CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = P270S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B270P270SP6722SnonsynCctTct130212980.99692820428-20430
ORF1ab/nsp15A1-B270P270SP6722SnonsynCcTTcG130220.001536120428-20430
ORF1ab/nsp15A1-B270P270SP6722SnonsynCcTTcC130220.001536120428-20430

Details of the mutation P270S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B270P270SCctTct12981302All0.000248
ORF1ab/nsp15A1-B270P270SCcTTcG21302All0
ORF1ab/nsp15A1-B270P270SCcTTcC21302All0
ORF1ab/nsp15A1-B270P270SCctTct229229B.1.1.70.000205
ORF1ab/nsp15A1-B270P270SCctTct156156AY.40.000243
ORF1ab/nsp15A1-B270P270SCctTct4646B.1.617.20.000173
ORF1ab/nsp15A1-B270P270SCctTct4545B.1.1.2770.034143
ORF1ab/nsp15A1-B270P270SCctTct3939B.1.177.860.007155
ORF1ab/nsp15A1-B270P270SCctTct3333B.1.20.000291
ORF1ab/nsp15A1-B270P270SCctTct3131AY.1160.00889
ORF1ab/nsp15A1-B270P270SCctTct2728AY.250.000162
ORF1ab/nsp15A1-B270P270SCcTTcC128AY.250.000006
ORF1ab/nsp15A1-B270P270SCctTct2828B.1.1.1530.030668
ORF1ab/nsp15A1-B270P270SCctTct2727AY.1030.000168
ORF1ab/nsp15A1-B270P270SCctTct2727AY.440.000164
ORF1ab/nsp15A1-B270P270SCctTct2626AY.1180.001629
ORF1ab/nsp15A1-B270P270SCctTct2525P.10.000394
ORF1ab/nsp15A1-B270P270SCctTct2323B.10.000211
ORF1ab/nsp15A1-B270P270SCctTct2323Q.30.003336
ORF1ab/nsp15A1-B270P270SCctTct2222B.1.10.000399
ORF1ab/nsp15A1-B270P270SCctTct2020B.1.1.5180.126582
ORF1ab/nsp15A1-B270P270SCctTct1919AY.30.000189
ORF1ab/nsp15A1-B270P270SCctTct1717AY.430.000075
ORF1ab/nsp15A1-B270P270SCctTct1515AY.9.10.001256
ORF1ab/nsp15A1-B270P270SCctTct1515B.1.1770.000198
ORF1ab/nsp15A1-B270P270SCctTct1515P.1.120.00726
ORF1ab/nsp15A1-B270P270SCctTct1414B.1.1600.000437
ORF1ab/nsp15A1-B270P270SCctTct1212AY.46.60.000866
ORF1ab/nsp15A1-B270P270SCctTct1212B.1.177.180.013921
ORF1ab/nsp15A1-B270P270SCctTct1212B.1.177.60.011719
ORF1ab/nsp15A1-B270P270SCctTct1111AY.740.001272
ORF1ab/nsp15A1-B270P270SCctTct1010AY.260.000283
ORF1ab/nsp15A1-B270P270SCctTct1010AY.4.40.004092
ORF1ab/nsp15A1-B270P270SCctTct1010B.1.1.3170.004117
ORF1ab/nsp15A1-B270P270SCctTct1010C.370.001161
ORF1ab/nsp15A1-B270P270SCctTct88B.1.3110.002197
ORF1ab/nsp15A1-B270P270SCctTct77B.1.1.2250.05036
ORF1ab/nsp15A1-B270P270SCctTct77B.1.5250.000792
ORF1ab/nsp15A1-B270P270SCctTct66AY.1000.000276
ORF1ab/nsp15A1-B270P270SCctTct66AY.290.000095
ORF1ab/nsp15A1-B270P270SCctTct66AY.70.001176
ORF1ab/nsp15A1-B270P270SCctTct66B.1.1.4160.00543
ORF1ab/nsp15A1-B270P270SCctTct66B.1.360.000875
ORF1ab/nsp15A1-B270P270SCctTct66B.1.5960.000523
ORF1ab/nsp15A1-B270P270SCctTct55AT.10.025641
ORF1ab/nsp15A1-B270P270SCctTct55AY.200.000194
ORF1ab/nsp15A1-B270P270SCctTct55AY.4.20.000108
ORF1ab/nsp15A1-B270P270SCctTct55B0.000639
ORF1ab/nsp15A1-B270P270SCctTct55B.1.1.5190.000199
ORF1ab/nsp15A1-B270P270SCctTct55B.1.1.5250.027322
