CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = V10L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B10V10LV6462LnonsynGtaTta251625070.99642319648-19650
ORF1ab/nsp15A1-B10V10LV6462LnonsynGtaCta251680.0031796519648-19650
ORF1ab/nsp15A1-B10V10LV6462LnonsynGtATtG251610.00039745619648-19650

Details of the mutation V10L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B10V10LGtaTta25072516All0.000479
ORF1ab/nsp15A1-B10V10LGtaCta82516All0.000002
ORF1ab/nsp15A1-B10V10LGtATtG12516All0
ORF1ab/nsp15A1-B10V10LGtaTta444446AY.40.000691
ORF1ab/nsp15A1-B10V10LGtaCta2446AY.40.000003
ORF1ab/nsp15A1-B10V10LGtaTta388388B.1.2350.97733
ORF1ab/nsp15A1-B10V10LGtaTta236236B.1.1.70.000211
ORF1ab/nsp15A1-B10V10LGtaTta153153B.1.177.860.028068
ORF1ab/nsp15A1-B10V10LGtaTta111111B.1.617.20.000418
ORF1ab/nsp15A1-B10V10LGtaTta8282B.1.1.700.027967
ORF1ab/nsp15A1-B10V10LGtaTta8181AY.430.000359
ORF1ab/nsp15A1-B10V10LGtaTta7475B.10.000678
ORF1ab/nsp15A1-B10V10LGtaCta175B.10.000009
ORF1ab/nsp15A1-B10V10LGtaTta5555AY.1030.000341
ORF1ab/nsp15A1-B10V10LGtaTta5353AY.440.000323
ORF1ab/nsp15A1-B10V10LGtaTta5151AY.200.001982
ORF1ab/nsp15A1-B10V10LGtaTta4545AY.50.000929
ORF1ab/nsp15A1-B10V10LGtaTta3535AY.1070.016309
ORF1ab/nsp15A1-B10V10LGtaTta3232AY.250.000192
ORF1ab/nsp15A1-B10V10LGtaTta3232B.1.1.5190.001271
ORF1ab/nsp15A1-B10V10LGtaTta2929B.1.1600.000904
ORF1ab/nsp15A1-B10V10LGtaTta2828P.10.000441
ORF1ab/nsp15A1-B10V10LGtaTta2727AY.60.00111
ORF1ab/nsp15A1-B10V10LGtaTta2323AY.1020.00061
ORF1ab/nsp15A1-B10V10LGtaTta1818AY.30.000179
ORF1ab/nsp15A1-B10V10LGtaTta1818B.1.20.000158
ORF1ab/nsp15A1-B10V10LGtaTta1717P.1.70.005428
ORF1ab/nsp15A1-B10V10LGtaTta1515B.1.10.000272
ORF1ab/nsp15A1-B10V10LGtaTta1515B.1.1490.05137
ORF1ab/nsp15A1-B10V10LGtaTta1515B.1.1770.000198
ORF1ab/nsp15A1-B10V10LGtaTta1313AY.1200.000483
ORF1ab/nsp15A1-B10V10LGtaTta1313AY.130.002093
ORF1ab/nsp15A1-B10V10LGtaTta1111AY.4.20.000239
ORF1ab/nsp15A1-B10V10LGtaTta1010AY.1180.000626
ORF1ab/nsp15A1-B10V10LGtaTta1010AY.390.000247
ORF1ab/nsp15A1-B10V10LGtaTta1010B.1.1.3540.04386
ORF1ab/nsp15A1-B10V10LGtaTta1010B.1.1.630.003858
ORF1ab/nsp15A1-B10V10LGtaTta1010B.1.617.10.00129
ORF1ab/nsp15A1-B10V10LGtaTta99B.1.360.001313
ORF1ab/nsp15A1-B10V10LGtaTta88AY.9.20.000294
ORF1ab/nsp15A1-B10V10LGtaTta77AY.360.001037
ORF1ab/nsp15A1-B10V10LGtaTta77AY.46.50.001389
ORF1ab/nsp15A1-B10V10LGtaTta77B.1.1.370.00135
ORF1ab/nsp15A1-B10V10LGtaTta77B.1.177.730.003964
ORF1ab/nsp15A1-B10V10LGtaTta77B.1.6210.00062
ORF1ab/nsp15A1-B10V10LGtaTta66AY.260.00017
ORF1ab/nsp15A1-B10V10LGtaTta66AY.46.40.000987
ORF1ab/nsp15A1-B10V10LGtaTta66AY.830.010345
ORF1ab/nsp15A1-B10V10LGtaTta66B.1.177.210.000459
ORF1ab/nsp15A1-B10V10LGtaTta66B.1.5090.005195
ORF1ab/nsp15A1-B10V10LGtaTta66B.1.5260.000141
ORF1ab/nsp15A1-B10V10LGtaTta45AY.270.000259
ORF1ab/nsp15A1-B10V10LGtaCta15AY.270.000065
ORF1ab/nsp15A1-B10V10LGtaTta55AY.3.10.000426
ORF1ab/nsp15A1-B10V10LGtaTta55AY.420.000201
ORF1ab/nsp15A1-B10V10LGtaTta55AY.90.000338
ORF1ab/nsp15A1-B10V10LGtaTta55B.1.1.2140.000277
ORF1ab/nsp15A1-B10V10LGtaTta55B.1.1.250.002843
ORF1ab/nsp15A1-B10V10LGtaTta44AY.1090.002959
ORF1ab/nsp15A1-B10V10LGtaTta44AY.1110.000733
ORF1ab/nsp15A1-B10V10LGtaTta44AY.1170.000338
