CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = N73Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B73N73YN6525YnonsynAatTat33320.96969719837-19839
ORF1ab/nsp15A1-B73N73YN6525YnonsynAaTTaC3310.03030319837-19839

Details of the mutation N73Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B73N73YAatTat3233All0.000006
ORF1ab/nsp15A1-B73N73YAaTTaC133All0
ORF1ab/nsp15A1-B73N73YAatTat66AY.3.10.000512
ORF1ab/nsp15A1-B73N73YAatTat45B.1.1.70.000004
ORF1ab/nsp15A1-B73N73YAaTTaC15B.1.1.70.000001
ORF1ab/nsp15A1-B73N73YAatTat22AY.250.000012
ORF1ab/nsp15A1-B73N73YAatTat22AY.30.00002
ORF1ab/nsp15A1-B73N73YAatTat22AY.390.000049
ORF1ab/nsp15A1-B73N73YAatTat22AY.4.30.001684
ORF1ab/nsp15A1-B73N73YAatTat22AY.440.000012
ORF1ab/nsp15A1-B73N73YAatTat11AY.1030.000006
ORF1ab/nsp15A1-B73N73YAatTat11AY.1210.000135
ORF1ab/nsp15A1-B73N73YAatTat11AY.230.00007
ORF1ab/nsp15A1-B73N73YAatTat11AY.290.000016
ORF1ab/nsp15A1-B73N73YAatTat11AY.300.000396
ORF1ab/nsp15A1-B73N73YAatTat11AY.350.000233
ORF1ab/nsp15A1-B73N73YAatTat11AY.430.000004
ORF1ab/nsp15A1-B73N73YAatTat11AY.610.000105
ORF1ab/nsp15A1-B73N73YAatTat11AY.99.20.000092
ORF1ab/nsp15A1-B73N73YAatTat11B.1.4290.000024
ORF1ab/nsp15A1-B73N73YAatTat11D.20.000075
ORF1ab/nsp15A1-B73N73YAatTat11P.10.000016