CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = K12N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp15A1-B	12	K12N	K6464N	nonsyn	aaG	aaT	5194	5165	0.994417	19654-19656
ORF1ab/nsp15A1-B	12	K12N	K6464N	nonsyn	aaG	aaC	5194	29	0.00558337	19654-19656

Details of the mutation K12N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5165	5194	All	0.000988
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	29	5194	All	0.000006
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1043	1049	AY.4	0.001623
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	6	1049	AY.4	0.000009
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	414	414	AY.3	0.004118
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	390	395	B.1.1.7	0.000349
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	5	395	B.1.1.7	0.000004
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	273	273	B.1.617.2	0.001028
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	269	271	AY.43	0.001192
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	2	271	AY.43	0.000009
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	241	241	AY.25	0.00145
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	207	207	B.1.2	0.001823
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	114	114	AY.44	0.000694
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	107	108	B.1.427	0.005403
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	108	B.1.427	0.00005
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	100	100	AY.5	0.002065
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	84	84	AY.46.5	0.016667
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	83	83	AY.103	0.000515
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	78	78	B.1.1	0.001415
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	65	65	B.1.516	0.127202
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	62	62	B.1.258	0.004126
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	59	59	AY.59	0.03125
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	59	59	AY.7.1	0.006649
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	56	59	B.1.526	0.001316
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	3	59	B.1.526	0.000071
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	53	55	P.1	0.000835
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	2	55	P.1	0.000032
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	52	53	B.1	0.000476
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	53	B.1	0.000009
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	48	48	B.1.429	0.001129
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	45	45	B.1.1.229	0.258621
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	41	41	N.9	0.244048
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	38	38	B.1.351	0.00113
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	36	36	AY.102	0.000955
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	36	36	B.1.1.347	0.654545
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	34	34	AY.20	0.001321
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	34	34	P.1.17	0.0055
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	33	33	B.1.177	0.000435
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	32	32	B.1.126	0.040816
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	31	31	C.36.3	0.017584
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	30	30	AY.13	0.004829
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	30	30	AY.47	0.000933
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	30	30	B.1.36	0.004377
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	28	28	AY.52	0.022801
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	25	25	B.1.637	0.001827
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	23	23	AY.14	0.002024
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	23	23	AY.39	0.000568
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	22	22	B.1.1.28	0.006847
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	22	22	B.1.596.1	0.205607
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	19	19	AY.23	0.001325
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	19	19	AY.61	0.001991
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	18	18	B.1.160	0.000561
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	18	18	B.1.221	0.001279
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	17	17	B.1.177.86	0.003119
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	17	17	B.1.36.36	0.010235
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	16	16	AY.33	0.001068
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	16	16	B.1.617.1	0.002063
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	14	15	AY.26	0.000396
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	15	AY.26	0.000028
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	15	15	P.2	0.0028
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	14	14	AY.29	0.000221
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	14	14	B.1.422	0.011373
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	13	13	AY.100	0.000598
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	12	13	B.1.1.519	0.000477
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	13	B.1.1.519	0.00004
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	12	12	AY.3.1	0.001023
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	12	12	AY.42	0.000483
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	11	11	B.1.1.10	0.012263
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	10	10	AY.119	0.000353
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	10	10	AY.4.2	0.000217
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	10	10	B.1.177.87	0.007278
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	9	9	AY.118	0.000564
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	9	9	AY.53	0.002588
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	9	9	B.1.1.70	0.00307
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	8	8	AY.46.3	0.00747
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	8	8	AY.54	0.000763
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	8	8	AY.75	0.000448
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	8	8	AY.93	0.002185
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	8	8	B.1.177.50	0.037559
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	7	7	AY.16	0.002658
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	7	AY.39.1	0.000238
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	7	AY.39.1	0.00004
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	7	7	B.1.1.393	0.777778
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	AY.120	0.000223
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	AY.6	0.000247
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	AY.75.1	0.001082
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	AY.98.1	0.000291
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	B.1.1.311	0.002149
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	B.1.1.37	0.001157
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	B.1.1.406	0.038961
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	B.1.628	0.002114
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	6	6	P.1.7	0.001916
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	AD.2	0.001095
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	AY.106	0.001674
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	AY.46	0.00052
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	AY.78	0.007704
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	B.1.1.239	0.16129
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	B.1.1.306	0.002192
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	B.1.369	0.001426
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	5	5	B.1.596	0.000436
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.110	0.000451
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.116.1	0.001246
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.117	0.000338
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.22	0.008368
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.36	0.000593
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.46.6	0.000289
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.57	0.002625
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.7.2	0.002237
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	AY.98	0.000316
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	B.1.1.354	0.017544
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	B.1.234	0.000528
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	B.1.258.17	0.000416
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	4	4	B.1.36.31	0.007005
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	AY.116	0.00086
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	AY.30	0.001187
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	AY.70	0.000626
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B	0.000383
