CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = T48del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B48T48delT6500deldelACA---3131119762-19764

Details of the mutation T48del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B48T48delACA---3131All0.000006
ORF1ab/nsp15A1-B48T48delACA---55B.1.1.70.000004
ORF1ab/nsp15A1-B48T48delACA---33B.10.000027
ORF1ab/nsp15A1-B48T48delACA---33B.1.10.000054
ORF1ab/nsp15A1-B48T48delACA---220.111111
ORF1ab/nsp15A1-B48T48delACA---22AY.440.000012
ORF1ab/nsp15A1-B48T48delACA---22B.1.1.3150.016949
ORF1ab/nsp15A1-B48T48delACA---22P.1.150.000465
ORF1ab/nsp15A1-B48T48delACA---11A0.000387
ORF1ab/nsp15A1-B48T48delACA---11AY.1180.000063
ORF1ab/nsp15A1-B48T48delACA---11AY.430.000004
ORF1ab/nsp15A1-B48T48delACA---11AY.5.30.000337
ORF1ab/nsp15A1-B48T48delACA---11B.1.1.700.000341
ORF1ab/nsp15A1-B48T48delACA---11B.1.1600.000031
ORF1ab/nsp15A1-B48T48delACA---11B.1.177.730.000566
ORF1ab/nsp15A1-B48T48delACA---11B.1.177.830.001481
ORF1ab/nsp15A1-B48T48delACA---11B.1.20.000009
ORF1ab/nsp15A1-B48T48delACA---11B.1.2580.000067
ORF1ab/nsp15A1-B48T48delACA---11B.1.5820.000491
ORF1ab/nsp15A1-B48T48delACA---11P.10.000016