ORF1ab/nsp15A1-B10V10LGtaTta44AY.120.001264
ORF1ab/nsp15A1-B10V10LGtaTta44AY.290.000063
ORF1ab/nsp15A1-B10V10LGtaTta44AY.4.50.00043
ORF1ab/nsp15A1-B10V10LGtaTta44AY.750.000224
ORF1ab/nsp15A1-B10V10LGtaTta44AY.860.00332
ORF1ab/nsp15A1-B10V10LGtaTta44B.1.177.100.003512
ORF1ab/nsp15A1-B10V10LGtaTta44B.1.3510.000119
ORF1ab/nsp15A1-B10V10LGtaTta44B.1.3890.004008
ORF1ab/nsp15A1-B10V10LGtaTta44B.1.4270.000202
ORF1ab/nsp15A1-B10V10LGtaTta44R.10.00036
ORF1ab/nsp15A1-B10V10LGtaTta33AY.1000.000138
ORF1ab/nsp15A1-B10V10LGtaTta33AY.230.000209
ORF1ab/nsp15A1-B10V10LGtaTta33AY.330.0002
ORF1ab/nsp15A1-B10V10LGtaTta33AY.350.000699
ORF1ab/nsp15A1-B10V10LGtaTta33AY.460.000312
ORF1ab/nsp15A1-B10V10LGtaTta33AY.680.000821
ORF1ab/nsp15A1-B10V10LGtaTta33AY.9.10.000251
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.177.60.00293
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.2580.0002
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.258.40.010345
ORF1ab/nsp15A1-B10V10LGtaTta23B.1.36.290.001035
ORF1ab/nsp15A1-B10V10LGtaCta13B.1.36.290.000517
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.36.70.012
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.36.80.003
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.3960.002117
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.4290.000071
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.5170.001281
ORF1ab/nsp15A1-B10V10LGtaTta33B.1.5600.013889
ORF1ab/nsp15A1-B10V10LGtaTta23D.20.00015
ORF1ab/nsp15A1-B10V10LGtaCta13D.20.000075
ORF1ab/nsp15A1-B10V10LGtaTta33Q.50.050847
ORF1ab/nsp15A1-B10V10LGtaTta22AY.1190.000071
ORF1ab/nsp15A1-B10V10LGtaTta22AY.120.20.002571
ORF1ab/nsp15A1-B10V10LGtaTta22AY.16.10.00094
ORF1ab/nsp15A1-B10V10LGtaTta22AY.300.000791
ORF1ab/nsp15A1-B10V10LGtaTta22AY.39.10.000079
ORF1ab/nsp15A1-B10V10LGtaTta22AY.4.30.001684
ORF1ab/nsp15A1-B10V10LGtaTta22AY.46.60.000144
ORF1ab/nsp15A1-B10V10LGtaTta22AY.540.000191
ORF1ab/nsp15A1-B10V10LGtaTta22AY.610.00021
ORF1ab/nsp15A1-B10V10LGtaTta22AY.650.001066
ORF1ab/nsp15A1-B10V10LGtaTta22AY.770.002255
ORF1ab/nsp15A1-B10V10LGtaTta22AY.980.000158
ORF1ab/nsp15A1-B10V10LGtaTta22AY.98.10.000097
ORF1ab/nsp15A1-B10V10LGtaTta22AY.99.10.003106
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.1.2370.010811
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.1.3060.000877
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.177.460.001837
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.2100.004264
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.2410.001623
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.2430.000139
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.2790.001027
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.3130.013158
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.3690.00057
ORF1ab/nsp15A1-B10V10LGtaTta22B.1.5610.000794
ORF1ab/nsp15A1-B10V10LGtaTta22C.230.011628
ORF1ab/nsp15A1-B10V10LGtaTta22C.370.000232
ORF1ab/nsp15A1-B10V10LGtaTta22L.30.007092
ORF1ab/nsp15A1-B10V10LGtaTta22P.1.160.000748
ORF1ab/nsp15A1-B10V10LGtaTta22Q.30.00029
ORF1ab/nsp15A1-B10V10LGtaTta11A0.000387
ORF1ab/nsp15A1-B10V10LGtaTta11A.2.50.000499
ORF1ab/nsp15A1-B10V10LGtaTta11AY.1010.00049
ORF1ab/nsp15A1-B10V10LGtaTta11AY.1040.001984
