CoV-GLUE | Mutations | Mutation
CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = S308S
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
| ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
| ORF1ab/nsp15A1-B | 308 | S308S | S6760S | syn | tcC | tcT | 4265 | 4108 | 0.963189 | 20542-20544 |
| ORF1ab/nsp15A1-B | 308 | S308S | S6760S | syn | tcC | tcA | 4265 | 156 | 0.0365768 | 20542-20544 |
| ORF1ab/nsp15A1-B | 308 | S308S | S6760S | syn | tcC | tcG | 4265 | 1 | 0.000234467 | 20542-20544 |
Details of the mutation S308S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
| ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4108 | 4265 | All | 0.000786 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 156 | 4265 | All | 0.00003 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcG | 1 | 4265 | All | 0 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1755 | 1774 | B.1.1.7 | 0.001571 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 19 | 1774 | B.1.1.7 | 0.000017 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 315 | 327 | AY.4 | 0.00049 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 12 | 327 | AY.4 | 0.000019 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 296 | 303 | AY.3 | 0.002944 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 7 | 303 | AY.3 | 0.00007 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 142 | 142 | B.1.177.12 | 0.021541 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 130 | 137 | B.1.617.2 | 0.00049 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 7 | 137 | B.1.617.2 | 0.000026 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 129 | 129 | AY.79 | 0.156174 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 109 | 118 | AY.44 | 0.000663 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 9 | 118 | AY.44 | 0.000055 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 69 | 75 | AY.103 | 0.000428 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 6 | 75 | AY.103 | 0.000037 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 45 | 68 | B.1.2 | 0.000396 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 23 | 68 | B.1.2 | 0.000203 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 63 | 67 | B.1.1 | 0.001143 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 4 | 67 | B.1.1 | 0.000073 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 65 | 66 | B.1 | 0.000595 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 66 | B.1 | 0.000009 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 57 | 65 | AY.25 | 0.000343 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 8 | 65 | AY.25 | 0.000048 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 50 | 51 | P.1 | 0.000788 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 51 | P.1 | 0.000016 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 45 | 45 | AA.8 | 1 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 34 | 36 | AY.43 | 0.000151 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcG | 1 | 36 | AY.43 | 0.000004 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 36 | AY.43 | 0.000004 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 35 | 36 | B.1.160 | 0.001092 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 36 | B.1.160 | 0.000031 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 34 | 34 | B.1.1.346 | 1 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 24 | 28 | AY.61 | 0.002515 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 4 | 28 | AY.61 | 0.000419 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 26 | 26 | B.1.595 | 0.006785 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 24 | 24 | B.1.177 | 0.000316 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 22 | 23 | AY.36 | 0.003261 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 23 | AY.36 | 0.000148 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 22 | 22 | AY.4.2 | 0.000477 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 19 | 21 | AY.102 | 0.000504 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 2 | 21 | AY.102 | 0.000053 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 18 | 18 | AY.73 | 0.011976 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 18 | 18 | B.1.1.277 | 0.013657 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 17 | 17 | AY.29 | 0.000268 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 16 | 16 | P.1.10 | 0.004312 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 14 | 14 | A.23.1 | 0.009859 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 14 | 14 | B.1.234 | 0.001847 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 13 | 14 | B.1.429 | 0.000306 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 14 | B.1.429 | 0.000024 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 13 | 13 | AY.42 | 0.000523 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 12 | 12 | AY.20 | 0.000466 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 12 | 12 | AY.47 | 0.000373 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 9 | 12 | B.1.1.519 | 0.000357 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 3 | 12 | B.1.1.519 | 0.000119 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 12 | 12 | B.1.243 | 0.000835 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 9 | 12 | B.1.351 | 0.000268 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 3 | 12 | B.1.351 | 0.000089 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 12 | 12 | B.1.526 | 0.000282 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 12 | 12 | D.2 | 0.0009 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 11 | 11 | AY.119 | 0.000388 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 10 | 11 | AY.39 | 0.000247 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 11 | AY.39 | 0.000025 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 11 | 11 | B.1.258.14 | 0.010784 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 11 | 11 | B.1.427 | 0.000555 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 10 | 10 | P.1.1 | 0.003177 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 7 | 9 | AY.6 | 0.000288 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 2 | 9 | AY.6 | 0.000082 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 9 | 9 | B.1.1.186 | 0.030928 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 9 | 9 | B.1.1.221 | 0.090909 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 6 | 9 | B.1.221 | 0.000426 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 3 | 9 | B.1.221 | 0.000213 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 9 | 9 | B.1.525 | 0.001018 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 8 | 8 | AY.26 | 0.000226 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 8 | 8 | B.1.1.306 | 0.003507 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 8 | 8 | B.1.366 | 0.039024 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 8 | 8 | B.1.621 | 0.000708 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 7 | 7 | AY.100 | 0.000322 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 7 | 7 | AY.2 | 0.002493 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 5 | 7 | B.1.596 | 0.000436 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 7 | B.1.596 | 0.000174 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 6 | 6 | AY.5 | 0.000124 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 5 | 6 | AY.75.1 | 0.000902 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 6 | AY.75.1 | 0.00018 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 6 | 6 | B.1.1.432 | 0.007595 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 6 | 6 | B.1.258 | 0.000399 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 5 | 5 | AY.27 | 0.000324 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 5 | 5 | AY.33 | 0.000334 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 5 | 5 | AY.4.5 | 0.000537 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 5 | 5 | AY.9 | 0.000338 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 5 | 5 | B.1.241 | 0.004058 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 4 | AY.113 | 0.000427 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 4 | AY.113 | 0.000142 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | AY.46.4 | 0.000658 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | AY.9.1 | 0.000335 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 4 | AY.98 | 0.000237 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 4 | AY.98 | 0.000079 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | AY.98.1 | 0.000194 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 4 | B.1.1.28 | 0.000934 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 4 | B.1.1.28 | 0.000311 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | B.1.1.318 | 0.001207 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | B.1.1.39 | 0.002039 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | B.1.111 | 0.0047 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 4 | 4 | B.1.265 | 0.005083 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 4 | R.1 | 0.00027 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 4 | R.1 | 0.00009 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AD.2 | 0.000657 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AY.106 | 0.001005 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AY.46 | 