CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = Y88Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B88Y88YY6540YsyntaCtaT55945594119882-19884

Details of the mutation Y88Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B88Y88YtaCtaT55945594All0.00107
ORF1ab/nsp15A1-B88Y88YtaCtaT16491649B.1.1.70.001476
ORF1ab/nsp15A1-B88Y88YtaCtaT575575AY.40.000895
ORF1ab/nsp15A1-B88Y88YtaCtaT316316B.1.20.002782
ORF1ab/nsp15A1-B88Y88YtaCtaT234234AY.60.009624
ORF1ab/nsp15A1-B88Y88YtaCtaT177177AY.440.001077
ORF1ab/nsp15A1-B88Y88YtaCtaT155155AY.1030.000962
ORF1ab/nsp15A1-B88Y88YtaCtaT153153B.1.617.20.000576
ORF1ab/nsp15A1-B88Y88YtaCtaT141141B.1.1.4200.141851
ORF1ab/nsp15A1-B88Y88YtaCtaT125125AY.430.000554
ORF1ab/nsp15A1-B88Y88YtaCtaT104104B.1.177.600.022717
ORF1ab/nsp15A1-B88Y88YtaCtaT9292P.10.001449
ORF1ab/nsp15A1-B88Y88YtaCtaT8888B.10.000806
ORF1ab/nsp15A1-B88Y88YtaCtaT8686B.1.177.210.006576
ORF1ab/nsp15A1-B88Y88YtaCtaT8585AY.1090.06287
ORF1ab/nsp15A1-B88Y88YtaCtaT6969B.1.10.001252
ORF1ab/nsp15A1-B88Y88YtaCtaT6969B.1.5820.033857
ORF1ab/nsp15A1-B88Y88YtaCtaT6161B.1.5260.001434
ORF1ab/nsp15A1-B88Y88YtaCtaT6060AY.30.000597
ORF1ab/nsp15A1-B88Y88YtaCtaT5252AY.250.000313
ORF1ab/nsp15A1-B88Y88YtaCtaT4949AY.1020.001299
ORF1ab/nsp15A1-B88Y88YtaCtaT4242B.1.2771
ORF1ab/nsp15A1-B88Y88YtaCtaT4141AY.260.001161
ORF1ab/nsp15A1-B88Y88YtaCtaT3838AW.10.115854
ORF1ab/nsp15A1-B88Y88YtaCtaT3737C.370.004294
ORF1ab/nsp15A1-B88Y88YtaCtaT3535B.1.3510.00104
ORF1ab/nsp15A1-B88Y88YtaCtaT3232AY.1190.00113
ORF1ab/nsp15A1-B88Y88YtaCtaT2828B.1.177.70.004616
ORF1ab/nsp15A1-B88Y88YtaCtaT2828B.1.2340.003694
ORF1ab/nsp15A1-B88Y88YtaCtaT2727B.1.1770.000356
ORF1ab/nsp15A1-B88Y88YtaCtaT2727B.1.36.290.013968
ORF1ab/nsp15A1-B88Y88YtaCtaT2626B.1.1600.000811
ORF1ab/nsp15A1-B88Y88YtaCtaT2626B.1.177.440.013492
ORF1ab/nsp15A1-B88Y88YtaCtaT2525B.1.617.10.003224
ORF1ab/nsp15A1-B88Y88YtaCtaT2424R.10.00216
ORF1ab/nsp15A1-B88Y88YtaCtaT2121AY.200.000816
ORF1ab/nsp15A1-B88Y88YtaCtaT2121AY.460.002186
ORF1ab/nsp15A1-B88Y88YtaCtaT2121B.1.1.5190.000834
ORF1ab/nsp15A1-B88Y88YtaCtaT1919B.1.2580.001264
ORF1ab/nsp15A1-B88Y88YtaCtaT1919B.1.6210.001682
ORF1ab/nsp15A1-B88Y88YtaCtaT1818B.1.4290.000424
ORF1ab/nsp15A1-B88Y88YtaCtaT1717AY.420.000684
ORF1ab/nsp15A1-B88Y88YtaCtaT1717B.1.2430.001183
ORF1ab/nsp15A1-B88Y88YtaCtaT1717B.1.36.170.008399
ORF1ab/nsp15A1-B88Y88YtaCtaT1717B.1.5880.015469
ORF1ab/nsp15A1-B88Y88YtaCtaT1616AY.1180.001002
ORF1ab/nsp15A1-B88Y88YtaCtaT1616AY.350.003729
ORF1ab/nsp15A1-B88Y88YtaCtaT1616AY.9.20.000588
ORF1ab/nsp15A1-B88Y88YtaCtaT1616B.1.2390.019536
ORF1ab/nsp15A1-B88Y88YtaCtaT1515AY.390.000371
ORF1ab/nsp15A1-B88Y88YtaCtaT1414AY.290.000221
ORF1ab/nsp15A1-B88Y88YtaCtaT1414P.20.002613
ORF1ab/nsp15A1-B88Y88YtaCtaT1212AY.330.000801
ORF1ab/nsp15A1-B88Y88YtaCtaT1212AY.4.20.00026
ORF1ab/nsp15A1-B88Y88YtaCtaT1111P.1.70.003512
ORF1ab/nsp15A1-B88Y88YtaCtaT1010AY.470.000311
ORF1ab/nsp15A1-B88Y88YtaCtaT1010B.1.5170.00427
ORF1ab/nsp15A1-B88Y88YtaCtaT99B.1.1.3170.003705
ORF1ab/nsp15A1-B88Y88YtaCtaT99B.1.2400.00194
ORF1ab/nsp15A1-B88Y88YtaCtaT99B.1.360.001313
ORF1ab/nsp15A1-B88Y88YtaCtaT99B.1.5960.000784
ORF1ab/nsp15A1-B88Y88YtaCtaT88AY.1000.000368
ORF1ab/nsp15A1-B88Y88YtaCtaT88AY.1200.000297
ORF1ab/nsp15A1-B88Y88YtaCtaT88AY.75.10.001442
ORF1ab/nsp15A1-B88Y88YtaCtaT88AY.830.013793
ORF1ab/nsp15A1-B88Y88YtaCtaT88B.1.1.2070.009456
ORF1ab/nsp15A1-B88Y88YtaCtaT88B.1.1.2190.04
ORF1ab/nsp15A1-B88Y88YtaCtaT88B.1.2320.004299
ORF1ab/nsp15A1-B88Y88YtaCtaT77AY.1170.000592
ORF1ab/nsp15A1-B88Y88YtaCtaT77AY.3.10.000597
ORF1ab/nsp15A1-B88Y88YtaCtaT77AY.590.003708
ORF1ab/nsp15A1-B88Y88YtaCtaT77B.1.258.170.000728
ORF1ab/nsp15A1-B88Y88YtaCtaT77B.1.4000.003003
ORF1ab/nsp15A1-B88Y88YtaCtaT77B.1.5250.000792
ORF1ab/nsp15A1-B88Y88YtaCtaT77Q.80.001154
ORF1ab/nsp15A1-B88Y88YtaCtaT66AY.1130.000854
ORF1ab/nsp15A1-B88Y88YtaCtaT66AY.620.002614
ORF1ab/nsp15A1-B88Y88YtaCtaT66AY.630.002321
ORF1ab/nsp15A1-B88Y88YtaCtaT66B.1.1.280.001867
ORF1ab/nsp15A1-B88Y88YtaCtaT66B.1.1.3890.036364
ORF1ab/nsp15A1-B88Y88YtaCtaT66B.1.177.40.001266
ORF1ab/nsp15A1-B88Y88YtaCtaT66B.1.3110.001647
ORF1ab/nsp15A1-B88Y88YtaCtaT66B.1.6280.002114
ORF1ab/nsp15A1-B88Y88YtaCtaT66P.1.130.005391
ORF1ab/nsp15A1-B88Y88YtaCtaT55AY.230.000349
ORF1ab/nsp15A1-B88Y88YtaCtaT55AY.46.60.000361
ORF1ab/nsp15A1-B88Y88YtaCtaT55AY.690.000933
ORF1ab/nsp15A1-B88Y88YtaCtaT55B.1.1.2840.000537
ORF1ab/nsp15A1-B88Y88YtaCtaT55B.1.2210.000355
ORF1ab/nsp15A1-B88Y88YtaCtaT55P.1.140.000239
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.140.000352
