CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 102 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16102D102DD6900DsyngaCgaT587587120962-20964

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16102D102DgaCgaT587587All0.000112
ORF1ab/nsp16102D102DgaCgaT168168B.1.1.70.00015
ORF1ab/nsp16102D102DgaCgaT4040AY.40.000062
ORF1ab/nsp16102D102DgaCgaT3434AY.430.000151
ORF1ab/nsp16102D102DgaCgaT3333A.2.50.016467
ORF1ab/nsp16102D102DgaCgaT2727B.1.617.20.000102
ORF1ab/nsp16102D102DgaCgaT1919AY.250.000114
ORF1ab/nsp16102D102DgaCgaT1818AY.1030.000112
ORF1ab/nsp16102D102DgaCgaT1717AY.1100.001916
ORF1ab/nsp16102D102DgaCgaT1717B.1.3510.000505
ORF1ab/nsp16102D102DgaCgaT1616B.1.1.3060.007014
ORF1ab/nsp16102D102DgaCgaT1313AY.750.000728
ORF1ab/nsp16102D102DgaCgaT1212B.1.20.000106
ORF1ab/nsp16102D102DgaCgaT1111AY.440.000067
ORF1ab/nsp16102D102DgaCgaT1111B.10.000101
ORF1ab/nsp16102D102DgaCgaT1010B.1.1.3850.044643
ORF1ab/nsp16102D102DgaCgaT1010B.1.4270.000505
ORF1ab/nsp16102D102DgaCgaT99AY.1020.000239
ORF1ab/nsp16102D102DgaCgaT99AY.60.00037
ORF1ab/nsp16102D102DgaCgaT66AY.30.00006
ORF1ab/nsp16102D102DgaCgaT55AY.1170.000423
ORF1ab/nsp16102D102DgaCgaT55B.1.4290.000118
ORF1ab/nsp16102D102DgaCgaT44B.1.1.3440.043011
ORF1ab/nsp16102D102DgaCgaT33AY.1210.000406
ORF1ab/nsp16102D102DgaCgaT33AY.230.000209
ORF1ab/nsp16102D102DgaCgaT33AY.50.000062
ORF1ab/nsp16102D102DgaCgaT33AY.610.000314
ORF1ab/nsp16102D102DgaCgaT33B.1.10.000054
ORF1ab/nsp16102D102DgaCgaT33B.1.1600.000094
ORF1ab/nsp16102D102DgaCgaT33B.1.5260.000071
ORF1ab/nsp16102D102DgaCgaT22AY.1000.000092
ORF1ab/nsp16102D102DgaCgaT22AY.130.000322
ORF1ab/nsp16102D102DgaCgaT22AY.200.000078
ORF1ab/nsp16102D102DgaCgaT22AY.290.000032
ORF1ab/nsp16102D102DgaCgaT22AY.39.10.000079
ORF1ab/nsp16102D102DgaCgaT22AY.780.003082
ORF1ab/nsp16102D102DgaCgaT22AY.980.000158
ORF1ab/nsp16102D102DgaCgaT22B0.000256
ORF1ab/nsp16102D102DgaCgaT22B.1.1.5190.000079
ORF1ab/nsp16102D102DgaCgaT22B.1.617.10.000258
ORF1ab/nsp16102D102DgaCgaT22B.1.6370.000146
ORF1ab/nsp16102D102DgaCgaT22B.6.60.001778
ORF1ab/nsp16102D102DgaCgaT22D.20.00015
ORF1ab/nsp16102D102DgaCgaT22P.10.000032
ORF1ab/nsp16102D102DgaCgaT110.055556
ORF1ab/nsp16102D102DgaCgaT11A.10.000282
ORF1ab/nsp16102D102DgaCgaT11AY.116.10.000311
ORF1ab/nsp16102D102DgaCgaT11AY.1180.000063
ORF1ab/nsp16102D102DgaCgaT11AY.1200.000037
ORF1ab/nsp16102D102DgaCgaT11AY.320.000532
ORF1ab/nsp16102D102DgaCgaT11AY.390.000025
ORF1ab/nsp16102D102DgaCgaT11AY.420.00004
ORF1ab/nsp16102D102DgaCgaT11AY.450.000122
ORF1ab/nsp16102D102DgaCgaT11AY.460.000104
ORF1ab/nsp16102D102DgaCgaT11AY.46.50.000198
ORF1ab/nsp16102D102DgaCgaT11AY.46.60.000072
ORF1ab/nsp16102D102DgaCgaT11AY.470.000031
ORF1ab/nsp16102D102DgaCgaT11AY.5.40.000277
ORF1ab/nsp16102D102DgaCgaT11AY.530.000288
ORF1ab/nsp16102D102DgaCgaT11AY.710.000475
ORF1ab/nsp16102D102DgaCgaT11B.1.1.1690.018182
ORF1ab/nsp16102D102DgaCgaT11B.1.1.2050.003717
ORF1ab/nsp16102D102DgaCgaT11B.1.1.250.000569
ORF1ab/nsp16102D102DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp16102D102DgaCgaT11B.1.1.3860.066667
ORF1ab/nsp16102D102DgaCgaT11B.1.1.5180.006329
ORF1ab/nsp16102D102DgaCgaT11B.1.1770.000013
ORF1ab/nsp16102D102DgaCgaT11B.1.177.120.000152
ORF1ab/nsp16102D102DgaCgaT11B.1.177.620.001192
ORF1ab/nsp16102D102DgaCgaT11B.1.2060.000816
ORF1ab/nsp16102D102DgaCgaT11B.1.2320.000537
ORF1ab/nsp16102D102DgaCgaT11B.1.2430.00007
ORF1ab/nsp16102D102DgaCgaT11B.1.258.110.000396
ORF1ab/nsp16102D102DgaCgaT11B.1.350.008475
ORF1ab/nsp16102D102DgaCgaT11B.1.3560.001727
ORF1ab/nsp16102D102DgaCgaT11B.1.36.10.00114
ORF1ab/nsp16102D102DgaCgaT11B.1.36.260.002857
ORF1ab/nsp16102D102DgaCgaT11B.1.4110.003704
ORF1ab/nsp16102D102DgaCgaT11B.1.4560.003268
ORF1ab/nsp16102D102DgaCgaT11B.1.4690.00361
ORF1ab/nsp16102D102DgaCgaT11B.1.5250.000113
ORF1ab/nsp16102D102DgaCgaT11B.1.5640.000426
ORF1ab/nsp16102D102DgaCgaT11B.1.5770.000687
ORF1ab/nsp16102D102DgaCgaT11B.1.5960.000087
ORF1ab/nsp16102D102DgaCgaT11B.1.6090.000479
ORF1ab/nsp16102D102DgaCgaT11C.370.000116
ORF1ab/nsp16102D102DgaCgaT11P.1.140.000048
ORF1ab/nsp16102D102DgaCgaT11Q.10.000126