CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = K259R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B259K259RK6711RnonsynaAgaGg24889248780.99955820395-20397
ORF1ab/nsp15A1-B259K259RK6711RnonsynaAGaGA24889110.00044196220395-20397

Details of the mutation K259R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B259K259RaAgaGg2487824889All0.004758
ORF1ab/nsp15A1-B259K259RaAGaGA1124889All0.000002
ORF1ab/nsp15A1-B259K259RaAgaGg88738879B.1.617.20.033411
ORF1ab/nsp15A1-B259K259RaAGaGA68879B.1.617.20.000023
ORF1ab/nsp15A1-B259K259RaAgaGg72797282B.1.617.10.938741
ORF1ab/nsp15A1-B259K259RaAGaGA37282B.1.617.10.000387
ORF1ab/nsp15A1-B259K259RaAgaGg41354135AY.350.963645
ORF1ab/nsp15A1-B259K259RaAgaGg16861686AY.480.784186
ORF1ab/nsp15A1-B259K259RaAgaGg517518AY.16.10.242951
ORF1ab/nsp15A1-B259K259RaAGaGA1518AY.16.10.00047
ORF1ab/nsp15A1-B259K259RaAgaGg377377AY.40.000587
ORF1ab/nsp15A1-B259K259RaAgaGg205205AY.440.001248
ORF1ab/nsp15A1-B259K259RaAgaGg203203B.10.001859
ORF1ab/nsp15A1-B259K259RaAgaGg176176AY.130.028332
ORF1ab/nsp15A1-B259K259RaAgaGg127128AY.1080.140022
ORF1ab/nsp15A1-B259K259RaAGaGA1128AY.1080.001103
ORF1ab/nsp15A1-B259K259RaAgaGg9898AY.230.006835
ORF1ab/nsp15A1-B259K259RaAgaGg9797AY.1030.000602
ORF1ab/nsp15A1-B259K259RaAgaGg7777B.1.1.70.000069
ORF1ab/nsp15A1-B259K259RaAgaGg7373B.1.1770.000961
ORF1ab/nsp15A1-B259K259RaAgaGg5757AY.590.030191
ORF1ab/nsp15A1-B259K259RaAgaGg5757AY.920.016375
ORF1ab/nsp15A1-B259K259RaAgaGg4444AY.980.003476
ORF1ab/nsp15A1-B259K259RaAgaGg4343AY.540.0041
ORF1ab/nsp15A1-B259K259RaAgaGg3939AY.660.041711
ORF1ab/nsp15A1-B259K259RaAgaGg3737AY.430.000164
ORF1ab/nsp15A1-B259K259RaAgaGg3636AY.190.041049
ORF1ab/nsp15A1-B259K259RaAgaGg3030AY.750.001681
ORF1ab/nsp15A1-B259K259RaAgaGg3030B.1.2140.10989
ORF1ab/nsp15A1-B259K259RaAgaGg2828AY.370.00885
ORF1ab/nsp15A1-B259K259RaAgaGg2828B.1.177.550.065268
ORF1ab/nsp15A1-B259K259RaAgaGg2424B.1.1.5190.000953
ORF1ab/nsp15A1-B259K259RaAgaGg2121AY.5.40.005811
ORF1ab/nsp15A1-B259K259RaAgaGg1818AY.1160.005162
ORF1ab/nsp15A1-B259K259RaAgaGg1818AY.390.000445
ORF1ab/nsp15A1-B259K259RaAgaGg1818B.1.36.290.009312
ORF1ab/nsp15A1-B259K259RaAgaGg1616AY.250.000096
ORF1ab/nsp15A1-B259K259RaAgaGg1616P.20.002986
ORF1ab/nsp15A1-B259K259RaAgaGg1515AY.470.000467
ORF1ab/nsp15A1-B259K259RaAgaGg1313AY.610.001362
ORF1ab/nsp15A1-B259K259RaAgaGg1313AY.680.003559
ORF1ab/nsp15A1-B259K259RaAgaGg1313B.1.10.000236
ORF1ab/nsp15A1-B259K259RaAgaGg1111AY.200.000428
ORF1ab/nsp15A1-B259K259RaAgaGg1111AY.620.004793
ORF1ab/nsp15A1-B259K259RaAgaGg1111B.1.20.000097
ORF1ab/nsp15A1-B259K259RaAgaGg1010AY.4.2.10.00149
ORF1ab/nsp15A1-B259K259RaAgaGg1010AY.520.008143
ORF1ab/nsp15A1-B259K259RaAgaGg1010AY.550.009174
ORF1ab/nsp15A1-B259K259RaAgaGg1010P.10.000158
ORF1ab/nsp15A1-B259K259RaAgaGg99AY.1210.001218
ORF1ab/nsp15A1-B259K259RaAgaGg99B.1.4290.000212
ORF1ab/nsp15A1-B259K259RaAgaGg88AY.1180.000501
ORF1ab/nsp15A1-B259K259RaAgaGg88AY.240.003448
ORF1ab/nsp15A1-B259K259RaAgaGg88AY.770.009019
ORF1ab/nsp15A1-B259K259RaAgaGg88AY.9.20.000294
ORF1ab/nsp15A1-B259K259RaAgaGg88B.1.177.810.001515
ORF1ab/nsp15A1-B259K259RaAgaGg88P.1.70.002554
ORF1ab/nsp15A1-B259K259RaAgaGg77AY.870.005828
ORF1ab/nsp15A1-B259K259RaAgaGg77B.1.1.3730.166667
ORF1ab/nsp15A1-B259K259RaAgaGg66AY.640.003571
ORF1ab/nsp15A1-B259K259RaAgaGg66AY.98.10.000291
ORF1ab/nsp15A1-B259K259RaAgaGg66B0.000767
ORF1ab/nsp15A1-B259K259RaAgaGg55AY.1000.00023
ORF1ab/nsp15A1-B259K259RaAgaGg55AY.4.50.000537
ORF1ab/nsp15A1-B259K259RaAgaGg55AY.420.000201
ORF1ab/nsp15A1-B259K259RaAgaGg55AY.450.000608
ORF1ab/nsp15A1-B259K259RaAgaGg44AY.1020.000106
ORF1ab/nsp15A1-B259K259RaAgaGg44AY.1170.000338
ORF1ab/nsp15A1-B259K259RaAgaGg44AY.30.00004
ORF1ab/nsp15A1-B259K259RaAgaGg44AY.50.000083
ORF1ab/nsp15A1-B259K259RaAgaGg44AY.560.006421
ORF1ab/nsp15A1-B259K259RaAgaGg44AY.880.003537
ORF1ab/nsp15A1-B259K259RaAgaGg44B.1.2430.000278
ORF1ab/nsp15A1-B259K259RaAgaGg33A0.001161
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.1190.000106
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.220.006276
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.260.000085
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.4.20.000065
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.460.000312
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.530.000863