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.160.001519
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.190.004561
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.270.000259
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.320.00213
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.360.000593
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.450.000487
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.50.000083
ORF1ab/nsp15A1-B88Y88YtaCtaT44AY.90.00027
ORF1ab/nsp15A1-B88Y88YtaCtaT44B.1.1.2140.000222
ORF1ab/nsp15A1-B88Y88YtaCtaT44B.1.1080.023256
ORF1ab/nsp15A1-B88Y88YtaCtaT44B.1.243.10.088889
ORF1ab/nsp15A1-B88Y88YtaCtaT44B.1.5950.001044
ORF1ab/nsp15A1-B88Y88YtaCtaT33AY.46.40.000494
ORF1ab/nsp15A1-B88Y88YtaCtaT33AY.610.000314
ORF1ab/nsp15A1-B88Y88YtaCtaT33AY.770.003382
ORF1ab/nsp15A1-B88Y88YtaCtaT33B.1.1.2220.000612
ORF1ab/nsp15A1-B88Y88YtaCtaT33B.1.1.880.214286
ORF1ab/nsp15A1-B88Y88YtaCtaT33B.1.36.350.007812
ORF1ab/nsp15A1-B88Y88YtaCtaT33B.1.4270.000151
ORF1ab/nsp15A1-B88Y88YtaCtaT33B.1.6020.019608
ORF1ab/nsp15A1-B88Y88YtaCtaT33B.1.6320.020134
ORF1ab/nsp15A1-B88Y88YtaCtaT33D.20.000225
ORF1ab/nsp15A1-B88Y88YtaCtaT33Q.10.000379
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.1210.000271
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.130.000322
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.340.000194
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.4.40.000818
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.4.50.000215
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.410.000588
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.540.000191
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.640.00119
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.700.000417
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.750.000112
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.9.10.000167
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.910.001461
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.940.000885
ORF1ab/nsp15A1-B88Y88YtaCtaT22AY.98.10.000097
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.1890.003026
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.2160.001781
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.2770.001517
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.3180.000604
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.3480.001592
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.3540.008772
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.3720.001377
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.5230.003125
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.1.5260.007092
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.177.810.000379
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.177.860.000367
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.351.20.000605
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.466.20.000782
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.5760.001813
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.621.10.001012
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.1.6230.001073
ORF1ab/nsp15A1-B88Y88YtaCtaT22B.4.50.02381
ORF1ab/nsp15A1-B88Y88YtaCtaT22C.140.008658
ORF1ab/nsp15A1-B88Y88YtaCtaT22C.300.003454
ORF1ab/nsp15A1-B88Y88YtaCtaT11A.10.000282
ORF1ab/nsp15A1-B88Y88YtaCtaT11A.23.10.000704
ORF1ab/nsp15A1-B88Y88YtaCtaT11A.250.018182
ORF1ab/nsp15A1-B88Y88YtaCtaT11A.300.142857
ORF1ab/nsp15A1-B88Y88YtaCtaT11A.50.001923
ORF1ab/nsp15A1-B88Y88YtaCtaT11AD.20.000219
ORF1ab/nsp15A1-B88Y88YtaCtaT11AE.10.011364
ORF1ab/nsp15A1-B88Y88YtaCtaT11AM.10.111111
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.100.00053
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.110.001339
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.1100.000113
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.1160.000287
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.240.000431
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.300.000396
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.380.000499
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.39.10.00004
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.5.30.000337
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.510.000909
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.550.000917
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.650.000533
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.670.000464
