CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = L216S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B216L216SL6668SnonsyntTatCa68670.98529420266-20268
ORF1ab/nsp15A1-B216L216SL6668SnonsyntTAtCG6810.014705920266-20268

Details of the mutation L216S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B216L216StTatCa6768All0.000013
ORF1ab/nsp15A1-B216L216StTAtCG168All0
ORF1ab/nsp15A1-B216L216StTatCa1515AY.250.00009
ORF1ab/nsp15A1-B216L216StTatCa1414AY.30.000139
ORF1ab/nsp15A1-B216L216StTatCa1212AY.1060.004019
ORF1ab/nsp15A1-B216L216StTatCa55B.1.617.20.000019
ORF1ab/nsp15A1-B216L216StTatCa44AY.430.000018
ORF1ab/nsp15A1-B216L216StTatCa33B.1.20.000026
ORF1ab/nsp15A1-B216L216StTatCa22AY.390.000049
ORF1ab/nsp15A1-B216L216StTatCa22AY.440.000012
ORF1ab/nsp15A1-B216L216StTatCa22AY.460.000208
ORF1ab/nsp15A1-B216L216StTatCa22B.1.1.70.000002
ORF1ab/nsp15A1-B216L216StTatCa11AY.1030.000006
ORF1ab/nsp15A1-B216L216StTatCa11AY.1090.00074
ORF1ab/nsp15A1-B216L216StTatCa11AY.40.000002
ORF1ab/nsp15A1-B216L216StTatCa11AY.590.00053
ORF1ab/nsp15A1-B216L216StTAtCG11B.10.000009
ORF1ab/nsp15A1-B216L216StTatCa11B.1.1.2140.000055
ORF1ab/nsp15A1-B216L216StTatCa11B.1.1.3480.000796