ORF1ab/nsp15A1-B270P270SCctTct55B.1.3690.001426
ORF1ab/nsp15A1-B270P270SCcTTcG240.111111
ORF1ab/nsp15A1-B270P270SCctTct140.055556
ORF1ab/nsp15A1-B270P270SCcTTcC140.055556
ORF1ab/nsp15A1-B270P270SCctTct44AY.330.000267
ORF1ab/nsp15A1-B270P270SCctTct44AY.390.000099
ORF1ab/nsp15A1-B270P270SCctTct44AY.4.2.10.000596
ORF1ab/nsp15A1-B270P270SCctTct44AY.450.000487
ORF1ab/nsp15A1-B270P270SCctTct44AY.50.000083
ORF1ab/nsp15A1-B270P270SCctTct44AY.75.10.000721
ORF1ab/nsp15A1-B270P270SCctTct44B.1.4290.000094
ORF1ab/nsp15A1-B270P270SCctTct44B.1.6210.000354
ORF1ab/nsp15A1-B270P270SCctTct44B.400.001457
ORF1ab/nsp15A1-B270P270SCctTct44B.6.60.003556
ORF1ab/nsp15A1-B270P270SCctTct44D.20.0003
ORF1ab/nsp15A1-B270P270SCctTct33A.2.40.010101
ORF1ab/nsp15A1-B270P270SCctTct33AY.1020.00008
ORF1ab/nsp15A1-B270P270SCctTct33AY.1150.015625
ORF1ab/nsp15A1-B270P270SCctTct33AY.1190.000106
ORF1ab/nsp15A1-B270P270SCctTct33AY.300.001187
ORF1ab/nsp15A1-B270P270SCctTct33AY.360.000445
ORF1ab/nsp15A1-B270P270SCctTct33AY.420.000121
ORF1ab/nsp15A1-B270P270SCctTct33B.1.1270.006593
ORF1ab/nsp15A1-B270P270SCctTct33B.1.177.330.004934
ORF1ab/nsp15A1-B270P270SCctTct33B.1.177.590.048387
ORF1ab/nsp15A1-B270P270SCctTct33B.1.2210.000213
ORF1ab/nsp15A1-B270P270SCctTct33B.1.2340.000396
ORF1ab/nsp15A1-B270P270SCctTct33P.1.150.000697
ORF1ab/nsp15A1-B270P270SCctTct22A.2.20.003378
ORF1ab/nsp15A1-B270P270SCctTct22AY.1070.000932
ORF1ab/nsp15A1-B270P270SCctTct22AY.39.10.000079
ORF1ab/nsp15A1-B270P270SCctTct22AY.460.000208
ORF1ab/nsp15A1-B270P270SCctTct22AY.46.50.000397
ORF1ab/nsp15A1-B270P270SCctTct22AY.470.000062
ORF1ab/nsp15A1-B270P270SCctTct22AY.650.001066
ORF1ab/nsp15A1-B270P270SCctTct22AY.850.000854
ORF1ab/nsp15A1-B270P270SCctTct22B.1.1.1940.009901
ORF1ab/nsp15A1-B270P270SCctTct22B.1.1.2970.004474
ORF1ab/nsp15A1-B270P270SCctTct22B.1.160.280.005848
ORF1ab/nsp15A1-B270P270SCctTct22B.1.177.880.024691
ORF1ab/nsp15A1-B270P270SCctTct22B.1.2410.001623
ORF1ab/nsp15A1-B270P270SCctTct22B.1.3510.000059
ORF1ab/nsp15A1-B270P270SCctTct22B.1.351.20.000605
ORF1ab/nsp15A1-B270P270SCctTct22B.1.36.290.001035
ORF1ab/nsp15A1-B270P270SCctTct22B.1.3820.017857
ORF1ab/nsp15A1-B270P270SCctTct22B.1.5170.000854
ORF1ab/nsp15A1-B270P270SCctTct22B.1.6090.000959
ORF1ab/nsp15A1-B270P270SCctTct22B.1.6370.000146
ORF1ab/nsp15A1-B270P270SCctTct22P.1.140.000096
ORF1ab/nsp15A1-B270P270SCctTct22P.1.40.001953
ORF1ab/nsp15A1-B270P270SCctTct22P.20.000373
ORF1ab/nsp15A1-B270P270SCctTct11AD.20.000219
ORF1ab/nsp15A1-B270P270SCctTct11AY.1170.000085
ORF1ab/nsp15A1-B270P270SCctTct11AY.120.10.000321
ORF1ab/nsp15A1-B270P270SCctTct11AY.1210.000135
ORF1ab/nsp15A1-B270P270SCctTct11AY.130.000161
ORF1ab/nsp15A1-B270P270SCctTct11AY.140.000088
ORF1ab/nsp15A1-B270P270SCctTct11AY.150.002222
ORF1ab/nsp15A1-B270P270SCctTct11AY.270.000065
ORF1ab/nsp15A1-B270P270SCctTct11AY.320.000532
