1ab/nsp16113G113del1ggTgg-29All0
ORF1ab/nsp16113G113del1GgTTg-19All0
ORF1ab/nsp16113G113del1GGTAA-19All0
ORF1ab/nsp16113G113CGgtTgt99AY.1000.000414
ORF1ab/nsp16113G113VgGtgTt99AY.430.00004
ORF1ab/nsp16113G113CGgtTgt99AY.610.000943
ORF1ab/nsp16113G113CGgtTgt99B.1.2400.00194
ORF1ab/nsp16113G113CGgtTgt99B.1.2430.000626
ORF1ab/nsp16113G113CGgtTgt99B.1.5160.017613
ORF1ab/nsp16113G113AgGtgCt88All0.000002
ORF1ab/nsp16113G113GggTggC88AY.200.000311
ORF1ab/nsp16113G113VgGtgTt88B.1.617.20.00003
ORF1ab/nsp16113G113SGgtAgt88N.90.047619
ORF1ab/nsp16113G113CGgtTgt88Q.80.001319
ORF1ab/nsp16113G113DgGtgAt67All0.000001
ORF1ab/nsp16113G113DgGTgAC17All0
ORF1ab/nsp16113G113CGgtTgt77B.1.3510.000208
ORF1ab/nsp16113G113CGgtTgt77B.1.5170.002989
ORF1ab/nsp16113G113CGgtTgt77C.20.112903
ORF1ab/nsp16113G113RGgtCgt66All0.000001
ORF1ab/nsp16113G113CGgtTgt66AY.120.001896
ORF1ab/nsp16113G113SGgtAgt66AY.250.000036
ORF1ab/nsp16113G113SGgtAgt66AY.330.000401
ORF1ab/nsp16113G113SGgtAgt66AY.390.000148
ORF1ab/nsp16113G113GggTggC66AY.40.000009
ORF1ab/nsp16113G113CGgtTgt66AY.420.000241
ORF1ab/nsp16113G113SGgtAgt66AY.440.000037
ORF1ab/nsp16113G113CGgtTgt66AY.99.20.000553
ORF1ab/nsp16113G113SGgtAgt66AZ.50.021053
ORF1ab/nsp16113G113CGgtTgt66B.1.3110.001647
ORF1ab/nsp16113G113VgGtgTt55AY.1110.000916
ORF1ab/nsp16113G113CGgtTgt55AY.1190.000177
ORF1ab/nsp16113G113VgGtgTt55AY.250.00003
ORF1ab/nsp16113G113GggTggC55AY.260.000142
ORF1ab/nsp16113G113CGgtTgt55AY.46.60.000361
ORF1ab/nsp16113G113CGgtTgt55AY.470.000156
ORF1ab/nsp16113G113CGgtTgt55B0.000639
ORF1ab/nsp16113G113CGgtTgt55B.1.1600.000156
ORF1ab/nsp16113G113CGgtTgt55B.1.2580.000333
ORF1ab/nsp16113G113CGgtTgt55B.1.4270.000252
ORF1ab/nsp16113G113CGgtTgt55B.1.4290.000118
ORF1ab/nsp16113G113SGgtAgt55B.1.4290.000118
ORF1ab/nsp16113G113CGgtTgt55B.1.5950.001305
ORF1ab/nsp16113G113delGGT---440.222222
ORF1ab/nsp16113G113CGgtTgt440.222222
ORF1ab/nsp16113G113CGgtTgt44AY.1060.00134
ORF1ab/nsp16113G113CGgtTgt44AY.1180.000251
ORF1ab/nsp16113G113GggTggC44AY.440.000024
ORF1ab/nsp16113G113VgGtgTt44AY.740.000463
ORF1ab/nsp16113G113CGgtTgt44AY.9.20.000147
ORF1ab/nsp16113G113CGgtTgt44B.1.1.1890.006051
ORF1ab/nsp16113G113CGgtTgt44B.1.1.2840.00043
ORF1ab/nsp16113G113CGgtTgt44B.1.177.210.000306
ORF1ab/nsp16113G113VgGtgTt44B.1.20.000035
ORF1ab/nsp16113G113CGgtTgt44B.1.243.20.057971
ORF1ab/nsp16113G113CGgtTgt44P.1.140.000191
ORF1ab/nsp16113G113CGgtTgt44P.20.000747
ORF1ab/nsp16113G113GggTggG230.111111
ORF1ab/nsp16113G113GggTggC130.055556
ORF1ab/nsp16113G113NGGtAAt23All0
