CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = L311X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B311L311XL6763XnonsyntTatGa750.71428620551-20553
ORF1ab/nsp15A1-B311L311XL6763XnonsyntTatAa710.14285720551-20553
ORF1ab/nsp15A1-B311L311XL6763XnonsyntTAtAG710.14285720551-20553

Details of the mutation L311X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B311L311XtTatGa57All0.000001
ORF1ab/nsp15A1-B311L311XtTatAa17All0
ORF1ab/nsp15A1-B311L311XtTAtAG17All0
ORF1ab/nsp15A1-B311L311XtTatGa22B.1.617.20.000008
ORF1ab/nsp15A1-B311L311XtTatGa11AY.1030.000006
ORF1ab/nsp15A1-B311L311XtTAtAG11AY.440.000006
ORF1ab/nsp15A1-B311L311XtTatAa11B.1.10.000018
ORF1ab/nsp15A1-B311L311XtTatGa11B.1.1.70.000001
ORF1ab/nsp15A1-B311L311XtTatGa11P.20.000187