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.710.001425
ORF1ab/nsp15A1-B259K259RaAgaGg33AY.780.004622
ORF1ab/nsp15A1-B259K259RaAgaGg33B.1.1.2140.000166
ORF1ab/nsp15A1-B259K259RaAgaGg33B.1.1600.000094
ORF1ab/nsp15A1-B259K259RaAgaGg33B.1.177.730.001699
ORF1ab/nsp15A1-B259K259RaAgaGg33B.1.36.180.001261
ORF1ab/nsp15A1-B259K259RaAgaGg33B.1.3620.004622
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.100.00106
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.1010.000981
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.1060.00067
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.110.002677
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.290.000032
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.670.000929
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.700.000417
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.740.000231
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.820.002714
ORF1ab/nsp15A1-B259K259RaAgaGg22AY.90.000135
ORF1ab/nsp15A1-B259K259RaAgaGg22B.1.1570.00597
ORF1ab/nsp15A1-B259K259RaAgaGg22B.1.258.30.00335
ORF1ab/nsp15A1-B259K259RaAgaGg22B.1.3510.000059
ORF1ab/nsp15A1-B259K259RaAgaGg22B.1.360.000292
ORF1ab/nsp15A1-B259K259RaAgaGg22C.370.000232
ORF1ab/nsp15A1-B259K259RaAgaGg22D.20.00015
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.120.000316
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.160.00038
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.270.000065
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.280.00189
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.3.10.000085
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.320.000532
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.330.000067
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.380.000499
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.39.10.00004
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.410.000294
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.5.30.000337
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.510.000909
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.580.000907
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.7.10.000113
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.75.10.00018
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.850.000427
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.930.000273
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.950.000761
ORF1ab/nsp15A1-B259K259RaAgaGg11AY.99.20.000092
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.1.2940.001266
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.1.3010.001179
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.1.3060.000438
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.1.3260.001761
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.1.330.000421
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.1100.004525
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.177.150.000631
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.177.190.001431
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.177.240.001295
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.177.330.001645
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.177.40.000211
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.2210.000071
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.3690.000285
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.438.10.000107
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.4560.003268
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.5170.000427
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.5370.02
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.5760.000907
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.5960.000087
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.6210.000089
ORF1ab/nsp15A1-B259K259RaAgaGg11B.1.830.015385
ORF1ab/nsp15A1-B259K259RaAgaGg11C.140.004329
ORF1ab/nsp15A1-B259K259RaAgaGg11C.180.002591
ORF1ab/nsp15A1-B259K259RaAgaGg11P.1.120.000484
ORF1ab/nsp15A1-B259K259RaAgaGg11P.1.140.000048
ORF1ab/nsp15A1-B259K259RaAgaGg11P.1.150.000232
ORF1ab/nsp15A1-B259K259RaAgaGg11P.1.160.000374
ORF1ab/nsp15A1-B259K259RaAgaGg11Q.80.000165
ORF1ab/nsp15A1-B259K259RaAgaGg11R.10.00009