CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = V172L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B172V172LV6624LnonsynGtaTta436943390.99313320134-20136
ORF1ab/nsp15A1-B172V172LV6624LnonsynGtaCta4369290.0066376720134-20136
ORF1ab/nsp15A1-B172V172LV6624LnonsynGtACtT436910.00022888520134-20136

Details of the mutation V172L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B172V172LGtaTta43394369All0.00083
ORF1ab/nsp15A1-B172V172LGtaCta294369All0.000006
ORF1ab/nsp15A1-B172V172LGtACtT14369All0
ORF1ab/nsp15A1-B172V172LGtaTta11171118AY.40.001739
ORF1ab/nsp15A1-B172V172LGtaCta11118AY.40.000002
ORF1ab/nsp15A1-B172V172LGtaTta422431B.1.1.70.000378
ORF1ab/nsp15A1-B172V172LGtaCta9431B.1.1.70.000008
ORF1ab/nsp15A1-B172V172LGtaTta218218AY.1030.001354
ORF1ab/nsp15A1-B172V172LGtaTta188188A.60.964103
ORF1ab/nsp15A1-B172V172LGtaTta184184AY.200.007151
ORF1ab/nsp15A1-B172V172LGtaTta133133AY.430.000589
ORF1ab/nsp15A1-B172V172LGtaTta121121B.1.1.580.650538
ORF1ab/nsp15A1-B172V172LGtaTta117117B.1.1.2940.148101
ORF1ab/nsp15A1-B172V172LGtaTta9798B.10.000888
ORF1ab/nsp15A1-B172V172LGtaCta198B.10.000009
ORF1ab/nsp15A1-B172V172LGtaTta8182AY.250.000487
ORF1ab/nsp15A1-B172V172LGtaCta182AY.250.000006
ORF1ab/nsp15A1-B172V172LGtaTta7979B.1.617.20.000297
ORF1ab/nsp15A1-B172V172LGtaTta7474AY.440.00045
ORF1ab/nsp15A1-B172V172LGtaTta7073B.1.1770.000922
ORF1ab/nsp15A1-B172V172LGtaCta273B.1.1770.000026
ORF1ab/nsp15A1-B172V172LGtACtT173B.1.1770.000013
ORF1ab/nsp15A1-B172V172LGtaTta5968B.1.20.00052
ORF1ab/nsp15A1-B172V172LGtaCta968B.1.20.000079
ORF1ab/nsp15A1-B172V172LGtaTta5858P.10.000914
ORF1ab/nsp15A1-B172V172LGtaTta5252B.1.177.210.003976
ORF1ab/nsp15A1-B172V172LGtaTta4545AY.740.005204
ORF1ab/nsp15A1-B172V172LGtaTta4040AY.30.000398
ORF1ab/nsp15A1-B172V172LGtaTta4040B.1.1.3020.082988
ORF1ab/nsp15A1-B172V172LGtaTta3536AY.1020.000928
ORF1ab/nsp15A1-B172V172LGtaCta136AY.1020.000027
ORF1ab/nsp15A1-B172V172LGtaTta3636AY.90.002433
ORF1ab/nsp15A1-B172V172LGtaTta3535B.1.1.100.039019
ORF1ab/nsp15A1-B172V172LGtaTta3535B.1.1.2140.001941
ORF1ab/nsp15A1-B172V172LGtaTta3333B.1.5260.000776
ORF1ab/nsp15A1-B172V172LGtaTta3232AZ.10.027754
ORF1ab/nsp15A1-B172V172LGtaTta3030B.1.4290.000706
ORF1ab/nsp15A1-B172V172LGtaTta2828AY.780.043143
ORF1ab/nsp15A1-B172V172LGtaTta2627AY.330.001736
ORF1ab/nsp15A1-B172V172LGtaCta127AY.330.000067
ORF1ab/nsp15A1-B172V172LGtaTta2525B.1.1.5190.000993
ORF1ab/nsp15A1-B172V172LGtaTta2424AY.1140.005547
ORF1ab/nsp15A1-B172V172LGtaTta2424P.20.004479
ORF1ab/nsp15A1-B172V172LGtaTta2222B.1.177.520.038664
ORF1ab/nsp15A1-B172V172LGtaTta2121AY.50.000434
ORF1ab/nsp15A1-B172V172LGtaTta2121Q.20.012883
ORF1ab/nsp15A1-B172V172LGtaTta1919AP.10.028529
ORF1ab/nsp15A1-B172V172LGtaTta1819B.1.10.000327
ORF1ab/nsp15A1-B172V172LGtaCta119B.1.10.000018
ORF1ab/nsp15A1-B172V172LGtaTta1616AY.1210.002165
ORF1ab/nsp15A1-B172V172LGtaTta1616AY.610.001676
ORF1ab/nsp15A1-B172V172LGtaTta1515AY.3.10.001279
ORF1ab/nsp15A1-B172V172LGtaTta1515AY.420.000603
ORF1ab/nsp15A1-B172V172LGtaTta1414AY.390.000346
ORF1ab/nsp15A1-B172V172LGtaTta1414B.1.5750.004248
ORF1ab/nsp15A1-B172V172LGtaTta1313B.1.1.250.007391
ORF1ab/nsp15A1-B172V172LGtaTta1212AY.60.000494
ORF1ab/nsp15A1-B172V172LGtaTta1112AY.9.20.000404
ORF1ab/nsp15A1-B172V172LGtaCta112AY.9.20.000037
