CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = D39E

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B39D39ED6491EnonsyngaTgaG21110.5238119735-19737
ORF1ab/nsp15A1-B39D39ED6491EnonsyngaTgaA21100.4761919735-19737

Details of the mutation D39E within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B39D39EgaTgaG1121All0.000002
ORF1ab/nsp15A1-B39D39EgaTgaA1021All0.000002
ORF1ab/nsp15A1-B39D39EgaTgaG45B.1.1.70.000004
ORF1ab/nsp15A1-B39D39EgaTgaA15B.1.1.70.000001
ORF1ab/nsp15A1-B39D39EgaTgaA44B.1.2580.000266
ORF1ab/nsp15A1-B39D39EgaTgaA22AY.440.000012
ORF1ab/nsp15A1-B39D39EgaTgaG11AY.40.000002
ORF1ab/nsp15A1-B39D39EgaTgaG11AY.550.000917
ORF1ab/nsp15A1-B39D39EgaTgaG11AY.70.000196
ORF1ab/nsp15A1-B39D39EgaTgaG11AY.9.20.000037
ORF1ab/nsp15A1-B39D39EgaTgaA11B.1.10.000018
ORF1ab/nsp15A1-B39D39EgaTgaA11B.1.1.2140.000055
ORF1ab/nsp15A1-B39D39EgaTgaG11B.1.1570.002985
ORF1ab/nsp15A1-B39D39EgaTgaA11B.1.3110.000275
ORF1ab/nsp15A1-B39D39EgaTgaG11B.1.6090.000479
ORF1ab/nsp15A1-B39D39EgaTgaG11B.1.619.10.000641