ORF1ab/nsp16113G113NGGTAAC13All0
ORF1ab/nsp16113G113SGgtAgt33AY.1030.000019
ORF1ab/nsp16113G113CGgtTgt33AY.1090.002219
ORF1ab/nsp16113G113CGgtTgt33AY.1200.000112
ORF1ab/nsp16113G113CGgtTgt33AY.140.000264
ORF1ab/nsp16113G113CGgtTgt33AY.230.000209
ORF1ab/nsp16113G113CGgtTgt33AY.260.000085
ORF1ab/nsp16113G113CGgtTgt33AY.3.10.000256
ORF1ab/nsp16113G113delGGT---33AY.40.000005
ORF1ab/nsp16113G113SGgtAgt33AY.430.000013
ORF1ab/nsp16113G113GggTggC23AY.430.000009
ORF1ab/nsp16113G113GggTggA13AY.430.000004
ORF1ab/nsp16113G113CGgtTgt33AY.450.000365
ORF1ab/nsp16113G113CGgtTgt33AY.50.000062
ORF1ab/nsp16113G113VgGtgTt33AY.90.000203
ORF1ab/nsp16113G113GggTggC13B.10.000009
ORF1ab/nsp16113G113GggTggA13B.10.000009
ORF1ab/nsp16113G113GggTggG13B.10.000009
ORF1ab/nsp16113G113SGgtAgt33B.1.10.000054
ORF1ab/nsp16113G113CGgtTgt33B.1.1.10.00098
ORF1ab/nsp16113G113CGgtTgt33B.1.1.2890.00625
ORF1ab/nsp16113G113CGgtTgt33B.1.1.630.001157
ORF1ab/nsp16113G113del1Ggt-gt23B.1.1.70.000002
ORF1ab/nsp16113G113del1ggTgg-13B.1.1.70.000001
ORF1ab/nsp16113G113CGgtTgt33B.1.2340.000396
ORF1ab/nsp16113G113CGgtTgt33B.1.3430.0625
ORF1ab/nsp16113G113SGgtAgt33B.1.4270.000151
ORF1ab/nsp16113G113CGgtTgt33B.1.4700.004213
ORF1ab/nsp16113G113CGgtTgt33B.1.5260.000071
ORF1ab/nsp16113G113CGgtTgt33B.1.5640.001278
ORF1ab/nsp16113G113GggTggC33B.1.617.20.000011
ORF1ab/nsp16113G113VgGtgTt33B.1.6210.000266
ORF1ab/nsp16113G113CGgtTgt33B.1.80.005917
ORF1ab/nsp16113G113delGGT---33P.1.150.000697
ORF1ab/nsp16113G113WGgTTgG220.111111
ORF1ab/nsp16113G113NGGTAAC120.055556
ORF1ab/nsp16113G113SGgTAgC120.055556
ORF1ab/nsp16113G113DgGTgAC120.055556
ORF1ab/nsp16113G113NGGtAAt120.055556
ORF1ab/nsp16113G113DgGtgAt120.055556
ORF1ab/nsp16113G113SGgtAgt120.055556
ORF1ab/nsp16113G113WGgTTgG22All0
ORF1ab/nsp16113G113VgGtgTt22AY.1020.000053
ORF1ab/nsp16113G113VgGtgTt22AY.1190.000071
ORF1ab/nsp16113G113delGGT---22AY.250.000012
ORF1ab/nsp16113G113RGgtCgt22AY.250.000012
ORF1ab/nsp16113G113CGgtTgt22AY.270.000129
ORF1ab/nsp16113G113SGgtAgt22AY.290.000032
ORF1ab/nsp16113G113DgGtgAt22AY.40.000003
ORF1ab/nsp16113G113RGgtCgt22AY.40.000003
ORF1ab/nsp16113G113delGGT---22AY.4.50.000215
ORF1ab/nsp16113G113SGgtAgt22AY.420.00008
ORF1ab/nsp16113G113VgGtgTt22AY.440.000012
ORF1ab/nsp16113G113CGgtTgt22AY.460.000208
ORF1ab/nsp16113G113CGgtTgt22AY.530.000575
ORF1ab/nsp16113G113CGgtTgt22AY.550.001835
ORF1ab/nsp16113G113CGgtTgt22AY.750.000112
ORF1ab/nsp16113G113CGgtTgt22AY.9.10.000167
ORF1ab/nsp16113G113SGgtAgt22AY.930.000546
ORF1ab/nsp16113G113SGgtAgt22B.10.000018