ORF1ab/nsp15A1-B172V172LGtaTta1112B.1.1600.000343
ORF1ab/nsp15A1-B172V172LGtaCta112B.1.1600.000031
ORF1ab/nsp15A1-B172V172LGtaTta1212B.1.2340.001583
ORF1ab/nsp15A1-B172V172LGtaTta1212Q.10.001516
ORF1ab/nsp15A1-B172V172LGtaTta1111AY.290.000174
ORF1ab/nsp15A1-B172V172LGtaTta1111AY.360.00163
ORF1ab/nsp15A1-B172V172LGtaTta1111AY.4.50.001182
ORF1ab/nsp15A1-B172V172LGtaTta1111B.1.5610.004367
ORF1ab/nsp15A1-B172V172LGtaTta1010AY.470.000311
ORF1ab/nsp15A1-B172V172LGtaTta1010B.1.2430.000696
ORF1ab/nsp15A1-B172V172LGtaTta1010B.1.3510.000297
ORF1ab/nsp15A1-B172V172LGtaTta99AD.20.001971
ORF1ab/nsp15A1-B172V172LGtaTta99AY.1060.003014
ORF1ab/nsp15A1-B172V172LGtaTta99AY.1190.000318
ORF1ab/nsp15A1-B172V172LGtaTta99AY.230.000628
ORF1ab/nsp15A1-B172V172LGtaTta99AY.5.30.003036
ORF1ab/nsp15A1-B172V172LGtaTta99B.1.4270.000454
ORF1ab/nsp15A1-B172V172LGtaTta88AY.1180.000501
ORF1ab/nsp15A1-B172V172LGtaTta88AY.260.000226
ORF1ab/nsp15A1-B172V172LGtaTta88AY.650.004264
ORF1ab/nsp15A1-B172V172LGtaTta88AY.98.10.000387
ORF1ab/nsp15A1-B172V172LGtaTta88B.1.177.150.005047
ORF1ab/nsp15A1-B172V172LGtaTta77AY.1170.000592
ORF1ab/nsp15A1-B172V172LGtaTta77AY.340.000679
ORF1ab/nsp15A1-B172V172LGtaTta77AY.900.004791
ORF1ab/nsp15A1-B172V172LGtaTta77B.1.5250.000792
ORF1ab/nsp15A1-B172V172LGtaTta77B.1.6210.00062
ORF1ab/nsp15A1-B172V172LGtaTta77P.1.170.001132
ORF1ab/nsp15A1-B172V172LGtaTta66AY.4.20.00013
ORF1ab/nsp15A1-B172V172LGtaTta66AY.46.60.000433
ORF1ab/nsp15A1-B172V172LGtaTta66B.1.1.3180.001811
ORF1ab/nsp15A1-B172V172LGtaTta66B.1.5960.000523
ORF1ab/nsp15A1-B172V172LGtaTta55AY.1000.00023
ORF1ab/nsp15A1-B172V172LGtaTta55AY.130.000805
ORF1ab/nsp15A1-B172V172LGtaTta55AY.140.00044
ORF1ab/nsp15A1-B172V172LGtaTta55AY.46.40.000823
ORF1ab/nsp15A1-B172V172LGtaTta55B.1.1.3260.008803
ORF1ab/nsp15A1-B172V172LGtaTta55B.1.177.430.007386
ORF1ab/nsp15A1-B172V172LGtaTta55B.1.2210.000355
ORF1ab/nsp15A1-B172V172LGtaTta44A0.001548
ORF1ab/nsp15A1-B172V172LGtaTta44AY.270.000259
ORF1ab/nsp15A1-B172V172LGtaTta44AY.570.002625
ORF1ab/nsp15A1-B172V172LGtaTta44AY.750.000224
ORF1ab/nsp15A1-B172V172LGtaTta44AY.840.00175
ORF1ab/nsp15A1-B172V172LGtaTta44B.1.160.270.060606
ORF1ab/nsp15A1-B172V172LGtaTta44B.1.2580.000266
ORF1ab/nsp15A1-B172V172LGtaTta44B.1.360.000584
ORF1ab/nsp15A1-B172V172LGtaTta44B.1.4050.049383
ORF1ab/nsp15A1-B172V172LGtaTta44B.1.5880.00364
ORF1ab/nsp15A1-B172V172LGtaTta44B.1.5950.001044
ORF1ab/nsp15A1-B172V172LGtaTta44P.1.140.000191
ORF1ab/nsp15A1-B172V172LGtaTta44Q.50.067797
ORF1ab/nsp15A1-B172V172LGtaTta33AY.1100.000338
ORF1ab/nsp15A1-B172V172LGtaTta33AY.1200.000112
ORF1ab/nsp15A1-B172V172LGtaTta33AY.450.000365
ORF1ab/nsp15A1-B172V172LGtaTta33AY.550.002752
ORF1ab/nsp15A1-B172V172LGtaTta33AY.560.004815
ORF1ab/nsp15A1-B172V172LGtaTta33AY.630.001161
ORF1ab/nsp15A1-B172V172LGtaTta33AY.690.00056
ORF1ab/nsp15A1-B172V172LGtaTta33AY.700.000626
ORF1ab/nsp15A1-B172V172LGtaTta33AY.75.10.000541
ORF1ab/nsp15A1-B172V172LGtaTta33AY.770.003382
ORF1ab/nsp15A1-B172V172LGtaTta33AY.920.000862
ORF1ab/nsp15A1-B172V172LGtaTta33AY.980.000237
ORF1ab/nsp15A1-B172V172LGtaTta33B.1.1.10.00098
ORF1ab/nsp15A1-B172V172LGtaTta33B.1.1.3060.001315
ORF1ab/nsp15A1-B172V172LGtaTta33B.1.1.500.002037
ORF1ab/nsp15A1-B172V172LGtaTta33B.1.258.170.000312
ORF1ab/nsp15A1-B172V172LGtaTta33B.1.4200.03125
