CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = R257L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B257R257LR6709LnonsyncGtcTt3793780.99736120389-20391
ORF1ab/nsp15A1-B257R257LR6709LnonsyncGTcTA37910.0026385220389-20391

Details of the mutation R257L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B257R257LcGtcTt378379All0.000072
ORF1ab/nsp15A1-B257R257LcGTcTA1379All0
ORF1ab/nsp15A1-B257R257LcGtcTt7070AY.40.000109
ORF1ab/nsp15A1-B257R257LcGtcTt4747B.1.617.20.000177
ORF1ab/nsp15A1-B257R257LcGtcTt2323AY.1030.000143
ORF1ab/nsp15A1-B257R257LcGtcTt2020AY.440.000122
ORF1ab/nsp15A1-B257R257LcGtcTt1616AY.430.000071
ORF1ab/nsp15A1-B257R257LcGtcTt1414AY.260.000396
ORF1ab/nsp15A1-B257R257LcGtcTt1212AY.250.000072
ORF1ab/nsp15A1-B257R257LcGtcTt1212B.1.1.70.000011
ORF1ab/nsp15A1-B257R257LcGtcTt1010AY.30.000099
ORF1ab/nsp15A1-B257R257LcGtcTt99B.1.2430.000626
ORF1ab/nsp15A1-B257R257LcGtcTt88AY.420.000322
ORF1ab/nsp15A1-B257R257LcGtcTt88B.1.4290.000188
ORF1ab/nsp15A1-B257R257LcGtcTt77AY.1020.000186
ORF1ab/nsp15A1-B257R257LcGtcTt77AY.360.001037
ORF1ab/nsp15A1-B257R257LcGtcTt66AY.98.10.000291
ORF1ab/nsp15A1-B257R257LcGtcTt66B.1.20.000053
ORF1ab/nsp15A1-B257R257LcGtcTt66B.1.4360.006173
ORF1ab/nsp15A1-B257R257LcGtcTt55AY.4.50.000537
ORF1ab/nsp15A1-B257R257LcGtcTt55B.10.000046
ORF1ab/nsp15A1-B257R257LcGtcTt44AY.1190.000141
ORF1ab/nsp15A1-B257R257LcGtcTt44AY.190.004561
ORF1ab/nsp15A1-B257R257LcGtcTt44B.1.10.000073
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.230.000209
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.290.000047
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.330.0002
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.390.000074
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.470.000093
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.50.000062
ORF1ab/nsp15A1-B257R257LcGtcTt33AY.90.000203
ORF1ab/nsp15A1-B257R257LcGtcTt33B.1.1110.003525
ORF1ab/nsp15A1-B257R257LcGtcTt22A.10.000564
ORF1ab/nsp15A1-B257R257LcGtcTt22AY.1160.000574
ORF1ab/nsp15A1-B257R257LcGtcTt22AY.1200.000074
ORF1ab/nsp15A1-B257R257LcGtcTt22AY.950.001522
ORF1ab/nsp15A1-B257R257LcGtcTt22AY.99.20.000184
ORF1ab/nsp15A1-B257R257LcGtcTt22B.1.1.3040.005618
ORF1ab/nsp15A1-B257R257LcGtcTt22B.1.1770.000026
ORF1ab/nsp15A1-B257R257LcGtcTt22B.1.36.170.000988
ORF1ab/nsp15A1-B257R257LcGtcTt11A.190.009434
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.1000.000046
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.1170.000085
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.1180.000063
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.1210.000135
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.130.000161
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.170.008197
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.270.000065
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.3.10.000085
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.340.000097
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.380.000499
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.39.10.00004
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.39.1.10.000725
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.4.20.000022
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.460.000104
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.46.40.000165
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.46.60.000072
ORF1ab/nsp15A1-B257R257LcGTcTA11AY.590.00053
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.80.000606
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.800.001129
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.840.000437
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.870.000833
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.9.20.000037
ORF1ab/nsp15A1-B257R257LcGtcTt11AY.980.000079
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.100.001115
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.1860.003436
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.2160.00089
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.3390.010526
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.390.00051
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.510.001718
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1.5190.00004
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.1600.000031
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.2060.000816
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.2210.000071
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.2340.000132
ORF1ab/nsp15A1-B257R257LcGtcTt11B.1.5950.000261