ORF1ab/nsp16113G113CGgtTgt22B.1.1.2140.000111
ORF1ab/nsp16113G113CGgtTgt22B.1.1.270.011299
ORF1ab/nsp16113G113CGgtTgt22B.1.1.3170.000823
ORF1ab/nsp16113G113SGgtAgt22B.1.1.330.000842
ORF1ab/nsp16113G113VgGtgTt22B.1.1770.000026
ORF1ab/nsp16113G113CGgtTgt22B.1.177.170.001642
ORF1ab/nsp16113G113SGgtAgt22B.1.177.870.001456
ORF1ab/nsp16113G113CGgtTgt22B.1.177.870.001456
ORF1ab/nsp16113G113CGgtTgt22B.1.214.20.001199
ORF1ab/nsp16113G113CGgtTgt22B.1.360.000292
ORF1ab/nsp16113G113GggTggC22B.1.360.000292
ORF1ab/nsp16113G113DgGtgAt22B.1.4000.000858
ORF1ab/nsp16113G113CGgtTgt22B.1.5960.000174
ORF1ab/nsp16113G113CGgtTgt22C.370.000232
ORF1ab/nsp16113G113VgGtgTt22C.370.000232
ORF1ab/nsp16113G113CGgtTgt22D.20.00015
ORF1ab/nsp16113G113CGgtTgt22N.90.011905
ORF1ab/nsp16113G113VgGtgTt22P.1.140.000096
ORF1ab/nsp16113G113CGgtTgt22Q.10.000253
ORF1ab/nsp16113G113CGgtTgt22R.10.00018
ORF1ab/nsp16113G113FGGtTTt110.055556
ORF1ab/nsp16113G113VgGtgTt110.055556
ORF1ab/nsp16113G113GggTggC11A.2.40.003367
ORF1ab/nsp16113G113CGgtTgt11A.30.002096
ORF1ab/nsp16113G113delGGT---11AD.20.000219
ORF1ab/nsp16113G113VgGtgTt11AD.20.000219
ORF1ab/nsp16113G113FGGtTTt11All0
ORF1ab/nsp16113G113CGgtTgt11AP.10.001502
ORF1ab/nsp16113G113CGgtTgt11AY.1010.00049
ORF1ab/nsp16113G113CGgtTgt11AY.1040.001984
ORF1ab/nsp16113G113CGgtTgt11AY.110.001339
ORF1ab/nsp16113G113CGgtTgt11AY.1100.000113
ORF1ab/nsp16113G113CGgtTgt11AY.1110.000183
ORF1ab/nsp16113G113CGgtTgt11AY.1130.000142
ORF1ab/nsp16113G113CGgtTgt11AY.1140.000231
ORF1ab/nsp16113G113CGgtTgt11AY.1160.000287
ORF1ab/nsp16113G113CGgtTgt11AY.1170.000085
ORF1ab/nsp16113G113VgGtgTt11AY.1180.000063
ORF1ab/nsp16113G113GggTggC11AY.1190.000035
ORF1ab/nsp16113G113SGgtAgt11AY.1200.000037
ORF1ab/nsp16113G113delGGT---11AY.1200.000037
ORF1ab/nsp16113G113CGgtTgt11AY.120.10.000321
ORF1ab/nsp16113G113CGgtTgt11AY.1210.000135
ORF1ab/nsp16113G113CGgtTgt11AY.130.000161
ORF1ab/nsp16113G113AgGtgCt11AY.140.000088
ORF1ab/nsp16113G113CGgtTgt11AY.160.00038
ORF1ab/nsp16113G113GggTggC11AY.160.00038
ORF1ab/nsp16113G113VgGtgTt11AY.200.000039
ORF1ab/nsp16113G113SGgtAgt11AY.240.000431
ORF1ab/nsp16113G113del1Ggt-gt11AY.250.000006
ORF1ab/nsp16113G113AgGtgCt11AY.260.000028
ORF1ab/nsp16113G113CGgtTgt11AY.29.10.000221
ORF1ab/nsp16113G113SGgtAgt11AY.30.00001
ORF1ab/nsp16113G113SGgtAgt11AY.3.10.000085
ORF1ab/nsp16113G113CGgtTgt11AY.310.018519
ORF1ab/nsp16113G113delGGT---11AY.330.000067
ORF1ab/nsp16113G113delGGT---11AY.360.000148
ORF1ab/nsp16113G113GggTggC11AY.390.000025
ORF1ab/nsp16113G113AgGtgCt11AY.40.000002
