CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = T33T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B33T33TT6485TsynacAacG3292620.79635319717-19719
ORF1ab/nsp15A1-B33T33TT6485TsynacAacT329580.17629219717-19719
ORF1ab/nsp15A1-B33T33TT6485TsynacAacC32990.027355619717-19719

Details of the mutation T33T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B33T33TacAacG262329All0.00005
ORF1ab/nsp15A1-B33T33TacAacT58329All0.000011
ORF1ab/nsp15A1-B33T33TacAacC9329All0.000002
ORF1ab/nsp15A1-B33T33TacAacG107107B.1.4270.005403
ORF1ab/nsp15A1-B33T33TacAacG6578AY.39.10.002575
ORF1ab/nsp15A1-B33T33TacAacT1378AY.39.10.000515
ORF1ab/nsp15A1-B33T33TacAacT2222A.50.042308
ORF1ab/nsp15A1-B33T33TacAacG1415B.1.1.70.000013
ORF1ab/nsp15A1-B33T33TacAacT115B.1.1.70.000001
ORF1ab/nsp15A1-B33T33TacAacG1115B.1.617.20.000041
ORF1ab/nsp15A1-B33T33TacAacT415B.1.617.20.000015
ORF1ab/nsp15A1-B33T33TacAacG812AY.250.000048
ORF1ab/nsp15A1-B33T33TacAacC412AY.250.000024
ORF1ab/nsp15A1-B33T33TacAacT69AY.40.000009
ORF1ab/nsp15A1-B33T33TacAacC29AY.40.000003
ORF1ab/nsp15A1-B33T33TacAacG19AY.40.000002
ORF1ab/nsp15A1-B33T33TacAacG88AY.610.000838
ORF1ab/nsp15A1-B33T33TacAacG77B.1.20.000062
ORF1ab/nsp15A1-B33T33TacAacG45AY.30.00004
ORF1ab/nsp15A1-B33T33TacAacC15AY.30.00001
ORF1ab/nsp15A1-B33T33TacAacT25AY.430.000009
ORF1ab/nsp15A1-B33T33TacAacG25AY.430.000009
ORF1ab/nsp15A1-B33T33TacAacC15AY.430.000004
ORF1ab/nsp15A1-B33T33TacAacG44AY.390.000099
ORF1ab/nsp15A1-B33T33TacAacG44B.1.10.000073
ORF1ab/nsp15A1-B33T33TacAacT44B.1.1.2220.000816
ORF1ab/nsp15A1-B33T33TacAacG33B.1.1.2510.02381
ORF1ab/nsp15A1-B33T33TacAacG33B.1.1.500.002037
ORF1ab/nsp15A1-B33T33TacAacG33B.1.1770.00004
ORF1ab/nsp15A1-B33T33TacAacG22AY.75.10.000361
ORF1ab/nsp15A1-B33T33TacAacG22B.1.4290.000047
ORF1ab/nsp15A1-B33T33TacAacT22P.10.000032
ORF1ab/nsp15A1-B33T33TacAacC110.055556
ORF1ab/nsp15A1-B33T33TacAacG11AY.1030.000006
ORF1ab/nsp15A1-B33T33TacAacG11AY.1160.000287
ORF1ab/nsp15A1-B33T33TacAacT11AY.1190.000035
ORF1ab/nsp15A1-B33T33TacAacT11AY.230.00007
ORF1ab/nsp15A1-B33T33TacAacG11AY.260.000028
ORF1ab/nsp15A1-B33T33TacAacG11AY.270.000065
ORF1ab/nsp15A1-B33T33TacAacG11AY.470.000031
ORF1ab/nsp15A1-B33T33TacAacG11AY.590.00053
ORF1ab/nsp15A1-B33T33TacAacG11AY.690.000187
ORF1ab/nsp15A1-B33T33TacAacG11B0.000128
ORF1ab/nsp15A1-B33T33TacAacG11B.1.160.300.002976
ORF1ab/nsp15A1-B33T33TacAacG11B.1.177.350.000691
ORF1ab/nsp15A1-B33T33TacAacG11B.1.177.600.000218
ORF1ab/nsp15A1-B33T33TacAacT11B.1.360.000146
ORF1ab/nsp15A1-B33T33TacAacT11B.1.3960.000706
ORF1ab/nsp15A1-B33T33TacAacG11B.1.5250.000113
ORF1ab/nsp15A1-B33T33TacAacG11B.1.617.10.000129
ORF1ab/nsp15A1-B33T33TacAacG11P.1.140.000048