CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = R257del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B257R257del1R6709del1delcgTcg-15130.86666720389-20391
ORF1ab/nsp15A1-B257R257del1R6709del1delCgt-gt1510.066666720389-20391
ORF1ab/nsp15A1-B257R257del1R6709del1delCgT-gN1510.066666720389-20391

Details of the mutation R257del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B257R257del1cgTcg-1315All0.000002
ORF1ab/nsp15A1-B257R257del1CgT-gN115All0
ORF1ab/nsp15A1-B257R257del1Cgt-gt115All0
ORF1ab/nsp15A1-B257R257del1cgTcg-44B.10.000037
ORF1ab/nsp15A1-B257R257del1cgTcg-23B.1.20.000018
ORF1ab/nsp15A1-B257R257del1Cgt-gt13B.1.20.000009
ORF1ab/nsp15A1-B257R257del1cgTcg-22AY.120.10.000642
ORF1ab/nsp15A1-B257R257del1cgTcg-11AY.1180.000063
ORF1ab/nsp15A1-B257R257del1cgTcg-11AY.250.000006
ORF1ab/nsp15A1-B257R257del1cgTcg-11AY.440.000006
ORF1ab/nsp15A1-B257R257del1cgTcg-11B.1.1.70.000001
ORF1ab/nsp15A1-B257R257del1CgT-gN11B.1.416.10.001563
ORF1ab/nsp15A1-B257R257del1cgTcg-11B.1.5960.000087