ORF1ab/nsp16113G113CGgtTgt11AY.4.40.000409
ORF1ab/nsp16113G113CGgtTgt11AY.4.50.000107
ORF1ab/nsp16113G113VgGtgTt11AY.4.50.000107
ORF1ab/nsp16113G113delGGT---11AY.430.000004
ORF1ab/nsp16113G113del1GGTAA-11AY.440.000006
ORF1ab/nsp16113G113SGgtAgt11AY.46.40.000165
ORF1ab/nsp16113G113GggTggC11AY.46.40.000165
ORF1ab/nsp16113G113CGgtTgt11AY.5.40.000277
ORF1ab/nsp16113G113CGgtTgt11AY.590.00053
ORF1ab/nsp16113G113VgGtgTt11AY.630.000387
ORF1ab/nsp16113G113CGgtTgt11AY.630.000387
ORF1ab/nsp16113G113CGgtTgt11AY.650.000533
ORF1ab/nsp16113G113SGgtAgt11AY.680.000274
ORF1ab/nsp16113G113CGgtTgt11AY.740.000116
ORF1ab/nsp16113G113CGgtTgt11AY.900.000684
ORF1ab/nsp16113G113GggTggC11AY.920.000287
ORF1ab/nsp16113G113SGgtAgt11AY.920.000287
ORF1ab/nsp16113G113CGgtTgt11AY.930.000273
ORF1ab/nsp16113G113VgGtgTt11AY.940.000443
ORF1ab/nsp16113G113GggTggC11AZ.20.000821
ORF1ab/nsp16113G113delGGT---11B.10.000009
ORF1ab/nsp16113G113RGgtCgt11B.10.000009
ORF1ab/nsp16113G113DgGtgAt11B.10.000009
ORF1ab/nsp16113G113CGgtTgt11B.1.1.1320.014925
ORF1ab/nsp16113G113delGGT---11B.1.1.1590.004673
ORF1ab/nsp16113G113CGgtTgt11B.1.1.2160.00089
ORF1ab/nsp16113G113CGgtTgt11B.1.1.2190.005
ORF1ab/nsp16113G113del1Ggt-gt11B.1.1.2220.000204
ORF1ab/nsp16113G113VgGtgTt11B.1.1.2220.000204
ORF1ab/nsp16113G113CGgtTgt11B.1.1.2220.000204
ORF1ab/nsp16113G113CGgtTgt11B.1.1.2690.001353
ORF1ab/nsp16113G113CGgtTgt11B.1.1.2790.001121
ORF1ab/nsp16113G113CGgtTgt11B.1.1.280.000311
ORF1ab/nsp16113G113CGgtTgt11B.1.1.3060.000438
ORF1ab/nsp16113G113SGgtAgt11B.1.1.3770.001381
ORF1ab/nsp16113G113CGgtTgt11B.1.1.3890.006061
ORF1ab/nsp16113G113CGgtTgt11B.1.1.3910.008547
ORF1ab/nsp16113G113SGgtAgt11B.1.1.3980.003226
ORF1ab/nsp16113G113GggTggC11B.1.1.5070.008696
ORF1ab/nsp16113G113SGgtAgt11B.1.1.5280.004808
ORF1ab/nsp16113G113NGGtAAt11B.1.1.70.000001
ORF1ab/nsp16113G113AgGtgCt11B.1.1.70.000001
ORF1ab/nsp16113G113delGGT---11B.1.1.700.000341
ORF1ab/nsp16113G113CGgtTgt11B.1.1.80.003584
ORF1ab/nsp16113G113CGgtTgt11B.1.1.990.02381
ORF1ab/nsp16113G113AgGtgCt11B.1.1600.000031
ORF1ab/nsp16113G113GggTggC11B.1.1600.000031
ORF1ab/nsp16113G113VgGtgTt11B.1.1600.000031
ORF1ab/nsp16113G113del1Ggt-gt11B.1.160.70.002079
ORF1ab/nsp16113G113GggTggC11B.1.1770.000013
ORF1ab/nsp16113G113AgGtgCt11B.1.177.210.000076
ORF1ab/nsp16113G113SGgtAgt11B.1.177.230.003236
ORF1ab/nsp16113G113GggTggC11B.1.177.310.011494
ORF1ab/nsp16113G113VgGtgTt11B.1.177.320.00135
ORF1ab/nsp16113G113CGgtTgt11B.1.177.320.00135
ORF1ab/nsp16113G113CGgtTgt11B.1.177.40.000211
