CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = V10V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B10V10VV6462VsyngtAgtG9699010.92982519648-19650
ORF1ab/nsp15A1-B10V10VV6462VsyngtAgtT969640.066047519648-19650
ORF1ab/nsp15A1-B10V10VV6462VsyngtAgtC96940.0041279719648-19650

Details of the mutation V10V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B10V10VgtAgtG901969All0.000172
ORF1ab/nsp15A1-B10V10VgtAgtT64969All0.000012
ORF1ab/nsp15A1-B10V10VgtAgtC4969All0.000001
ORF1ab/nsp15A1-B10V10VgtAgtG837845B.1.1.3010.987028
ORF1ab/nsp15A1-B10V10VgtAgtT7845B.1.1.3010.008255
ORF1ab/nsp15A1-B10V10VgtAgtC1845B.1.1.3010.001179
ORF1ab/nsp15A1-B10V10VgtAgtT2828AY.250.000168
ORF1ab/nsp15A1-B10V10VgtAgtG1521B.1.1.70.000013
ORF1ab/nsp15A1-B10V10VgtAgtT621B.1.1.70.000005
ORF1ab/nsp15A1-B10V10VgtAgtG1012B.10.000092
ORF1ab/nsp15A1-B10V10VgtAgtT212B.10.000018
ORF1ab/nsp15A1-B10V10VgtAgtG77AY.230.000488
ORF1ab/nsp15A1-B10V10VgtAgtT56B.1.617.20.000019
ORF1ab/nsp15A1-B10V10VgtAgtG16B.1.617.20.000004
ORF1ab/nsp15A1-B10V10VgtAgtT55B.1.20.000044
ORF1ab/nsp15A1-B10V10VgtAgtG45P.10.000063
ORF1ab/nsp15A1-B10V10VgtAgtT15P.10.000016
ORF1ab/nsp15A1-B10V10VgtAgtG44AY.40.000006
ORF1ab/nsp15A1-B10V10VgtAgtG44AY.440.000024
ORF1ab/nsp15A1-B10V10VgtAgtC33B.1.3510.000089
ORF1ab/nsp15A1-B10V10VgtAgtG22AY.290.000032
ORF1ab/nsp15A1-B10V10VgtAgtG12AY.430.000004
ORF1ab/nsp15A1-B10V10VgtAgtT12AY.430.000004
ORF1ab/nsp15A1-B10V10VgtAgtG22AY.450.000243
ORF1ab/nsp15A1-B10V10VgtAgtG22B.1.10.000036
ORF1ab/nsp15A1-B10V10VgtAgtG22B.1.1600.000062
ORF1ab/nsp15A1-B10V10VgtAgtG22B.1.1770.000026
ORF1ab/nsp15A1-B10V10VgtAgtG22B.1.2580.000133
ORF1ab/nsp15A1-B10V10VgtAgtT22B.610.011494
ORF1ab/nsp15A1-B10V10VgtAgtT110.055556
ORF1ab/nsp15A1-B10V10VgtAgtT11AD.20.000219
ORF1ab/nsp15A1-B10V10VgtAgtG11AY.1190.000035
ORF1ab/nsp15A1-B10V10VgtAgtG11AY.3.10.000085
ORF1ab/nsp15A1-B10V10VgtAgtT11AY.390.000025
ORF1ab/nsp15A1-B10V10VgtAgtG11AY.470.000031
ORF1ab/nsp15A1-B10V10VgtAgtT11AY.610.000105
ORF1ab/nsp15A1-B10V10VgtAgtG11B.1.177.40.000211
ORF1ab/nsp15A1-B10V10VgtAgtT11B.1.2430.00007
ORF1ab/nsp15A1-B10V10VgtAgtG11B.1.360.000146
ORF1ab/nsp15A1-B10V10VgtAgtT11B.1.36.10.00114
ORF1ab/nsp15A1-B10V10VgtAgtG11B.1.3690.000285
ORF1ab/nsp15A1-B10V10VgtAgtT11B.400.000364