CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 1 & Codon = Gct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp161S1AS6799AnonsynTctGct8888120659-20661

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp161S1ATctGct8888All0.000017
ORF1ab/nsp161S1ATctGct2525AY.40.000039
ORF1ab/nsp161S1ATctGct2424B.1.1.70.000021
ORF1ab/nsp161S1ATctGct77B.1.617.20.000026
ORF1ab/nsp161S1ATctGct44AY.440.000024
ORF1ab/nsp161S1ATctGct33A0.001161
ORF1ab/nsp161S1ATctGct33AY.430.000013
ORF1ab/nsp161S1ATctGct33B.1.177.70.000495
ORF1ab/nsp161S1ATctGct22AY.39.10.000079
ORF1ab/nsp161S1ATctGct22B.10.000018
ORF1ab/nsp161S1ATctGct22P.10.000032
ORF1ab/nsp161S1ATctGct11AY.1030.000006
ORF1ab/nsp161S1ATctGct11AY.250.000006
ORF1ab/nsp161S1ATctGct11AY.270.000065
ORF1ab/nsp161S1ATctGct11AY.34.10.00051
ORF1ab/nsp161S1ATctGct11AY.450.000122
ORF1ab/nsp161S1ATctGct11AY.470.000031
ORF1ab/nsp161S1ATctGct11AY.50.000021
ORF1ab/nsp161S1ATctGct11AY.99.10.001553
ORF1ab/nsp161S1ATctGct11B.1.1.330.000421
ORF1ab/nsp161S1ATctGct11B.1.1390.000733
ORF1ab/nsp161S1ATctGct11B.1.20.000009
ORF1ab/nsp161S1ATctGct11B.1.2430.00007
ORF1ab/nsp161S1ATctGct11B.1.36.250.002208