CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = Q196H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B196Q196HQ6648HnonsyncaGcaT118011730.99406820206-20208
ORF1ab/nsp15A1-B196Q196HQ6648HnonsyncaGcaC118070.005932220206-20208

Details of the mutation Q196H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B196Q196HcaGcaT11731180All0.000224
ORF1ab/nsp15A1-B196Q196HcaGcaC71180All0.000001
ORF1ab/nsp15A1-B196Q196HcaGcaT336336B.1.1.70.000301
ORF1ab/nsp15A1-B196Q196HcaGcaT105105AY.330.007012
ORF1ab/nsp15A1-B196Q196HcaGcaT8485AY.40.000131
ORF1ab/nsp15A1-B196Q196HcaGcaC185AY.40.000002
ORF1ab/nsp15A1-B196Q196HcaGcaT7878B.1.1.4610.939759
ORF1ab/nsp15A1-B196Q196HcaGcaT5050B.1.20.00044
ORF1ab/nsp15A1-B196Q196HcaGcaT3638B.1.617.20.000136
ORF1ab/nsp15A1-B196Q196HcaGcaC238B.1.617.20.000008
ORF1ab/nsp15A1-B196Q196HcaGcaT3737AY.440.000225
ORF1ab/nsp15A1-B196Q196HcaGcaT3737B.1.1600.001154
ORF1ab/nsp15A1-B196Q196HcaGcaT3232B.1.1.5190.001271
ORF1ab/nsp15A1-B196Q196HcaGcaT3030R.10.0027
ORF1ab/nsp15A1-B196Q196HcaGcaT2626AY.1030.000161
ORF1ab/nsp15A1-B196Q196HcaGcaT2323AY.420.000925
ORF1ab/nsp15A1-B196Q196HcaGcaT2323B.1.1.2220.004692
ORF1ab/nsp15A1-B196Q196HcaGcaT2121B.1.6210.001859
ORF1ab/nsp15A1-B196Q196HcaGcaT1515B.10.000137
ORF1ab/nsp15A1-B196Q196HcaGcaT1414AY.950.010654
ORF1ab/nsp15A1-B196Q196HcaGcaT1213B.1.10.000218
ORF1ab/nsp15A1-B196Q196HcaGcaC113B.1.10.000018
ORF1ab/nsp15A1-B196Q196HcaGcaT1212AY.430.000053
ORF1ab/nsp15A1-B196Q196HcaGcaT1212Q.80.001979
ORF1ab/nsp15A1-B196Q196HcaGcaT1010A.23.10.007042
ORF1ab/nsp15A1-B196Q196HcaGcaT66AY.250.000036
ORF1ab/nsp15A1-B196Q196HcaGcaT66AY.260.00017
ORF1ab/nsp15A1-B196Q196HcaGcaT66B.1.4800.014925
ORF1ab/nsp15A1-B196Q196HcaGcaT66P.10.000095
ORF1ab/nsp15A1-B196Q196HcaGcaT55AY.1200.000186
ORF1ab/nsp15A1-B196Q196HcaGcaT55AY.390.000124
ORF1ab/nsp15A1-B196Q196HcaGcaT55AY.610.000524
ORF1ab/nsp15A1-B196Q196HcaGcaT44AY.1000.000184
ORF1ab/nsp15A1-B196Q196HcaGcaT44AY.450.000487
ORF1ab/nsp15A1-B196Q196HcaGcaT44AY.720.005442
ORF1ab/nsp15A1-B196Q196HcaGcaT44B.1.1.3890.024242
ORF1ab/nsp15A1-B196Q196HcaGcaT23AY.290.000032
ORF1ab/nsp15A1-B196Q196HcaGcaC13AY.290.000016
ORF1ab/nsp15A1-B196Q196HcaGcaT33AY.30.00003
ORF1ab/nsp15A1-B196Q196HcaGcaT33AY.50.000062
ORF1ab/nsp15A1-B196Q196HcaGcaT33AY.60.000123
ORF1ab/nsp15A1-B196Q196HcaGcaT33AY.98.10.000145
ORF1ab/nsp15A1-B196Q196HcaGcaT33AY.99.20.000276
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.177.150.001893
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.1920.027778
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.360.000438
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.36.100.014354
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.36.290.001552
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.3690.000856
ORF1ab/nsp15A1-B196Q196HcaGcaT33B.1.5960.000261
ORF1ab/nsp15A1-B196Q196HcaGcaT23D.20.00015
ORF1ab/nsp15A1-B196Q196HcaGcaC13D.20.000075
ORF1ab/nsp15A1-B196Q196HcaGcaT33P.1.170.000485
ORF1ab/nsp15A1-B196Q196HcaGcaT33P.20.00056
ORF1ab/nsp15A1-B196Q196HcaGcaT22AY.1020.000053
ORF1ab/nsp15A1-B196Q196HcaGcaT22AY.1100.000225
ORF1ab/nsp15A1-B196Q196HcaGcaT22AY.4.20.000043
ORF1ab/nsp15A1-B196Q196HcaGcaT22AY.470.000062
ORF1ab/nsp15A1-B196Q196HcaGcaT22AY.990.002099
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.1.1580.02439
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.1.2140.000111
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.1.2940.002532
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.2580.000133
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.258.90.01
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.3510.000059
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.3960.001411
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.4040.002604
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.4270.000101
ORF1ab/nsp15A1-B196Q196HcaGcaT22B.1.6090.000959
ORF1ab/nsp15A1-B196Q196HcaGcaT22C.160.002121
ORF1ab/nsp15A1-B196Q196HcaGcaT22P.1.20.002312
ORF1ab/nsp15A1-B196Q196HcaGcaT22P.1.70.000639
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.1210.000135
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.130.000161
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.200.000039
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.230.00007
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.280.00189
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.360.000148
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.39.10.00004
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.46.40.000165
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.46.60.000072
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.550.000917
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.600.000938
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.700.000209
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.75.10.00018
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.90.000068
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.940.000443
ORF1ab/nsp15A1-B196Q196HcaGcaT11AY.980.000079
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.1610.003534
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.1760.000439
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.2000.007463
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.2840.000107
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.3260.001761
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.330.000421
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.4090.002833
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.510.001718
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.5230.001563
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1.580.005376
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.1770.000013
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.177.230.003236
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.177.690.001484
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.177.830.001481
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.22.10.03125
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.2210.000071
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.2320.000537
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.36.80.001
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.438.10.000107
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.5210.004975
ORF1ab/nsp15A1-B196Q196HcaGcaC11B.1.5640.000426
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.6050.005952
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.6200.000946
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.6270.00202
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.1.6290.013333
ORF1ab/nsp15A1-B196Q196HcaGcaT11B.60.00091
ORF1ab/nsp15A1-B196Q196HcaGcaT11C.370.000116
ORF1ab/nsp15A1-B196Q196HcaGcaT11K.20.04