CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = L311L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B311L311LL6763LsynttAttG9478970.94720220551-20553
ORF1ab/nsp15A1-B311L311LL6763LsynTtaCta947500.052798320551-20553

Details of the mutation L311L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B311L311LttAttG897947All0.000172
ORF1ab/nsp15A1-B311L311LTtaCta50947All0.00001
ORF1ab/nsp15A1-B311L311LttAttG459467B.1.1.70.000411
ORF1ab/nsp15A1-B311L311LTtaCta8467B.1.1.70.000007
ORF1ab/nsp15A1-B311L311LttAttG135137AY.40.00021
ORF1ab/nsp15A1-B311L311LTtaCta2137AY.40.000003
ORF1ab/nsp15A1-B311L311LttAttG8989B.1.5071
ORF1ab/nsp15A1-B311L311LTtaCta3030AY.120.2.10.014948
ORF1ab/nsp15A1-B311L311LttAttG2323B.1.617.20.000087
ORF1ab/nsp15A1-B311L311LttAttG1717B.10.000156
ORF1ab/nsp15A1-B311L311LttAttG1314B.1.20.000114
ORF1ab/nsp15A1-B311L311LTtaCta114B.1.20.000009
ORF1ab/nsp15A1-B311L311LttAttG1112AY.250.000066
ORF1ab/nsp15A1-B311L311LTtaCta112AY.250.000006
ORF1ab/nsp15A1-B311L311LttAttG1010AY.1020.000265
ORF1ab/nsp15A1-B311L311LttAttG1010AY.30.000099
ORF1ab/nsp15A1-B311L311LttAttG910AY.4.20.000195
ORF1ab/nsp15A1-B311L311LTtaCta110AY.4.20.000022
ORF1ab/nsp15A1-B311L311LttAttG1010AY.60.000411
ORF1ab/nsp15A1-B311L311LttAttG68P.10.000095
ORF1ab/nsp15A1-B311L311LTtaCta28P.10.000032
ORF1ab/nsp15A1-B311L311LttAttG77AY.420.000282
ORF1ab/nsp15A1-B311L311LttAttG77AY.430.000031
ORF1ab/nsp15A1-B311L311LttAttG77AY.440.000043
ORF1ab/nsp15A1-B311L311LttAttG77B.1.6370.000512
ORF1ab/nsp15A1-B311L311LttAttG56AY.1030.000031
ORF1ab/nsp15A1-B311L311LTtaCta16AY.1030.000006
ORF1ab/nsp15A1-B311L311LttAttG66B.1.5260.000141
ORF1ab/nsp15A1-B311L311LttAttG55P.1.150.001162
ORF1ab/nsp15A1-B311L311LttAttG44B.1.1.280.001245
ORF1ab/nsp15A1-B311L311LttAttG33AY.1200.000112
ORF1ab/nsp15A1-B311L311LttAttG33AY.390.000074
ORF1ab/nsp15A1-B311L311LttAttG33AY.90.000203
ORF1ab/nsp15A1-B311L311LttAttG33AY.9.10.000251
ORF1ab/nsp15A1-B311L311LttAttG33B.1.177.70.000495
ORF1ab/nsp15A1-B311L311LttAttG33B.1.4290.000071
ORF1ab/nsp15A1-B311L311LttAttG22AY.1000.000092
ORF1ab/nsp15A1-B311L311LttAttG22AY.200.000078
ORF1ab/nsp15A1-B311L311LttAttG22AY.260.000057
ORF1ab/nsp15A1-B311L311LttAttG22AY.460.000208
ORF1ab/nsp15A1-B311L311LttAttG22B.1.10.000036
ORF1ab/nsp15A1-B311L311LttAttG11A.2.20.001689
ORF1ab/nsp15A1-B311L311LttAttG11AY.1140.000231
ORF1ab/nsp15A1-B311L311LttAttG11AY.29.10.000221
ORF1ab/nsp15A1-B311L311LTtaCta11AY.300.000396
ORF1ab/nsp15A1-B311L311LttAttG11AY.400.000964
ORF1ab/nsp15A1-B311L311LttAttG11AY.450.000122
ORF1ab/nsp15A1-B311L311LttAttG11AY.470.000031
ORF1ab/nsp15A1-B311L311LttAttG11AY.5.30.000337
ORF1ab/nsp15A1-B311L311LttAttG11AY.610.000105
ORF1ab/nsp15A1-B311L311LttAttG11AY.750.000056
ORF1ab/nsp15A1-B311L311LttAttG11AY.920.000287
ORF1ab/nsp15A1-B311L311LttAttG11AY.980.000079
ORF1ab/nsp15A1-B311L311LttAttG11AY.98.10.000048
ORF1ab/nsp15A1-B311L311LttAttG11AY.990.001049
ORF1ab/nsp15A1-B311L311LttAttG11B.1.1.4320.001266
ORF1ab/nsp15A1-B311L311LttAttG11B.1.1770.000013
ORF1ab/nsp15A1-B311L311LttAttG11B.1.177.40.000211
ORF1ab/nsp15A1-B311L311LttAttG11B.1.2340.000132
ORF1ab/nsp15A1-B311L311LttAttG11B.1.2430.00007
ORF1ab/nsp15A1-B311L311LTtaCta11B.1.258.170.000104
ORF1ab/nsp15A1-B311L311LTtaCta11B.1.3110.000275
ORF1ab/nsp15A1-B311L311LttAttG11B.1.3490.000715
ORF1ab/nsp15A1-B311L311LttAttG11B.1.36.290.000517
ORF1ab/nsp15A1-B311L311LTtaCta11B.1.3890.001002
ORF1ab/nsp15A1-B311L311LttAttG11B.1.4090.000781
ORF1ab/nsp15A1-B311L311LttAttG11B.1.5170.000427
ORF1ab/nsp15A1-B311L311LttAttG11B.1.5960.000087
ORF1ab/nsp15A1-B311L311LttAttG11B.1.6210.000089
ORF1ab/nsp15A1-B311L311LttAttG11B.1.6230.000536
ORF1ab/nsp15A1-B311L311LttAttG11B.1.6390.021739
ORF1ab/nsp15A1-B311L311LttAttG11B.1.9.40.006135
ORF1ab/nsp15A1-B311L311LttAttG11B.6.40.045455
ORF1ab/nsp15A1-B311L311LttAttG11Q.10.000126