CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = D335A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B335D335AD6787AnonsyngAtgCt19160.84210520623-20625
ORF1ab/nsp15A1-B335D335AD6787AnonsyngATgCC1920.10526320623-20625
ORF1ab/nsp15A1-B335D335AD6787AnonsyngATgCG1910.052631620623-20625

Details of the mutation D335A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B335D335AgAtgCt1619All0.000003
ORF1ab/nsp15A1-B335D335AgATgCC219All0
ORF1ab/nsp15A1-B335D335AgATgCG119All0
ORF1ab/nsp15A1-B335D335AgAtgCt44B.1.5260.000094
ORF1ab/nsp15A1-B335D335AgATgCC12AY.430.000004
ORF1ab/nsp15A1-B335D335AgATgCG12AY.430.000004
ORF1ab/nsp15A1-B335D335AgAtgCt22AY.90.000135
ORF1ab/nsp15A1-B335D335AgAtgCt22B.1.1.70.000002
ORF1ab/nsp15A1-B335D335AgAtgCt22B.1.2580.000133
ORF1ab/nsp15A1-B335D335AgAtgCt22B.1.6370.000146
ORF1ab/nsp15A1-B335D335AgATgCC11AY.1130.000142
ORF1ab/nsp15A1-B335D335AgAtgCt11AY.40.000002
ORF1ab/nsp15A1-B335D335AgAtgCt11AY.4.20.000022
ORF1ab/nsp15A1-B335D335AgAtgCt11B.1.1.370.000193
ORF1ab/nsp15A1-B335D335AgAtgCt11B.1.360.000146