CoV-GLUE | Mutations | Mutation
CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = P205S
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
| ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
| ORF1ab/nsp15A1-B | 205 | P205S | P6657S | nonsyn | Ccc | Tcc | 13912 | 13906 | 0.999569 | 20233-20235 |
| ORF1ab/nsp15A1-B | 205 | P205S | P6657S | nonsyn | CcC | TcT | 13912 | 5 | 0.000359402 | 20233-20235 |
| ORF1ab/nsp15A1-B | 205 | P205S | P6657S | nonsyn | CcC | TcA | 13912 | 1 | 0.0000718804 | 20233-20235 |
Details of the mutation P205S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
| ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 13906 | 13912 | All | 0.00266 |
| ORF1ab/nsp15A1-B | 205 | P205S | CcC | TcT | 5 | 13912 | All | 0.000001 |
| ORF1ab/nsp15A1-B | 205 | P205S | CcC | TcA | 1 | 13912 | All | 0 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6059 | 6063 | B.1.1.7 | 0.005424 |
| ORF1ab/nsp15A1-B | 205 | P205S | CcC | TcT | 3 | 6063 | B.1.1.7 | 0.000003 |
| ORF1ab/nsp15A1-B | 205 | P205S | CcC | TcA | 1 | 6063 | B.1.1.7 | 0.000001 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1368 | 1368 | AY.103 | 0.008494 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 744 | 744 | AY.4 | 0.001158 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 487 | 488 | B.1.617.2 | 0.001834 |
| ORF1ab/nsp15A1-B | 205 | P205S | CcC | TcT | 1 | 488 | B.1.617.2 | 0.000004 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 484 | 484 | B.1.2 | 0.004262 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 480 | 480 | B.1.1.302 | 0.995851 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 363 | 363 | AY.43 | 0.001608 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 330 | 330 | B.1.177 | 0.004345 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 183 | 183 | B.1.1.58 | 0.983871 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 146 | 146 | AY.41 | 0.042916 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 136 | 136 | B.1.351 | 0.004043 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 117 | 117 | AY.44 | 0.000712 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 115 | 115 | B.1 | 0.001053 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 113 | 113 | AY.3 | 0.001124 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 107 | 107 | B.1.523 | 0.262255 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 96 | 96 | AY.25 | 0.000577 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 93 | 93 | P.1 | 0.001465 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 84 | 84 | B.1.165 | 1 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 80 | 80 | B.1.1 | 0.001451 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 79 | 79 | AY.111 | 0.014469 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 75 | 75 | AY.5 | 0.001549 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 69 | 69 | AY.120 | 0.002565 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 67 | 67 | AY.4.2 | 0.001453 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 54 | 54 | AY.102 | 0.001432 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 53 | 53 | P.1.10.1 | 0.430894 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 50 | 50 | B.1.526 | 0.001175 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 43 | 43 | AY.9 | 0.002907 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 41 | 41 | B.1.234 | 0.00541 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 40 | 40 | B.1.621 | 0.003541 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 37 | 37 | B.1.429 | 0.000871 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 36 | 36 | AY.119 | 0.001271 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 36 | 36 | AY.74 | 0.004163 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 36 | 36 | B.1.177.81 | 0.006816 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 34 | 34 | B.1.221 | 0.002415 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 32 | 32 | B.1.595 | 0.008351 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 28 | 28 | AY.14 | 0.002464 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 28 | 28 | AY.26 | 0.000793 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 28 | 28 | B.1.160 | 0.000873 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 27 | 27 | B.1.1.228 | 0.082317 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 26 | 26 | Q.8 | 0.004288 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 25 | 25 | AY.118 | 0.001566 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 25 | 25 | AY.37 | 0.007901 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 25 | 25 | AY.39 | 0.000618 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 25 | 25 | B.1.1.434 | 0.008714 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 24 | 24 | AY.32 | 0.01278 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 24 | 24 | AY.4.5 | 0.00258 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 22 | 22 | AY.23 | 0.001534 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 22 | 22 | AY.47 | 0.000684 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 22 | 22 | B.1.1.129 | 0.201835 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 22 | 22 | B.1.243 | 0.001531 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 22 | 22 | B.1.258 | 0.001464 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 22 | 22 | B.1.369 | 0.006275 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 21 | 21 | B.1.1.385 | 0.09375 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 21 | 21 | Q.1 | 0.002653 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 20 | 20 | B.1.1.70 | 0.006821 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 19 | 19 | Q.3 | 0.002756 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 18 | 18 | AY.6 | 0.00074 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 18 | 18 | B.1.36 | 0.002626 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 18 | 18 | B.1.606 | 0.108434 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 17 | 17 | AY.29 | 0.000268 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 17 | 17 | AY.99.2 | 0.001567 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 16 | 16 | AY.42 | 0.000644 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 16 | 16 | B.1.637 | 0.001169 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 15 | 15 | AY.33 | 0.001002 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 15 | 15 | AY.7.1 | 0.001691 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 15 | 15 | AY.98.1 | 0.000726 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 15 | 15 | B.1.177.74 | 0.227273 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 15 | 15 | P.1.17 | 0.002426 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 14 | 14 | AY.120.2 | 0.017995 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 14 | 14 | B.1.1.28 | 0.004357 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 14 | 14 | B.1.36.24 | 0.08642 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 14 | 14 | R.1 | 0.00126 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 13 | 13 | AY.27 | 0.000841 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 13 | 13 | B.1.1.519 | 0.000516 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 13 | 13 | B.1.396 | 0.009174 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | AY.113 | 0.001709 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | AY.117 | 0.001014 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | AY.20 | 0.000466 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | AY.98 | 0.000948 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | B.1.1.1 | 0.00392 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | B.1.1.222 | 0.002448 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | B.1.1.284 | 0.001289 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 12 | 12 | C.37 | 0.001393 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 11 | 11 | AY.39.1 | 0.000436 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 11 | 11 | AY.4.2.1 | 0.001639 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 10 | 10 | B.1.177.4 | 0.002111 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 10 | 10 | B.1.214.2 | 0.005995 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 10 | 10 | B.1.371 | 0.011223 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 10 | 10 | B.1.9.4 | 0.06135 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 9 | 9 | AY.36 | 0.001334 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 9 | 9 | B.1.1.244 | 0.138462 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 9 | 9 | B.1.177.17 | 0.007389 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 9 | 9 | B.1.258.17 | 0.000936 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 9 | 9 | B.1.466.2 | 0.003521 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 9 | 9 | P.1.1 | 0.002859 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | AY.100 | 0.000368 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | AY.3.1 | 0.000682 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | AY.46 | 0.000833 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | AY.9.2 | 0.000294 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | B.1.1.33 | 0.003367 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | B.1.311 | 0.002197 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 8 | 8 | B.1.438.1 | 0.000858 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | AY.24 | 0.003017 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.1.141 | 0.014085 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.177.12 | 0.001062 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.177.8 | 0.005267 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.36.29 | 0.003621 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.427 | 0.000353 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.470 | 0.009831 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.575 | 0.002124 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | B.1.619.1 | 0.00449 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 7 | 7 | P.1.14 | 0.000335 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | AY.121 | 0.000812 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | AY.19 | 0.006842 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | AY.46.6 | 0.000433 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | AY.61 | 0.000629 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | B.1.1.306 | 0.00263 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | B.1.210 | 0.012793 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | C.14 | 0.025974 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 6 | 6 | P.1.10 | 0.001617 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | AY.34 | 0.000485 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | AY.81 | 0.00996 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | AY.9.1 | 0.000419 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.1.37 | 0.000964 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.1.432 | 0.006329 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.177.15 | 0.003155 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.177.7 | 0.000824 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.320 | 0.006227 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.391 | 0.005637 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.525 | 0.000566 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 5 | 5 | B.1.617.1 | 0.000645 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | A.2.5 | 0.001996 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | AY.16 | 0.001519 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | AY.84 | 0.00175 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | AY.85 | 0.001709 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B | 0.000511 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.1.214 | 0.000222 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.1.277 | 0.003035 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.1.485 | 0.066667 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.1.63 | 0.001543 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.177.82 | 0.001909 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.337 | 0.022346 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | B.1.375 | 0.003279 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 4 | D.2 | 0.000225 |
| ORF1ab/nsp15A1-B | 205 | P205S | CcC | TcT | 1 | 4 | D.2 | 0.000075 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 4 | 4 | P.1.16 | 0.001496 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.106 | 0.001005 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.12 | 0.000948 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.13 | 0.000483 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.2 | 0.001068 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.45 | 0.000365 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.54 | 0.000286 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.62 | 0.001307 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.69 | 0.00056 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.72 | 0.004082 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | AY.91 | 0.002191 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.1.50 | 0.002037 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.177.65 | 0.001996 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.240 | 0.000647 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.499 | 0.003151 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.596 | 0.000261 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.631 | 0.010101 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | B.1.9 | 0.018519 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | P.1.15 | 0.000697 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | P.1.7 | 0.000958 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 3 | 3 | P.2 | 0.00056 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | A.2.5.1 | 0.009615 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AE.8 | 0.000978 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.116.1 | 0.000623 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.16.1 | 0.00094 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.29.1 | 0.000441 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.35 | 0.000466 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.39.2 | 0.003082 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.4.3 | 0.001684 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.46.3 | 0.001867 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.5.3 | 0.000675 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.51 | 0.001818 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.75 | 0.000112 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.75.1 | 0.000361 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.9.2.1 | 0.003953 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AY.95 | 0.001522 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | AZ.2 | 0.001642 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.1.205 | 0.007435 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.1.258 | 0.006515 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.1.317 | 0.000823 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.1.39 | 0.001019 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.177.16 | 0.001329 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.189 | 0.008584 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.214.1 | 0.04 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.232 | 0.001075 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.258.3 | 0.00335 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.351.5 | 0.001199 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.36.16 | 0.002849 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.36.18 | 0.00084 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.361 | 0.002577 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.362.2 | 0.009434 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.399 | 0.003868 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.416 | 0.002538 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.456 | 0.006536 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.517 | 0.000854 