ORF1ab/nsp15A1-B172V172LGtaTta33B.1.90.018519
ORF1ab/nsp15A1-B172V172LGtaTta33D.20.000225
ORF1ab/nsp15A1-B172V172LGtaTta22AY.1160.000574
ORF1ab/nsp15A1-B172V172LGtaTta22AY.116.10.000623
ORF1ab/nsp15A1-B172V172LGtaTta22AY.400.001929
ORF1ab/nsp15A1-B172V172LGtaTta22AY.46.50.000397
ORF1ab/nsp15A1-B172V172LGtaTta22AY.540.000191
ORF1ab/nsp15A1-B172V172LGtaTta22AY.680.000547
ORF1ab/nsp15A1-B172V172LGtaTta22AY.710.00095
ORF1ab/nsp15A1-B172V172LGtaTta22AY.99.20.000184
ORF1ab/nsp15A1-B172V172LGtaTta22B0.000256
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.2220.000408
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.280.000622
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.2830.046512
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.2840.000215
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.3690.000892
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.3910.017094
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.1.4340.000697
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.177.790.004684
ORF1ab/nsp15A1-B172V172LGtaCta12B.1.2400.000216
ORF1ab/nsp15A1-B172V172LGtaTta12B.1.2400.000216
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.3330.021053
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.36.240.012346
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.36.310.003503
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.36.80.002
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.3660.009756
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.3690.00057
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.4000.000858
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.438.10.000215
ORF1ab/nsp15A1-B172V172LGtaTta22B.1.4690.00722
ORF1ab/nsp15A1-B172V172LGtaTta22C.360.001821
ORF1ab/nsp15A1-B172V172LGtaTta22C.370.000232
ORF1ab/nsp15A1-B172V172LGtaTta22P.30.00319
ORF1ab/nsp15A1-B172V172LGtaTta22P.70.008734
ORF1ab/nsp15A1-B172V172LGtaTta11A.10.000282
ORF1ab/nsp15A1-B172V172LGtaTta11A.2.50.000499
ORF1ab/nsp15A1-B172V172LGtaTta11AY.10.000396
ORF1ab/nsp15A1-B172V172LGtaTta11AY.1080.001103
ORF1ab/nsp15A1-B172V172LGtaTta11AY.1130.000142
ORF1ab/nsp15A1-B172V172LGtaTta11AY.120.000316
ORF1ab/nsp15A1-B172V172LGtaTta11AY.120.20.001285
ORF1ab/nsp15A1-B172V172LGtaTta11AY.280.00189
ORF1ab/nsp15A1-B172V172LGtaTta11AY.300.000396
ORF1ab/nsp15A1-B172V172LGtaTta11AY.350.000233
ORF1ab/nsp15A1-B172V172LGtaTta11AY.380.000499
ORF1ab/nsp15A1-B172V172LGtaTta11AY.39.10.00004
ORF1ab/nsp15A1-B172V172LGtaTta11AY.39.20.001541
ORF1ab/nsp15A1-B172V172LGtaTta11AY.4.2.10.000149
ORF1ab/nsp15A1-B172V172LGtaTta11AY.4.30.000842
ORF1ab/nsp15A1-B172V172LGtaTta11AY.460.000104
ORF1ab/nsp15A1-B172V172LGtaTta11AY.46.20.000635
ORF1ab/nsp15A1-B172V172LGtaTta11AY.520.000814
ORF1ab/nsp15A1-B172V172LGtaTta11AY.580.000907
ORF1ab/nsp15A1-B172V172LGtaTta11AY.590.00053
ORF1ab/nsp15A1-B172V172LGtaTta11AY.640.000595
ORF1ab/nsp15A1-B172V172LGtaTta11AY.660.00107
ORF1ab/nsp15A1-B172V172LGtaTta11AY.730.000665
ORF1ab/nsp15A1-B172V172LGtaTta11AY.790.001211
ORF1ab/nsp15A1-B172V172LGtaTta11AY.860.00083
ORF1ab/nsp15A1-B172V172LGtaTta11AY.870.000833
ORF1ab/nsp15A1-B172V172LGtaTta11AY.880.000884
ORF1ab/nsp15A1-B172V172LGtaTta11AY.9.10.000084
ORF1ab/nsp15A1-B172V172LGtaTta11AY.99.10.001553