ORF1ab/nsp16113G113GggTggG11B.1.177.440.000519
ORF1ab/nsp16113G113CGgtTgt11B.1.177.580.001332
ORF1ab/nsp16113G113delGGT---11B.1.177.620.001192
ORF1ab/nsp16113G113RGgtCgt11B.1.177.650.000665
ORF1ab/nsp16113G113VgGtgTt11B.1.177.70.000165
ORF1ab/nsp16113G113del1ggTgg-11B.1.177.70.000165
ORF1ab/nsp16113G113VgGtgTt11B.1.177.80.000752
ORF1ab/nsp16113G113SGgtAgt11B.1.177.820.000477
ORF1ab/nsp16113G113delGGT---11B.1.177.90.001332
ORF1ab/nsp16113G113GggTggC11B.1.20.000009
ORF1ab/nsp16113G113CGgtTgt11B.1.214.10.02
ORF1ab/nsp16113G113CGgtTgt11B.1.2210.000071
ORF1ab/nsp16113G113CGgtTgt11B.1.230.006061
ORF1ab/nsp16113G113VgGtgTt11B.1.2360.002053
ORF1ab/nsp16113G113CGgtTgt11B.1.2410.000812
ORF1ab/nsp16113G113delGGT---11B.1.2580.000067
ORF1ab/nsp16113G113delGGT---11B.1.258.110.000396
ORF1ab/nsp16113G113AgGtgCt11B.1.3050.002151
ORF1ab/nsp16113G113GggTggA11B.1.3500.002933
ORF1ab/nsp16113G113GggTggC11B.1.3510.00003
ORF1ab/nsp16113G113CGgtTgt11B.1.351.20.000303
ORF1ab/nsp16113G113VgGtgTt11B.1.360.000146
ORF1ab/nsp16113G113AgGtgCt11B.1.36.160.001425
ORF1ab/nsp16113G113VgGtgTt11B.1.36.350.002604
ORF1ab/nsp16113G113CGgtTgt11B.1.36.90.003215
ORF1ab/nsp16113G113GggTggC11B.1.4250.002994
ORF1ab/nsp16113G113VgGtgTt11B.1.4270.00005
ORF1ab/nsp16113G113VgGtgTt11B.1.4290.000024
ORF1ab/nsp16113G113CGgtTgt11B.1.4330.003195
ORF1ab/nsp16113G113CGgtTgt11B.1.466.20.000391
ORF1ab/nsp16113G113GggTggC11B.1.4690.00361
ORF1ab/nsp16113G113CGgtTgt11B.1.4800.002488
ORF1ab/nsp16113G113CGgtTgt11B.1.5090.000866
ORF1ab/nsp16113G113delGGT---11B.1.5250.000113
ORF1ab/nsp16113G113CGgtTgt11B.1.5250.000113
ORF1ab/nsp16113G113CGgtTgt11B.1.5610.000397
ORF1ab/nsp16113G113SGgtAgt11B.1.5680.001111
ORF1ab/nsp16113G113SGgtAgt11B.1.5760.000907
ORF1ab/nsp16113G113CGgtTgt11B.1.5770.000687
ORF1ab/nsp16113G113CGgtTgt11B.1.5820.000491
ORF1ab/nsp16113G113GggTggC11B.1.5950.000261
ORF1ab/nsp16113G113CGgtTgt11B.1.617.10.000129
ORF1ab/nsp16113G113del1GgTTg-11B.1.617.20.000004
ORF1ab/nsp16113G113delGGT---11B.1.6200.000946
ORF1ab/nsp16113G113CGgtTgt11C.390.018868
ORF1ab/nsp16113G113SGgtAgt11D.20.000075
ORF1ab/nsp16113G113SGgtAgt11P.10.000016
ORF1ab/nsp16113G113GggTggC11P.10.000016
ORF1ab/nsp16113G113SGgtAgt11P.1.120.000484
ORF1ab/nsp16113G113GggTggC11P.1.150.000232
ORF1ab/nsp16113G113CGgtTgt11P.1.160.000374
ORF1ab/nsp16113G113CGgtTgt11P.1.90.004808
ORF1ab/nsp16113G113SGgtAgt11P.20.000187
ORF1ab/nsp16113G113CGgtTgt11P.30.001595
ORF1ab/nsp16113G113delGGT---11Q.20.000613
ORF1ab/nsp16113G113VgGtgTt11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.