CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = G17R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B17G17RG6469RnonsynGgaAga272827120.99413519669-19671
ORF1ab/nsp15A1-B17G17RG6469RnonsynGgaCga2728140.0051319719669-19671
ORF1ab/nsp15A1-B17G17RG6469RnonsynGgACgC272810.00036656919669-19671
ORF1ab/nsp15A1-B17G17RG6469RnonsynGgAAgG272810.00036656919669-19671

Details of the mutation G17R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B17G17RGgaAga27122728All0.000519
ORF1ab/nsp15A1-B17G17RGgaCga142728All0.000003
ORF1ab/nsp15A1-B17G17RGgAAgG12728All0
ORF1ab/nsp15A1-B17G17RGgACgC12728All0
ORF1ab/nsp15A1-B17G17RGgaAga19101910AY.1180.119659
ORF1ab/nsp15A1-B17G17RGgaAga259259B.1.1.3030.71547
ORF1ab/nsp15A1-B17G17RGgaAga221221AY.40.000344
ORF1ab/nsp15A1-B17G17RGgaAga3839B.1.1.70.000034
ORF1ab/nsp15A1-B17G17RGgaCga139B.1.1.70.000001
ORF1ab/nsp15A1-B17G17RGgaAga3232B.1.2800.228571
ORF1ab/nsp15A1-B17G17RGgaAga2728B.1.617.20.000102
ORF1ab/nsp15A1-B17G17RGgaCga128B.1.617.20.000004
ORF1ab/nsp15A1-B17G17RGgaAga2424AY.1030.000149
ORF1ab/nsp15A1-B17G17RGgaAga1616AY.250.000096
ORF1ab/nsp15A1-B17G17RGgaAga1414B.10.000128
ORF1ab/nsp15A1-B17G17RGgaAga1214B.1.20.000106
ORF1ab/nsp15A1-B17G17RGgaCga214B.1.20.000018
ORF1ab/nsp15A1-B17G17RGgaAga1010AY.1000.00046
ORF1ab/nsp15A1-B17G17RGgaAga1010AY.330.000668
ORF1ab/nsp15A1-B17G17RGgaAga1010AY.440.000061
ORF1ab/nsp15A1-B17G17RGgaAga99AY.390.000222
ORF1ab/nsp15A1-B17G17RGgaCga79AY.4.20.000152
ORF1ab/nsp15A1-B17G17RGgaAga29AY.4.20.000043
ORF1ab/nsp15A1-B17G17RGgaAga77AY.1100.000789
ORF1ab/nsp15A1-B17G17RGgaAga77AY.30.00007
ORF1ab/nsp15A1-B17G17RGgaAga77AY.450.000852
ORF1ab/nsp15A1-B17G17RGgaAga67B.1.10.000109
ORF1ab/nsp15A1-B17G17RGgACgC17B.1.10.000018
ORF1ab/nsp15A1-B17G17RGgaAga77P.10.00011
ORF1ab/nsp15A1-B17G17RGgaAga66AY.260.00017
ORF1ab/nsp15A1-B17G17RGgaAga55AY.290.000079
ORF1ab/nsp15A1-B17G17RGgaAga55AY.980.000395
ORF1ab/nsp15A1-B17G17RGgaAga55B.1.1.4160.004525
ORF1ab/nsp15A1-B17G17RGgaAga55P.20.000933
ORF1ab/nsp15A1-B17G17RGgaAga44AY.60.000165
ORF1ab/nsp15A1-B17G17RGgaAga33AY.160.001139
ORF1ab/nsp15A1-B17G17RGgaAga33AY.690.00056
ORF1ab/nsp15A1-B17G17RGgaAga33AY.920.000862
ORF1ab/nsp15A1-B17G17RGgaAga33B.1.1770.00004
ORF1ab/nsp15A1-B17G17RGgaAga120.055556
ORF1ab/nsp15A1-B17G17RGgAAgG120.055556
ORF1ab/nsp15A1-B17G17RGgaAga22AY.1020.000053
ORF1ab/nsp15A1-B17G17RGgaAga22AY.1170.000169
ORF1ab/nsp15A1-B17G17RGgaAga22AY.230.000139
ORF1ab/nsp15A1-B17G17RGgaAga22AY.4.10.001475
ORF1ab/nsp15A1-B17G17RGgaAga22AY.610.00021
ORF1ab/nsp15A1-B17G17RGgaAga22AY.790.002421
ORF1ab/nsp15A1-B17G17RGgaAga22AY.950.001522
ORF1ab/nsp15A1-B17G17RGgaAga22B.1.360.000292
ORF1ab/nsp15A1-B17G17RGgaAga22B.6.60.001778
ORF1ab/nsp15A1-B17G17RGgaAga11AU.10.001266
ORF1ab/nsp15A1-B17G17RGgaAga11AY.1040.001984
ORF1ab/nsp15A1-B17G17RGgaAga11AY.1050.000643
ORF1ab/nsp15A1-B17G17RGgaAga11AY.116.10.000311
ORF1ab/nsp15A1-B17G17RGgaAga11AY.200.000039
ORF1ab/nsp15A1-B17G17RGgaCga11AY.270.000065
ORF1ab/nsp15A1-B17G17RGgaAga11AY.39.10.00004
ORF1ab/nsp15A1-B17G17RGgaAga11AY.430.000004
ORF1ab/nsp15A1-B17G17RGgaAga11AY.460.000104
ORF1ab/nsp15A1-B17G17RGgaCga11AY.46.10.001027
ORF1ab/nsp15A1-B17G17RGgaCga11AY.620.000436
ORF1ab/nsp15A1-B17G17RGgaAga11AY.730.000665
ORF1ab/nsp15A1-B17G17RGgaAga11AY.75.10.00018
ORF1ab/nsp15A1-B17G17RGgaAga11AY.90.000068
ORF1ab/nsp15A1-B17G17RGgaAga11B0.000128
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.1.280.000311
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.1.3710.010417
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.1.390.00051
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.1.5190.00004
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.1600.000031
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.177.860.000183
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.177.870.000728
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.3200.001245
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.3670.000792
ORF1ab/nsp15A1-B17G17RGgaAga11B.1.3910.001127
ORF1ab/nsp15A1-B17G17RGgaAga11B.40.002208