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.70.000196
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.7.20.000559
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.710.000475
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.840.000437
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.850.000427
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.860.00083
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.880.000884
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.930.000273
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.980.000079
ORF1ab/nsp15A1-B88Y88YtaCtaT11AY.99.20.000092
ORF1ab/nsp15A1-B88Y88YtaCtaT11B0.000128
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.130.035714
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.1740.003378
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.250.000569
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.2880.001916
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.3160.000925
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.3430.020833
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.3690.000446
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.370.000193
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.390.00051
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.4220.045455
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.4340.000349
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.440.00241
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.500.000679
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.5210.005348
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1.700.000341
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.160.200.008929
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.160.300.002976
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.160.80.001289
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.160.90.007194
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.177.150.000631
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.177.170.000821
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.177.550.002331
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.177.570.000281
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.177.730.000566
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.1990.004132
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.220.001318
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.2370.004975
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.258.20.004505
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.2650.001271
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.3490.000715
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.351.30.000876
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.351.50.0006
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.36.160.001425
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.36.360.000602
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.3960.000706
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.4200.010417
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.4260.001009
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.438.10.000107
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.4650.003802
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.4660.023256
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.5230.002451
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.5750.000303
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.5870.001898
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.6090.000479
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.6120.002653
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.6270.00202
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.6300.005236
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.6310.003367
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.6370.000073
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.88.10.004808
ORF1ab/nsp15A1-B88Y88YtaCtaT11B.1.930.000934
ORF1ab/nsp15A1-B88Y88YtaCtaT11C.350.000774
ORF1ab/nsp15A1-B88Y88YtaCtaT11N.10.016949
ORF1ab/nsp15A1-B88Y88YtaCtaT11N.60.007092
ORF1ab/nsp15A1-B88Y88YtaCtaT11P.1.10.000318
ORF1ab/nsp15A1-B88Y88YtaCtaT11P.1.120.000484
ORF1ab/nsp15A1-B88Y88YtaCtaT11P.1.150.000232
ORF1ab/nsp15A1-B88Y88YtaCtaT11P.1.170.000162
ORF1ab/nsp15A1-B88Y88YtaCtaT11P.1.20.001156
ORF1ab/nsp15A1-B88Y88YtaCtaT11Q.40.000455
ORF1ab/nsp15A1-B88Y88YtaCtaT11U.20.008772