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.524 | 0.002813 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.558 | 0.009132 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.568 | 0.002222 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.577 | 0.001375 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.619 | 0.001742 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.1.628 | 0.000705 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | B.35 | 0.015625 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | C.3 | 0.015267 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | P.1.12 | 0.000968 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 2 | 2 | Q.4 | 0.00091 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | A | 0.000387 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | A.2 | 0.000662 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | A.27 | 0.001656 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | A.29 | 0.005319 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | A.3 | 0.002096 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AA.7 | 0.009174 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AD.2 | 0.000219 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AE.4 | 0.043478 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AK.2 | 0.045455 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AT.1 | 0.005128 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AU.2 | 0.002421 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.1 | 0.000396 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.10 | 0.00053 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.101 | 0.00049 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.105 | 0.000643 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.109 | 0.00074 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.11 | 0.001339 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.110 | 0.000113 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.116 | 0.000287 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.120.2.1 | 0.000498 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.23.1 | 0.000417 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.46.2 | 0.000635 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.46.5 | 0.000198 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.5.4 | 0.000277 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.53 | 0.000288 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.55 | 0.000917 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.56 | 0.001605 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.58 | 0.000907 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.59 | 0.00053 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.66 | 0.00107 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.7 | 0.000196 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.71 | 0.000475 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.83 | 0.001724 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.87 | 0.000833 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.92 | 0.000287 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.93 | 0.000273 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | AY.99 | 0.001049 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.16 | 0.055556 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.174 | 0.003378 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.216 | 0.00089 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.220 | 0.001859 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.240 | 0.004695 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.263 | 0.001558 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.280 | 0.003086 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.318 | 0.000302 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.333 | 0.001076 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.34 | 0.013158 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.348 | 0.000796 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.349 | 0.010309 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.416 | 0.000905 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.433 | 0.001425 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.448 | 0.002033 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.458 | 0.041667 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.53 | 0.013699 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.1.55 | 0.012987 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.110 | 0.004525 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.128 | 0.000635 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.147 | 0.000756 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.42 | 0.000894 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.45 | 0.000381 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.48 | 0.003125 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.53 | 0.002392 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.54 | 0.000606 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.56 | 0.000668 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.57 | 0.000281 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.60 | 0.000218 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.69 | 0.001484 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.72 | 0.00339 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.177.83 | 0.001481 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.199 | 0.004132 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.22 | 0.001318 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.221.3 | 0.000833 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.221.4 | 0.004167 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.222 | 0.001692 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.223 | 0.002778 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.237 | 0.004975 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.247 | 0.014925 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.281 | 0.021739 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.349 | 0.000715 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.351.2 | 0.000303 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.351.3 | 0.000876 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.36.17 | 0.000494 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.367 | 0.000792 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.380 | 0.006623 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.400 | 0.000429 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.459 | 0.004082 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.468 | 0.005714 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.517.1 | 0.005263 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.561 | 0.000397 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.564 | 0.000426 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.582 | 0.000491 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.588 | 0.00091 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.609 | 0.000479 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.1.623 | 0.000536 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.23 | 0.002924 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.28 | 0.003279 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.3 | 0.000831 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.31 | 0.003731 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.38 | 0.02381 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.52 | 0.010101 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | B.55 | 0.00295 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | C.1 | 0.002392 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | C.36.3 | 0.000567 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | N.3 | 0.005814 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | P.1.8 | 0.004785 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | U.3 | 0.003861 |
| ORF1ab/nsp15A1-B | 205 | P205S | Ccc | Tcc | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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