CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = I222S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B222I222SI6674SnonsynATtTCt6446170.95807520284-20286
ORF1ab/nsp15A1-B222I222SI6674SnonsynaTtaGt644270.041925520284-20286

Details of the mutation I222S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B222I222SATtTCt617644All0.000118
ORF1ab/nsp15A1-B222I222SaTtaGt27644All0.000005
ORF1ab/nsp15A1-B222I222SATtTCt281281B.1.177.230.909385
ORF1ab/nsp15A1-B222I222SATtTCt5757B.1.1600.001778
ORF1ab/nsp15A1-B222I222SATtTCt3838B.1.1.4340.013245
ORF1ab/nsp15A1-B222I222SATtTCt3233AY.40.00005
ORF1ab/nsp15A1-B222I222SaTtaGt133AY.40.000002
ORF1ab/nsp15A1-B222I222SATtTCt2526B.1.20.00022
ORF1ab/nsp15A1-B222I222SaTtaGt126B.1.20.000009
ORF1ab/nsp15A1-B222I222SATtTCt2424B.1.1.4500.827586
ORF1ab/nsp15A1-B222I222SATtTCt2021B.1.10.000363
ORF1ab/nsp15A1-B222I222SaTtaGt121B.1.10.000018
ORF1ab/nsp15A1-B222I222SATtTCt1719B.1.617.20.000064
ORF1ab/nsp15A1-B222I222SaTtaGt219B.1.617.20.000008
ORF1ab/nsp15A1-B222I222SATtTCt1717B.1.1.70.000015
ORF1ab/nsp15A1-B222I222SATtTCt1616AY.1030.000099
ORF1ab/nsp15A1-B222I222SATtTCt1212AY.440.000073
ORF1ab/nsp15A1-B222I222SATtTCt1010B.1.1770.000132
ORF1ab/nsp15A1-B222I222SATtTCt77AY.1210.000947
ORF1ab/nsp15A1-B222I222SaTtaGt67AY.9.20.00022
ORF1ab/nsp15A1-B222I222SATtTCt17AY.9.20.000037
ORF1ab/nsp15A1-B222I222SATtTCt35B.10.000027
ORF1ab/nsp15A1-B222I222SaTtaGt25B.10.000018
ORF1ab/nsp15A1-B222I222SATtTCt55B.400.001821
ORF1ab/nsp15A1-B222I222SATtTCt44AY.250.000024
ORF1ab/nsp15A1-B222I222SATtTCt44B.1.617.10.000516
ORF1ab/nsp15A1-B222I222SATtTCt33B.1.1.2140.000166
ORF1ab/nsp15A1-B222I222SATtTCt33B.1.1.2200.005576
ORF1ab/nsp15A1-B222I222SaTtaGt33B.1.5650.002431
ORF1ab/nsp15A1-B222I222SATtTCt22AY.1010.000981
ORF1ab/nsp15A1-B222I222SATtTCt22AY.1020.000053
ORF1ab/nsp15A1-B222I222SATtTCt22AY.230.000139
ORF1ab/nsp15A1-B222I222SATtTCt22AY.4.10.001475
ORF1ab/nsp15A1-B222I222SATtTCt22AY.430.000009
ORF1ab/nsp15A1-B222I222SATtTCt22B.1.1.10.000653
ORF1ab/nsp15A1-B222I222SATtTCt22B.1.1.500.001358
ORF1ab/nsp15A1-B222I222SATtTCt22B.1.160.200.017857
ORF1ab/nsp15A1-B222I222SaTtaGt22B.1.1670.015625
ORF1ab/nsp15A1-B222I222SaTtaGt22B.1.6370.000146
ORF1ab/nsp15A1-B222I222SATtTCt110.055556
ORF1ab/nsp15A1-B222I222SATtTCt11AY.200.000039
ORF1ab/nsp15A1-B222I222SATtTCt11AY.260.000028
ORF1ab/nsp15A1-B222I222SaTtaGt11AY.30.00001
ORF1ab/nsp15A1-B222I222SATtTCt11AY.4.20.000022
ORF1ab/nsp15A1-B222I222SATtTCt11AY.60.000041
ORF1ab/nsp15A1-B222I222SATtTCt11AY.750.000056
ORF1ab/nsp15A1-B222I222SATtTCt11B0.000128
ORF1ab/nsp15A1-B222I222SaTtaGt11B.1.1.1760.000439
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.1.1980.001468
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.1.3010.001179
ORF1ab/nsp15A1-B222I222SaTtaGt11B.1.1.4110.014706
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.1.5210.005348
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.1.630.000386
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.160.160.000929
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.177.440.000519
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.177.450.000381
ORF1ab/nsp15A1-B222I222SaTtaGt11B.1.177.500.004695
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.177.750.001041
ORF1ab/nsp15A1-B222I222SaTtaGt11B.1.2430.00007
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.258.170.000104
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.3510.00003
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.360.000146
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.36.170.000494
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.5260.000024
ORF1ab/nsp15A1-B222I222SaTtaGt11B.1.6090.000479
ORF1ab/nsp15A1-B222I222SATtTCt11B.1.6210.000089
ORF1ab/nsp15A1-B222I222SaTtaGt11B.1.780.008547
ORF1ab/nsp15A1-B222I222SATtTCt11Q.80.000165