ORF1ab/nsp15A1-B10V10LGtaTta11AY.1060.000335
ORF1ab/nsp15A1-B10V10LGtaTta11AY.1080.001103
ORF1ab/nsp15A1-B10V10LGtaTta11AY.120.10.000321
ORF1ab/nsp15A1-B10V10LGtaTta11AY.1210.000135
ORF1ab/nsp15A1-B10V10LGtaTta11AY.170.008197
ORF1ab/nsp15A1-B10V10LGtaTta11AY.190.00114
ORF1ab/nsp15A1-B10V10LGtaTta11AY.340.000097
ORF1ab/nsp15A1-B10V10LGtaTta11AY.370.000316
ORF1ab/nsp15A1-B10V10LGtaTta11AY.380.000499
ORF1ab/nsp15A1-B10V10LGtaTta11AY.4.40.000409
ORF1ab/nsp15A1-B10V10LGtaTta11AY.410.000294
ORF1ab/nsp15A1-B10V10LGtaTta11AY.470.000031
ORF1ab/nsp15A1-B10V10LGtaTta11AY.480.000465
ORF1ab/nsp15A1-B10V10LGtaTta11AY.5.30.000337
ORF1ab/nsp15A1-B10V10LGtaTta11AY.530.000288
ORF1ab/nsp15A1-B10V10LGtaTta11AY.70.000196
ORF1ab/nsp15A1-B10V10LGtaTta11AY.740.000116
ORF1ab/nsp15A1-B10V10LGtaTta11AY.790.001211
ORF1ab/nsp15A1-B10V10LGtaTta11AY.820.001357
ORF1ab/nsp15A1-B10V10LGtaTta11AY.840.000437
ORF1ab/nsp15A1-B10V10LGtaTta11AY.99.20.000092
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.10.000327
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.1700.001247
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.2160.00089
ORF1ab/nsp15A1-B10V10LGtaCta11B.1.1.2270.004348
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.2310.003096
ORF1ab/nsp15A1-B10V10LGtATtG11B.1.1.3010.001179
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.3110.000358
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.3180.000302
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.3370.003597
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.390.00051
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1.4640.001473
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1110.001175
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.1240.007812
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.177.560.000668
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.177.70.000165
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.177.810.000189
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.2340.000132
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.2840.013158
ORF1ab/nsp15A1-B10V10LGtaCta11B.1.3250.006897
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.3320.003497
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.36.100.004785
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.3670.000792
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.3990.001934
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.466.20.000391
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.5250.000113
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.5740.002151
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.5880.00091
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.5960.000087
ORF1ab/nsp15A1-B10V10LGtaTta11B.1.6230.000536
ORF1ab/nsp15A1-B10V10LGtaTta11B.30.000831
ORF1ab/nsp15A1-B10V10LGtaTta11C.60.037037
ORF1ab/nsp15A1-B10V10LGtaTta11P.1.100.000269
ORF1ab/nsp15A1-B10V10LGtaTta11P.1.110.010204
ORF1ab/nsp15A1-B10V10LGtaTta11P.1.140.000048
ORF1ab/nsp15A1-B10V10LGtaTta11P.20.000187
ORF1ab/nsp15A1-B10V10LGtaTta11P.30.001595
ORF1ab/nsp15A1-B10V10LGtaTta11Q.10.000126
ORF1ab/nsp15A1-B10V10LGtaTta11Y.10.012821
ORF1ab/nsp15A1-B10V10LGtaTta11Z.10.00289