0.000312 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AY.71 | 0.001425 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AY.75 | 0.000168 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AY.84 | 0.001312 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 3 | AY.9.2 | 0.000073 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 3 | AY.9.2 | 0.000037 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | AY.92 | 0.000862 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 3 | 3 | AY.99.2 | 0.000276 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.1.216 | 0.002671 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.1.317 | 0.001235 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.177.52 | 0.005272 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.36 | 0.000438 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.400 | 0.001287 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.404 | 0.003906 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | B.1.9.4 | 0.018405 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | P.1.7 | 0.000958 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 3 | 3 | P.2 | 0.00056 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 3 | Q.8 | 0.00033 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 3 | Q.8 | 0.000165 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 2 | A.2.5 | 0.000499 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 2 | A.2.5 | 0.000499 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.111 | 0.000366 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.121 | 0.000271 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 2 | 2 | AY.13 | 0.000322 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.16 | 0.000759 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.16.1 | 0.00094 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.23 | 0.000139 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 2 | AY.3.1 | 0.000085 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 2 | AY.3.1 | 0.000085 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.34 | 0.000194 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.88 | 0.001768 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | AY.99 | 0.002099 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B | 0.000256 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.1.141 | 0.004024 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.1.526 | 0.007092 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.177.10 | 0.001756 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.177.15 | 0.001262 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.177.81 | 0.000379 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.177.86 | 0.000367 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.206 | 0.001631 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.258.11 | 0.000793 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.346 | 0.002621 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.36.18 | 0.00084 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.425 | 0.005988 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.438.1 | 0.000215 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | B.1.617.1 | 0.000258 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | P.1.14 | 0.000096 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 2 | 2 | Q.3 | 0.00029 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | A.2 | 0.000662 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | A.2.4 | 0.003367 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | A.27 | 0.001656 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AL.1 | 0.012987 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.105 | 0.000643 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.108 | 0.001103 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.116 | 0.000287 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.117 | 0.000085 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.120 | 0.000037 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.120.1 | 0.000321 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.120.2 | 0.001285 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.14 | 0.000088 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.34.1 | 0.00051 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.37 | 0.000316 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.39.1 | 0.00004 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | AY.39.1.1 | 0.000725 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.45 | 0.000122 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.48 | 0.000465 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | AY.52 | 0.000814 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.54 | 0.000095 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | AY.55 | 0.000917 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.59 | 0.00053 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.62 | 0.000436 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.65 | 0.000533 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.67 | 0.000464 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.7 | 0.000196 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.85 | 0.000427 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.86 | 0.00083 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AY.93 | 0.000273 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | AZ.1 | 0.000867 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.12 | 0.007463 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.214 | 0.000055 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.217 | 0.003636 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.222 | 0.000204 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.25 | 0.000569 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.262 | 0.015152 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.265 | 0.003155 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.266 | 0.012195 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.275 | 0.011236 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.311 | 0.000358 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.34 | 0.013158 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.348 | 0.000796 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.372 | 0.000689 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.374 | 0.002375 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.434 | 0.000349 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.49 | 0.017544 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.1.525 | 0.005464 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.177.54 | 0.000606 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.177.60 | 0.000218 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.177.7 | 0.000165 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.177.75 | 0.001041 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.177.87 | 0.000728 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.210 | 0.002132 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.258.17 | 0.000104 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.351.2 | 0.000303 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.36.36 | 0.000602 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.361 | 0.001289 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.409 | 0.000781 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.426 | 0.001009 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.438.2 | 0.019231 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.448 | 0.002625 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.459 | 0.004082 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | B.1.467 | 0.04 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.470 | 0.001404 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | B.1.471 | 0.002732 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | B.1.497 | 0.000315 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.509 | 0.000866 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.524 | 0.001406 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.564 | 0.000426 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.576 | 0.000907 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.609 | 0.000479 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | B.1.619 | 0.000871 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.620 | 0.000946 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.1.623 | 0.000536 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.40 | 0.000364 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | B.6 | 0.00091 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | C.4 | 0.01 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | M.2 | 0.083333 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | P.1.15 | 0.000232 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcA | 1 | 1 | P.1.16 | 0.000374 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | P.1.2 | 0.001156 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | P.1.5 | 0.076923 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | P.1.9 | 0.004808 |
| ORF1ab/nsp15A1-B | 308 | S308S | tcC | tcT | 1 | 1 | Q.1 | 0.000126 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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