CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = M271L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B271M271LM6723LnonsynAtgTtg31250.80645220431-20433
ORF1ab/nsp15A1-B271M271LM6723LnonsynAtgCtg3130.096774220431-20433
ORF1ab/nsp15A1-B271M271LM6723LnonsynAtGTtA3120.064516120431-20433
ORF1ab/nsp15A1-B271M271LM6723LnonsynAtGCtT3110.032258120431-20433

Details of the mutation M271L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B271M271LAtgTtg2531All0.000005
ORF1ab/nsp15A1-B271M271LAtgCtg331All0.000001
ORF1ab/nsp15A1-B271M271LAtGTtA231All0
ORF1ab/nsp15A1-B271M271LAtGCtT131All0
ORF1ab/nsp15A1-B271M271LAtgTtg77P.10.00011
ORF1ab/nsp15A1-B271M271LAtgTtg55AE.80.002445
ORF1ab/nsp15A1-B271M271LAtgTtg23B.10.000018
ORF1ab/nsp15A1-B271M271LAtGTtA13B.10.000009
ORF1ab/nsp15A1-B271M271LAtgTtg23B.1.10.000036
ORF1ab/nsp15A1-B271M271LAtGTtA13B.1.10.000018
ORF1ab/nsp15A1-B271M271LAtgTtg22B.1.1.70.000002
ORF1ab/nsp15A1-B271M271LAtgCtg12B.1.4160.001269
ORF1ab/nsp15A1-B271M271LAtGCtT12B.1.4160.001269
ORF1ab/nsp15A1-B271M271LAtgTtg12B.6.60.000889
ORF1ab/nsp15A1-B271M271LAtgCtg12B.6.60.000889
ORF1ab/nsp15A1-B271M271LAtgTtg110.055556
ORF1ab/nsp15A1-B271M271LAtgTtg11AY.250.000006
ORF1ab/nsp15A1-B271M271LAtgTtg11AY.30.00001
ORF1ab/nsp15A1-B271M271LAtgTtg11AY.430.000004
ORF1ab/nsp15A1-B271M271LAtgTtg11B.1.1.3720.000689
ORF1ab/nsp15A1-B271M271LAtgTtg11B.1.1600.000031
ORF1ab/nsp15A1-B271M271LAtgCtg11D.20.000075