CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = Q19H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B19Q19HQ6471HnonsyncaGcaT823981780.99259619675-19677
ORF1ab/nsp15A1-B19Q19HQ6471HnonsyncaGcaC8239610.0074038119675-19677

Details of the mutation Q19H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B19Q19HcaGcaT81788239All0.001564
ORF1ab/nsp15A1-B19Q19HcaGcaC618239All0.000012
ORF1ab/nsp15A1-B19Q19HcaGcaT42334233AY.1140.978276
ORF1ab/nsp15A1-B19Q19HcaGcaT13711374B.1.1.70.001227
ORF1ab/nsp15A1-B19Q19HcaGcaC31374B.1.1.70.000003
ORF1ab/nsp15A1-B19Q19HcaGcaT819819B.1.1390.60044
ORF1ab/nsp15A1-B19Q19HcaGcaT281281AY.40.000437
ORF1ab/nsp15A1-B19Q19HcaGcaT233233AY.250.001401
ORF1ab/nsp15A1-B19Q19HcaGcaT208208AY.470.00647
ORF1ab/nsp15A1-B19Q19HcaGcaT177180B.1.617.20.000666
ORF1ab/nsp15A1-B19Q19HcaGcaC3180B.1.617.20.000011
ORF1ab/nsp15A1-B19Q19HcaGcaT8585B.1.10.001542
ORF1ab/nsp15A1-B19Q19HcaGcaT7374B.10.000669
ORF1ab/nsp15A1-B19Q19HcaGcaC174B.10.000009
ORF1ab/nsp15A1-B19Q19HcaGcaT5353B.1.20.000467
ORF1ab/nsp15A1-B19Q19HcaGcaT4343AY.440.000262
ORF1ab/nsp15A1-B19Q19HcaGcaC4042B.1.5260.00094
ORF1ab/nsp15A1-B19Q19HcaGcaT242B.1.5260.000047
ORF1ab/nsp15A1-B19Q19HcaGcaT3738AY.1030.00023
ORF1ab/nsp15A1-B19Q19HcaGcaC138AY.1030.000006
ORF1ab/nsp15A1-B19Q19HcaGcaT3536P.10.000551
ORF1ab/nsp15A1-B19Q19HcaGcaC136P.10.000016
ORF1ab/nsp15A1-B19Q19HcaGcaT3434B.1.5090.029437
ORF1ab/nsp15A1-B19Q19HcaGcaT3030AY.650.015991
ORF1ab/nsp15A1-B19Q19HcaGcaT2729B.1.1770.000356
ORF1ab/nsp15A1-B19Q19HcaGcaC229B.1.1770.000026
ORF1ab/nsp15A1-B19Q19HcaGcaT2828AY.1180.001754
ORF1ab/nsp15A1-B19Q19HcaGcaT2125AY.430.000093
ORF1ab/nsp15A1-B19Q19HcaGcaC425AY.430.000018
ORF1ab/nsp15A1-B19Q19HcaGcaT2222AY.30.000219
ORF1ab/nsp15A1-B19Q19HcaGcaT2121AY.50.000434
ORF1ab/nsp15A1-B19Q19HcaGcaT1919A.2.50.009481
ORF1ab/nsp15A1-B19Q19HcaGcaT1919B.1.3510.000565
ORF1ab/nsp15A1-B19Q19HcaGcaT1717AY.46.60.001228
ORF1ab/nsp15A1-B19Q19HcaGcaT1313AY.46.20.008259
ORF1ab/nsp15A1-B19Q19HcaGcaT1212B.1.2210.000852
ORF1ab/nsp15A1-B19Q19HcaGcaT1111B.1.4690.039711
ORF1ab/nsp15A1-B19Q19HcaGcaT1010B.1.2430.000696
ORF1ab/nsp15A1-B19Q19HcaGcaT88AY.260.000226
ORF1ab/nsp15A1-B19Q19HcaGcaT88AY.420.000322
ORF1ab/nsp15A1-B19Q19HcaGcaT88B.1.1600.00025
ORF1ab/nsp15A1-B19Q19HcaGcaT77AY.5.30.002362
ORF1ab/nsp15A1-B19Q19HcaGcaT66AY.1190.000212
ORF1ab/nsp15A1-B19Q19HcaGcaT66AY.200.000233
ORF1ab/nsp15A1-B19Q19HcaGcaT66AY.290.000095
ORF1ab/nsp15A1-B19Q19HcaGcaT66AY.540.000572
ORF1ab/nsp15A1-B19Q19HcaGcaT46AY.98.10.000194
ORF1ab/nsp15A1-B19Q19HcaGcaC26AY.98.10.000097
ORF1ab/nsp15A1-B19Q19HcaGcaT66B.1.438.20.115385
ORF1ab/nsp15A1-B19Q19HcaGcaT55AY.920.001436
ORF1ab/nsp15A1-B19Q19HcaGcaT55B.1.177.810.000947
ORF1ab/nsp15A1-B19Q19HcaGcaT44AY.230.000279
ORF1ab/nsp15A1-B19Q19HcaGcaT44AY.460.000416
ORF1ab/nsp15A1-B19Q19HcaGcaT44AY.75.10.000721
ORF1ab/nsp15A1-B19Q19HcaGcaT44AY.90.00027
ORF1ab/nsp15A1-B19Q19HcaGcaT44B.1.2580.000266
ORF1ab/nsp15A1-B19Q19HcaGcaT44C.370.000464
ORF1ab/nsp15A1-B19Q19HcaGcaT34P.20.00056
ORF1ab/nsp15A1-B19Q19HcaGcaC14P.20.000187
ORF1ab/nsp15A1-B19Q19HcaGcaT33AY.1170.000254
ORF1ab/nsp15A1-B19Q19HcaGcaT33AY.4.20.000065
ORF1ab/nsp15A1-B19Q19HcaGcaT33AY.60.000123
ORF1ab/nsp15A1-B19Q19HcaGcaT33AY.740.000347
ORF1ab/nsp15A1-B19Q19HcaGcaT33AY.750.000168
ORF1ab/nsp15A1-B19Q19HcaGcaT33AY.99.20.000276
ORF1ab/nsp15A1-B19Q19HcaGcaT33B.1.1.2220.000612
ORF1ab/nsp15A1-B19Q19HcaGcaT33B.1.1.2840.000322
ORF1ab/nsp15A1-B19Q19HcaGcaT33B.1.221.40.0125
ORF1ab/nsp15A1-B19Q19HcaGcaT33B.1.2340.000396
ORF1ab/nsp15A1-B19Q19HcaGcaT33B.1.5960.000261
ORF1ab/nsp15A1-B19Q19HcaGcaT33B.400.001093
ORF1ab/nsp15A1-B19Q19HcaGcaT33P.1.140.000143
ORF1ab/nsp15A1-B19Q19HcaGcaT33P.30.004785
ORF1ab/nsp15A1-B19Q19HcaGcaT33Q.10.000379
ORF1ab/nsp15A1-B19Q19HcaGcaT33Q.30.000435
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.1080.002205
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.1100.000225
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.1130.000285
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.120.000632
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.1200.000074
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.330.000134
