CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = S287del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B287S287del1S6739del1deltcAtc-720.28571420479-20481
ORF1ab/nsp15A1-B287S287del1S6739del1delTca-ca720.28571420479-20481
ORF1ab/nsp15A1-B287S287del1S6739del1deltCAt-G720.28571420479-20481
ORF1ab/nsp15A1-B287S287del1S6739del1deltCat-a710.14285720479-20481

Details of the mutation S287del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B287S287del1tcAtc-27All0
ORF1ab/nsp15A1-B287S287del1Tca-ca27All0
ORF1ab/nsp15A1-B287S287del1tCAt-G27All0
ORF1ab/nsp15A1-B287S287del1tCat-a17All0
ORF1ab/nsp15A1-B287S287del1tCat-a11AY.480.000465
ORF1ab/nsp15A1-B287S287del1tCAt-G11B0.000128
ORF1ab/nsp15A1-B287S287del1tCAt-G11B.1.20.000009
ORF1ab/nsp15A1-B287S287del1tcAtc-11B.1.258.170.000104
ORF1ab/nsp15A1-B287S287del1Tca-ca11B.1.3750.00082
ORF1ab/nsp15A1-B287S287del1Tca-ca11B.1.5170.000427
ORF1ab/nsp15A1-B287S287del1tcAtc-11R.10.00009