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.1.198	0.004405
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.1.284	0.000322
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.1.33	0.001263
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.1.83	0.00813
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.177.56	0.002003
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.218	0.015464
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.235	0.007557
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.243	0.000209
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.243.2	0.043478
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	2	3	B.1.311	0.000549
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	3	B.1.311	0.000275
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.39	0.011719
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	B.1.621	0.000266
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	C.37	0.000348
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	3	3	R.1	0.00027
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	A.1	0.000564
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	A.23.1	0.001408
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.107	0.000932
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.109	0.001479
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.121	0.000271
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.19	0.002281
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.34	0.000194
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.51	0.001818
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.7	0.000392
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.72	0.002721
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.77	0.002255
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.79	0.002421
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.9.2	0.000073
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.92	0.000575
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	AY.99.2	0.000184
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.1.216	0.001781
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.1.316	0.00185
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.1.317	0.000823
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.1.333	0.002153
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	2	2	B.1.177.65	0.001331
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.214.2	0.001199
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.240	0.000431
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.298	0.004228
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.336	0.004878
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.36.29	0.001035
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.400	0.000858
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	B.1.517	0.000854
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	C.2	0.032258
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	P.1.14	0.000096
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	2	2	W.4	0.002703
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	A.2.5	0.000499
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	A.2.5.1	0.004808
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	A.28	0.002646
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AT.1	0.005128
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.113	0.000142
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.114	0.000231
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.16.1	0.00047
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.2	0.000356
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.34.1	0.00051
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.35	0.000233
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	1	AY.38	0.000499
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.4.2.1	0.000149
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.4.3	0.000842
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.45	0.000122
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.5.3	0.000337
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.55	0.000917
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.56	0.001605
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.60	0.000938
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.65	0.000533
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.68	0.000274
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.71	0.000475
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.74	0.000116
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.84	0.000437
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.88	0.000884
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.9.1	0.000084
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	AY.99.1	0.001553
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.138	0.006061
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.171	0.003676
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.220	0.001859
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.312	0.001912
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.318	0.000302
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.337	0.003597
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.348	0.000796
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.388	0.045455
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.39	0.00051
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.398	0.003226
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.413	0.006897
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.416	0.000905
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.434	0.000349
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.448	0.002033
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.48	0.002874
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.487	0.005587
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.50	0.000679
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.513	0.012346
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.1.8	0.003584
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.160.14	0.002119
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.160.16	0.000929
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.177.7	0.000165
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.177.81	0.000189
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.177.82	0.000477
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.221.3	0.000833
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.320	0.001245
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.343	0.020833
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.349	0.000715
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.351.3	0.000876
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.351.5	0.0006
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.36.19	0.009259
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.36.8	0.001
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.366	0.004878
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.371	0.001122
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.389	0.001002
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.391	0.001127
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.397	0.004854
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.428	0.00102
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.453	0.003236
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.468	0.005714
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.495	0.009091
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.525	0.000113
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.528	0.047619
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.538	0.008065
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.540	0.009709
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.552	0.015152
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.561	0.000397
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.575.1	0.002439
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.576	0.000907
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.619	0.000871
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.622	0.012987
ORF1ab/nsp15A1-B	12	K12N	aaG	aaC	1	1	B.1.623	0.000536
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.1.78	0.008547
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	B.6.6	0.000889
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	D.2	0.000075
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	D.5	0.004975
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	P.1.10	0.000269
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	P.1.12	0.000484
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	P.1.15	0.000232
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	P.1.16	0.000374
ORF1ab/nsp15A1-B	12	K12N	aaG	aaT	1	1	P.6	0.003145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.