ORF1ab/nsp15A1-B270P270SCctTct11AY.340.000097
ORF1ab/nsp15A1-B270P270SCctTct11AY.4.10.000737
ORF1ab/nsp15A1-B270P270SCctTct11AY.46.40.000165
ORF1ab/nsp15A1-B270P270SCctTct11AY.480.000465
ORF1ab/nsp15A1-B270P270SCctTct11AY.590.00053
ORF1ab/nsp15A1-B270P270SCctTct11AY.60.000041
ORF1ab/nsp15A1-B270P270SCctTct11AY.660.00107
ORF1ab/nsp15A1-B270P270SCctTct11AY.670.000464
ORF1ab/nsp15A1-B270P270SCctTct11AY.680.000274
ORF1ab/nsp15A1-B270P270SCctTct11AY.690.000187
ORF1ab/nsp15A1-B270P270SCctTct11AY.7.20.000559
ORF1ab/nsp15A1-B270P270SCctTct11AY.730.000665
ORF1ab/nsp15A1-B270P270SCctTct11AY.750.000056
ORF1ab/nsp15A1-B270P270SCctTct11AY.860.00083
ORF1ab/nsp15A1-B270P270SCctTct11AY.90.000068
ORF1ab/nsp15A1-B270P270SCctTct11AY.940.000443
ORF1ab/nsp15A1-B270P270SCctTct11AY.98.10.000048
ORF1ab/nsp15A1-B270P270SCctTct11AY.99.20.000092
ORF1ab/nsp15A1-B270P270SCctTct11AZ.50.003509
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1.2140.000055
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1.2220.000204
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1.2430.004082
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1.4090.002833
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1.5210.005348
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1.700.000341
ORF1ab/nsp15A1-B270P270SCctTct11B.1.1460.004237
ORF1ab/nsp15A1-B270P270SCctTct11B.1.177.350.000691
ORF1ab/nsp15A1-B270P270SCctTct11B.1.177.70.000165
ORF1ab/nsp15A1-B270P270SCctTct11B.1.177.750.001041
ORF1ab/nsp15A1-B270P270SCctTct11B.1.177.90.001332
ORF1ab/nsp15A1-B270P270SCctTct11B.1.2130.014925
ORF1ab/nsp15A1-B270P270SCctTct11B.1.214.20.0006
ORF1ab/nsp15A1-B270P270SCctTct11B.1.2370.004975
ORF1ab/nsp15A1-B270P270SCctTct11B.1.2430.00007
ORF1ab/nsp15A1-B270P270SCctTct11B.1.2790.000514
ORF1ab/nsp15A1-B270P270SCctTct11B.1.3290.000608
ORF1ab/nsp15A1-B270P270SCctTct11B.1.3500.002933
ORF1ab/nsp15A1-B270P270SCctTct11B.1.36.100.004785
ORF1ab/nsp15A1-B270P270SCctTct11B.1.36.80.001
ORF1ab/nsp15A1-B270P270SCctTct11B.1.3670.000792
ORF1ab/nsp15A1-B270P270SCctTct11B.1.3750.00082
ORF1ab/nsp15A1-B270P270SCctTct11B.1.4000.000429
ORF1ab/nsp15A1-B270P270SCctTct11B.1.466.20.000391
ORF1ab/nsp15A1-B270P270SCctTct11B.1.4700.001404
ORF1ab/nsp15A1-B270P270SCctTct11B.1.5200.021739
ORF1ab/nsp15A1-B270P270SCctTct11B.1.5680.001111
ORF1ab/nsp15A1-B270P270SCctTct11B.1.5820.000491
ORF1ab/nsp15A1-B270P270SCctTct11B.1.595.40.007299
ORF1ab/nsp15A1-B270P270SCctTct11B.1.5990.00365
ORF1ab/nsp15A1-B270P270SCctTct11B.1.6120.002653
ORF1ab/nsp15A1-B270P270SCctTct11B.1.617.10.000129
ORF1ab/nsp15A1-B270P270SCctTct11B.1.6280.000352
ORF1ab/nsp15A1-B270P270SCctTct11K.10.02381
ORF1ab/nsp15A1-B270P270SCctTct11P.1.160.000374
ORF1ab/nsp15A1-B270P270SCctTct11Q.80.000165
ORF1ab/nsp15A1-B270P270SCctTct11R.10.00009
ORF1ab/nsp15A1-B270P270SCctTct11W.10.008696