CoV-GLUE | Mutations | Mutation
CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = V172L
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
| ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
| ORF1ab/nsp15A1-B | 172 | V172L | V6624L | nonsyn | Gta | Tta | 4369 | 4339 | 0.993133 | 20134-20136 |
| ORF1ab/nsp15A1-B | 172 | V172L | V6624L | nonsyn | Gta | Cta | 4369 | 29 | 0.00663767 | 20134-20136 |
| ORF1ab/nsp15A1-B | 172 | V172L | V6624L | nonsyn | GtA | CtT | 4369 | 1 | 0.000228885 | 20134-20136 |
Details of the mutation V172L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
| ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4339 | 4369 | All | 0.00083 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 29 | 4369 | All | 0.000006 |
| ORF1ab/nsp15A1-B | 172 | V172L | GtA | CtT | 1 | 4369 | All | 0 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1117 | 1118 | AY.4 | 0.001739 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 1118 | AY.4 | 0.000002 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 422 | 431 | B.1.1.7 | 0.000378 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 9 | 431 | B.1.1.7 | 0.000008 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 218 | 218 | AY.103 | 0.001354 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 188 | 188 | A.6 | 0.964103 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 184 | 184 | AY.20 | 0.007151 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 133 | 133 | AY.43 | 0.000589 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 121 | 121 | B.1.1.58 | 0.650538 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 117 | 117 | B.1.1.294 | 0.148101 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 97 | 98 | B.1 | 0.000888 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 98 | B.1 | 0.000009 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 81 | 82 | AY.25 | 0.000487 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 82 | AY.25 | 0.000006 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 79 | 79 | B.1.617.2 | 0.000297 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 74 | 74 | AY.44 | 0.00045 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 70 | 73 | B.1.177 | 0.000922 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 2 | 73 | B.1.177 | 0.000026 |
| ORF1ab/nsp15A1-B | 172 | V172L | GtA | CtT | 1 | 73 | B.1.177 | 0.000013 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 59 | 68 | B.1.2 | 0.00052 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 9 | 68 | B.1.2 | 0.000079 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 58 | 58 | P.1 | 0.000914 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 52 | 52 | B.1.177.21 | 0.003976 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 45 | 45 | AY.74 | 0.005204 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 40 | 40 | AY.3 | 0.000398 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 40 | 40 | B.1.1.302 | 0.082988 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 35 | 36 | AY.102 | 0.000928 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 36 | AY.102 | 0.000027 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 36 | 36 | AY.9 | 0.002433 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 35 | 35 | B.1.1.10 | 0.039019 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 35 | 35 | B.1.1.214 | 0.001941 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 33 | 33 | B.1.526 | 0.000776 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 32 | 32 | AZ.1 | 0.027754 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 30 | 30 | B.1.429 | 0.000706 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 28 | 28 | AY.78 | 0.043143 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 26 | 27 | AY.33 | 0.001736 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 27 | AY.33 | 0.000067 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 25 | 25 | B.1.1.519 | 0.000993 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 24 | 24 | AY.114 | 0.005547 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 24 | 24 | P.2 | 0.004479 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 22 | 22 | B.1.177.52 | 0.038664 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 21 | 21 | AY.5 | 0.000434 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 21 | 21 | Q.2 | 0.012883 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 19 | 19 | AP.1 | 0.028529 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 18 | 19 | B.1.1 | 0.000327 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 19 | B.1.1 | 0.000018 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 16 | 16 | AY.121 | 0.002165 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 16 | 16 | AY.61 | 0.001676 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 15 | 15 | AY.3.1 | 0.001279 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 15 | 15 | AY.42 | 0.000603 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 14 | 14 | AY.39 | 0.000346 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 14 | 14 | B.1.575 | 0.004248 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 13 | 13 | B.1.1.25 | 0.007391 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 12 | 12 | AY.6 | 0.000494 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 11 | 12 | AY.9.2 | 0.000404 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 12 | AY.9.2 | 0.000037 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 11 | 12 | B.1.160 | 0.000343 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 12 | B.1.160 | 0.000031 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 12 | 12 | B.1.234 | 0.001583 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 12 | 12 | Q.1 | 0.001516 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 11 | 11 | AY.29 | 0.000174 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 11 | 11 | AY.36 | 0.00163 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 11 | 11 | AY.4.5 | 0.001182 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 11 | 11 | B.1.561 | 0.004367 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 10 | 10 | AY.47 | 0.000311 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 10 | 10 | B.1.243 | 0.000696 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 10 | 10 | B.1.351 | 0.000297 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 9 | 9 | AD.2 | 0.001971 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 9 | 9 | AY.106 | 0.003014 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 9 | 9 | AY.119 | 0.000318 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 9 | 9 | AY.23 | 0.000628 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 9 | 9 | AY.5.3 | 0.003036 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 9 | 9 | B.1.427 | 0.000454 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 8 | 8 | AY.118 | 0.000501 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 8 | 8 | AY.26 | 0.000226 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 8 | 8 | AY.65 | 0.004264 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 8 | 8 | AY.98.1 | 0.000387 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 8 | 8 | B.1.177.15 | 0.005047 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 7 | 7 | AY.117 | 0.000592 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 7 | 7 | AY.34 | 0.000679 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 7 | 7 | AY.90 | 0.004791 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 7 | 7 | B.1.525 | 0.000792 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 7 | 7 | B.1.621 | 0.00062 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 7 | 7 | P.1.17 | 0.001132 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 6 | 6 | AY.4.2 | 0.00013 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 6 | 6 | AY.46.6 | 0.000433 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 6 | 6 | B.1.1.318 | 0.001811 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 6 | 6 | B.1.596 | 0.000523 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | AY.100 | 0.00023 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | AY.13 | 0.000805 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | AY.14 | 0.00044 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | AY.46.4 | 0.000823 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | B.1.1.326 | 0.008803 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | B.1.177.43 | 0.007386 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 5 | 5 | B.1.221 | 0.000355 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | A | 0.001548 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | AY.27 | 0.000259 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | AY.57 | 0.002625 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | AY.75 | 0.000224 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | AY.84 | 0.00175 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | B.1.160.27 | 0.060606 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | B.1.258 | 0.000266 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | B.1.36 | 0.000584 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | B.1.405 | 0.049383 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | B.1.588 | 0.00364 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | B.1.595 | 0.001044 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | P.1.14 | 0.000191 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 4 | 4 | Q.5 | 0.067797 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.110 | 0.000338 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.120 | 0.000112 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.45 | 0.000365 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.55 | 0.002752 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.56 | 0.004815 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.63 | 0.001161 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.69 | 0.00056 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.70 | 0.000626 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.75.1 | 0.000541 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.77 | 0.003382 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.92 | 0.000862 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | AY.98 | 0.000237 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | B.1.1.1 | 0.00098 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | B.1.1.306 | 0.001315 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | B.1.1.50 | 0.002037 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | B.1.258.17 | 0.000312 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | B.1.420 | 0.03125 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | B.1.9 | 0.018519 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 3 | 3 | D.2 | 0.000225 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.116 | 0.000574 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.116.1 | 0.000623 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.40 | 0.001929 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.46.5 | 0.000397 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.54 | 0.000191 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.68 | 0.000547 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.71 | 0.00095 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | AY.99.2 | 0.000184 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B | 0.000256 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.222 | 0.000408 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.28 | 0.000622 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.283 | 0.046512 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.284 | 0.000215 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.369 | 0.000892 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.391 | 0.017094 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.1.434 | 0.000697 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.177.79 | 0.004684 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Cta | 1 | 2 | B.1.240 | 0.000216 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 2 | B.1.240 | 0.000216 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.333 | 0.021053 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.36.24 | 0.012346 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.36.31 | 0.003503 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.36.8 | 0.002 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.366 | 0.009756 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.369 | 0.00057 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.400 | 0.000858 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.438.1 | 0.000215 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | B.1.469 | 0.00722 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | C.36 | 0.001821 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | C.37 | 0.000232 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | P.3 | 0.00319 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 2 | 2 | P.7 | 0.008734 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | A.1 | 0.000282 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | A.2.5 | 0.000499 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.1 | 0.000396 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.108 | 0.001103 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.113 | 0.000142 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.12 | 0.000316 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.120.2 | 0.001285 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.28 | 0.00189 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.30 | 0.000396 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.35 | 0.000233 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.38 | 0.000499 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.39.1 | 0.00004 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.39.2 | 0.001541 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.4.2.1 | 0.000149 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.4.3 | 0.000842 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.46 | 0.000104 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.46.2 | 0.000635 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.52 | 0.000814 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.58 | 0.000907 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.59 | 0.00053 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.64 | 0.000595 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.66 | 0.00107 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.73 | 0.000665 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.79 | 0.001211 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.86 | 0.00083 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.87 | 0.000833 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.88 | 0.000884 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.9.1 | 0.000084 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | AY.99.1 | 0.001553 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.128 | 0.007092 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.161 | 0.003534 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.275 | 0.011236 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.285 | 0.006536 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.316 | 0.000925 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.317 | 0.000412 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.33 | 0.000421 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.420 | 0.001006 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.422 | 0.045455 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.523 | 0.001563 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.63 | 0.000386 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.1.70 | 0.000341 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.110.3 | 0.000718 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.177.29 | 0.066667 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.177.57 | 0.000281 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.177.60 | 0.000218 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.177.73 | 0.000566 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.199 | 0.004132 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.214 | 0.003663 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.229 | 0.009709 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.237 | 0.004975 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.247 | 0.014925 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.252 | 0.006623 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.305 | 0.002151 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.311 | 0.000275 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.313 | 0.006579 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.336 | 0.002439 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.349 | 0.000715 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.351.2 | 0.000303 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.36.9 | 0.003215 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.396 | 0.000706 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.428 | 0.00102 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.438.2 | 0.019231 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.466.2 | 0.000391 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.470 | 0.001404 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.499 | 0.00105 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.520 | 0.021739 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.558 | 0.004566 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.575.1 | 0.002439 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.609 | 0.000479 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.617.1 | 0.000129 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.627 | 0.00202 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.630 | 0.005236 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.76 | 0.011364 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.1.9.4 | 0.006135 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.40 | 0.000364 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | B.6 | 0.00091 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | C.36.2 | 0.034483 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | N.4 | 0.004255 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | P.1.1 | 0.000318 |
| ORF1ab/nsp15A1-B | 172 | V172L | Gta | Tta | 1 | 1 | P.1.16 | 0.000374 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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