CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = T33del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B33T33delT6485deldelACA---3939119717-19719

Details of the mutation T33del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B33T33delACA---3939All0.000007
ORF1ab/nsp15A1-B33T33delACA---1010B.1.1.70.000009
ORF1ab/nsp15A1-B33T33delACA---33B.1.10.000054
ORF1ab/nsp15A1-B33T33delACA---220.111111
ORF1ab/nsp15A1-B33T33delACA---22B.10.000018
ORF1ab/nsp15A1-B33T33delACA---22B.1.1.3150.016949
ORF1ab/nsp15A1-B33T33delACA---22B.1.20.000018
ORF1ab/nsp15A1-B33T33delACA---22P.1.150.000465
ORF1ab/nsp15A1-B33T33delACA---11A0.000387
ORF1ab/nsp15A1-B33T33delACA---11AY.1160.000287
ORF1ab/nsp15A1-B33T33delACA---11AY.1180.000063
ORF1ab/nsp15A1-B33T33delACA---11AY.1200.000037
ORF1ab/nsp15A1-B33T33delACA---11AY.4.50.000107
ORF1ab/nsp15A1-B33T33delACA---11AY.430.000004
ORF1ab/nsp15A1-B33T33delACA---11AY.440.000006
ORF1ab/nsp15A1-B33T33delACA---11AY.620.000436
ORF1ab/nsp15A1-B33T33delACA---11B.1.1.3010.001179
ORF1ab/nsp15A1-B33T33delACA---11B.1.1.700.000341
ORF1ab/nsp15A1-B33T33delACA---11B.1.1600.000031
ORF1ab/nsp15A1-B33T33delACA---11B.1.177.730.000566
ORF1ab/nsp15A1-B33T33delACA---11B.1.177.830.001481
ORF1ab/nsp15A1-B33T33delACA---11B.1.2580.000067
ORF1ab/nsp15A1-B33T33delACA---11B.1.617.20.000004
ORF1ab/nsp15A1-B33T33delACA---11P.10.000016