CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = R257R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B257R257RR6709RsyncgTcgG177515680.8833820389-20391
ORF1ab/nsp15A1-B257R257RR6709RsyncgTcgC17752000.11267620389-20391
ORF1ab/nsp15A1-B257R257RR6709RsyncgTcgA177550.002816920389-20391
ORF1ab/nsp15A1-B257R257RR6709RsynCgTAgG177520.0011267620389-20391

Details of the mutation R257R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B257R257RcgTcgG15681775All0.0003
ORF1ab/nsp15A1-B257R257RcgTcgC2001775All0.000038
ORF1ab/nsp15A1-B257R257RcgTcgA51775All0.000001
ORF1ab/nsp15A1-B257R257RCgTAgG21775All0
ORF1ab/nsp15A1-B257R257RcgTcgG14201424AY.590.752119
ORF1ab/nsp15A1-B257R257RcgTcgC41424AY.590.002119
ORF1ab/nsp15A1-B257R257RcgTcgC75106B.1.1.70.000067
ORF1ab/nsp15A1-B257R257RcgTcgG30106B.1.1.70.000027
ORF1ab/nsp15A1-B257R257RcgTcgA1106B.1.1.70.000001
ORF1ab/nsp15A1-B257R257RcgTcgC3439AY.40.000053
ORF1ab/nsp15A1-B257R257RcgTcgG539AY.40.000008
ORF1ab/nsp15A1-B257R257RcgTcgG2021B.1.4290.000471
ORF1ab/nsp15A1-B257R257RcgTcgC121B.1.4290.000024
ORF1ab/nsp15A1-B257R257RcgTcgG914AY.330.000601
ORF1ab/nsp15A1-B257R257RcgTcgC514AY.330.000334
ORF1ab/nsp15A1-B257R257RcgTcgG913B.10.000082
ORF1ab/nsp15A1-B257R257RcgTcgC313B.10.000027
ORF1ab/nsp15A1-B257R257RCgTAgG113B.10.000009
ORF1ab/nsp15A1-B257R257RcgTcgC812B.1.10.000145
ORF1ab/nsp15A1-B257R257RcgTcgG412B.1.10.000073
ORF1ab/nsp15A1-B257R257RcgTcgC1212B.1.1990.049587
ORF1ab/nsp15A1-B257R257RcgTcgC1011AY.230.000697
ORF1ab/nsp15A1-B257R257RcgTcgG111AY.230.00007
ORF1ab/nsp15A1-B257R257RcgTcgG811AY.430.000035
ORF1ab/nsp15A1-B257R257RcgTcgC311AY.430.000013
ORF1ab/nsp15A1-B257R257RcgTcgC1111AY.90.000744
ORF1ab/nsp15A1-B257R257RcgTcgC99B.1.3510.000268
ORF1ab/nsp15A1-B257R257RcgTcgG88B.1.1.330.003367
ORF1ab/nsp15A1-B257R257RcgTcgC55AY.46.20.003177
ORF1ab/nsp15A1-B257R257RcgTcgG55B.1.20.000044
ORF1ab/nsp15A1-B257R257RcgTcgC35P.10.000047
ORF1ab/nsp15A1-B257R257RcgTcgG25P.10.000032
ORF1ab/nsp15A1-B257R257RcgTcgG44AY.690.000747
ORF1ab/nsp15A1-B257R257RcgTcgG44B.1.1.4300.166667
ORF1ab/nsp15A1-B257R257RcgTcgG33AY.250.000018
ORF1ab/nsp15A1-B257R257RcgTcgG33B.1.1.1890.004539
ORF1ab/nsp15A1-B257R257RcgTcgG33B.1.617.20.000011
ORF1ab/nsp15A1-B257R257RcgTcgC23C.370.000232
ORF1ab/nsp15A1-B257R257RcgTcgG13C.370.000116
ORF1ab/nsp15A1-B257R257RCgTAgG120.055556
ORF1ab/nsp15A1-B257R257RcgTcgG120.055556
ORF1ab/nsp15A1-B257R257RcgTcgC12AY.1030.000006
ORF1ab/nsp15A1-B257R257RcgTcgG12AY.1030.000006
ORF1ab/nsp15A1-B257R257RcgTcgG22AY.200.000078
ORF1ab/nsp15A1-B257R257RcgTcgG22AY.390.000049
ORF1ab/nsp15A1-B257R257RcgTcgC22AY.440.000012
ORF1ab/nsp15A1-B257R257RcgTcgC22B.1.1.2140.000111
ORF1ab/nsp15A1-B257R257RcgTcgG22B.1.2430.000139
ORF1ab/nsp15A1-B257R257RcgTcgG12B.1.3690.000285
ORF1ab/nsp15A1-B257R257RcgTcgA12B.1.3690.000285
ORF1ab/nsp15A1-B257R257RcgTcgG22B.1.5960.000174
ORF1ab/nsp15A1-B257R257RcgTcgG11AU.20.002421
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.100.00053
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.1190.000035
ORF1ab/nsp15A1-B257R257RcgTcgC11AY.240.000431
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.30.00001
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.420.00004
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.740.000116
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.75.10.00018
ORF1ab/nsp15A1-B257R257RcgTcgG11AY.99.20.000092
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.1.280.000311
ORF1ab/nsp15A1-B257R257RcgTcgA11B.1.1.2820.011628
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.1.3180.000302
ORF1ab/nsp15A1-B257R257RcgTcgA11B.1.1.390.00051
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.1.4200.001006
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.1100.004525
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.1570.002985
ORF1ab/nsp15A1-B257R257RcgTcgA11B.1.160.160.000929
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.1770.000013
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.177.100.000878
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.177.770.000726
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.2650.001271
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.360.000146
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.36.170.000494
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.4270.00005
ORF1ab/nsp15A1-B257R257RcgTcgC11B.1.4700.001404
ORF1ab/nsp15A1-B257R257RcgTcgG11B.1.5250.000113
ORF1ab/nsp15A1-B257R257RcgTcgG11D.20.000075
ORF1ab/nsp15A1-B257R257RcgTcgC11M.30.076923
ORF1ab/nsp15A1-B257R257RcgTcgG11P.1.10.000318
ORF1ab/nsp15A1-B257R257RcgTcgG11P.1.140.000048
ORF1ab/nsp15A1-B257R257RcgTcgC11Q.70.001111