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.1280.007092
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.1610.003534
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.2750.011236
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.2850.006536
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.3160.000925
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.3170.000412
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.330.000421
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.4200.001006
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.4220.045455
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.5230.001563
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.630.000386
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1.700.000341
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.110.30.000718
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.177.290.066667
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.177.570.000281
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.177.600.000218
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.177.730.000566
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.1990.004132
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.2140.003663
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.2290.009709
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.2370.004975
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.2470.014925
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.2520.006623
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.3050.002151
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.3110.000275
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.3130.006579
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.3360.002439
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.3490.000715
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.351.20.000303
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.36.90.003215
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.3960.000706
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.4280.00102
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.438.20.019231
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.466.20.000391
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.4700.001404
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.4990.00105
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.5200.021739
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.5580.004566
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.575.10.002439
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.6090.000479
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.617.10.000129
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.6270.00202
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.6300.005236
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.760.011364
ORF1ab/nsp15A1-B172V172LGtaTta11B.1.9.40.006135
ORF1ab/nsp15A1-B172V172LGtaTta11B.400.000364
ORF1ab/nsp15A1-B172V172LGtaTta11B.60.00091
ORF1ab/nsp15A1-B172V172LGtaTta11C.36.20.034483
ORF1ab/nsp15A1-B172V172LGtaTta11N.40.004255
ORF1ab/nsp15A1-B172V172LGtaTta11P.1.10.000318
ORF1ab/nsp15A1-B172V172LGtaTta11P.1.160.000374