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.340.000194
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.360.000296
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.390.000049
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.450.000243
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.610.00021
ORF1ab/nsp15A1-B19Q19HcaGcaT22AY.670.000929
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.1.2140.000111
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.1.5190.000079
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.1.5280.009615
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.177.70.00033
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.36.80.002
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.4270.000101
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.4290.000047
ORF1ab/nsp15A1-B19Q19HcaGcaT22B.1.5240.002813
ORF1ab/nsp15A1-B19Q19HcaGcaT22C.300.003454
ORF1ab/nsp15A1-B19Q19HcaGcaT22Q.80.00033
ORF1ab/nsp15A1-B19Q19HcaGcaT11A0.000387
ORF1ab/nsp15A1-B19Q19HcaGcaT11A.230.010526
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.370.000316
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.380.000499
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.39.10.00004
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.4.30.000842
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.4.50.000107
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.400.000964
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.46.50.000198
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.580.000907
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.680.000274
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.700.000209
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.710.000475
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.840.000437
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.850.000427
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.9.10.000084
ORF1ab/nsp15A1-B19Q19HcaGcaT11AY.9.20.000037
ORF1ab/nsp15A1-B19Q19HcaGcaT11B0.000128
ORF1ab/nsp15A1-B19Q19HcaGcaC11B.1.1.10.000327
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.2070.001182
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.2160.00089
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.250.000569
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.2620.015152
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.3060.000438
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.3120.001912
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1.370.000193
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.1040.00369
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.160.80.001289
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.177.500.004695
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.177.600.000218
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.177.650.000665
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.177.820.000477
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.177.870.000728
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.2100.002132
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.2400.000216
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.258.140.00098
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.258.170.000104
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.3490.000715
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.3960.000706
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.5470.02439
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.5650.00081
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.5800.004065
ORF1ab/nsp15A1-B19Q19HcaGcaT11B.1.617.10.000129
ORF1ab/nsp15A1-B19Q19HcaGcaC11B.1.910.002075
ORF1ab/nsp15A1-B19Q19HcaGcaT11C.350.000774
ORF1ab/nsp15A1-B19Q19HcaGcaT11C.360.000911
ORF1ab/nsp15A1-B19Q19HcaGcaT11D.20.000075
ORF1ab/nsp15A1-B19Q19HcaGcaT11P.1.100.000269
ORF1ab/nsp15A1-B19Q19HcaGcaT11P.1.170.000162
ORF1ab/nsp15A1-B19Q19HcaGcaT11P.1.70.000319
ORF1ab/nsp15A1-B19Q19HcaGcaC11P.70.004367
ORF1ab/nsp15A1-B19Q19HcaGcaT11Q.70.001111
ORF1ab/nsp15A1-B19Q19HcaGcaT11R.10.00009