CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = D272Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B272D272YD6724YnonsynGacTac3753730.99466720434-20436
ORF1ab/nsp15A1-B272D272YD6724YnonsynGaCTaT37520.0053333320434-20436

Details of the mutation D272Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B272D272YGacTac373375All0.000071
ORF1ab/nsp15A1-B272D272YGaCTaT2375All0
ORF1ab/nsp15A1-B272D272YGacTac109109AY.40.00017
ORF1ab/nsp15A1-B272D272YGacTac2727B.1.10.00049
ORF1ab/nsp15A1-B272D272YGacTac2525B.1.1.70.000022
ORF1ab/nsp15A1-B272D272YGacTac2425B.1.2210.001705
ORF1ab/nsp15A1-B272D272YGaCTaT125B.1.2210.000071
ORF1ab/nsp15A1-B272D272YGacTac2121AY.39.10.000832
ORF1ab/nsp15A1-B272D272YGacTac1818AY.420.000724
ORF1ab/nsp15A1-B272D272YGacTac1414AY.430.000062
ORF1ab/nsp15A1-B272D272YGacTac1313AY.440.000079
ORF1ab/nsp15A1-B272D272YGacTac1313B.1.617.20.000049
ORF1ab/nsp15A1-B272D272YGacTac1111AY.30.000109
ORF1ab/nsp15A1-B272D272YGacTac99B.1.20.000079
ORF1ab/nsp15A1-B272D272YGacTac66B.1.177.120.00091
ORF1ab/nsp15A1-B272D272YGacTac44AY.1020.000106
ORF1ab/nsp15A1-B272D272YGacTac44AY.1190.000141
ORF1ab/nsp15A1-B272D272YGacTac44AY.250.000024
ORF1ab/nsp15A1-B272D272YGacTac44AY.3.10.000341
ORF1ab/nsp15A1-B272D272YGacTac44AY.390.000099
ORF1ab/nsp15A1-B272D272YGacTac44B.1.1600.000125
ORF1ab/nsp15A1-B272D272YGacTac230.111111
ORF1ab/nsp15A1-B272D272YGaCTaT130.055556
ORF1ab/nsp15A1-B272D272YGacTac33AY.4.50.000322
ORF1ab/nsp15A1-B272D272YGacTac33AY.470.000093
ORF1ab/nsp15A1-B272D272YGacTac33AY.540.000286
ORF1ab/nsp15A1-B272D272YGacTac33B.10.000027
ORF1ab/nsp15A1-B272D272YGacTac33B.1.1.2160.002671
ORF1ab/nsp15A1-B272D272YGacTac33D.20.000225
ORF1ab/nsp15A1-B272D272YGacTac33P.10.000047
ORF1ab/nsp15A1-B272D272YGacTac22AY.260.000057
ORF1ab/nsp15A1-B272D272YGacTac22AY.4.20.000043
ORF1ab/nsp15A1-B272D272YGacTac22AY.9.10.000167
ORF1ab/nsp15A1-B272D272YGacTac22AY.930.000546
ORF1ab/nsp15A1-B272D272YGacTac22AY.98.10.000097
ORF1ab/nsp15A1-B272D272YGacTac22B.1.1.10.000653
ORF1ab/nsp15A1-B272D272YGacTac22B.1.1770.000026
ORF1ab/nsp15A1-B272D272YGacTac22B.1.5250.000226
ORF1ab/nsp15A1-B272D272YGacTac11A0.000387
ORF1ab/nsp15A1-B272D272YGacTac11AY.1110.000183
ORF1ab/nsp15A1-B272D272YGacTac11AY.1200.000037
ORF1ab/nsp15A1-B272D272YGacTac11AY.200.000039
ORF1ab/nsp15A1-B272D272YGacTac11AY.230.00007
ORF1ab/nsp15A1-B272D272YGacTac11AY.270.000065
ORF1ab/nsp15A1-B272D272YGacTac11AY.290.000016
ORF1ab/nsp15A1-B272D272YGacTac11AY.360.000148
ORF1ab/nsp15A1-B272D272YGacTac11AY.590.00053
ORF1ab/nsp15A1-B272D272YGacTac11AY.740.000116
ORF1ab/nsp15A1-B272D272YGacTac11AY.750.000056
ORF1ab/nsp15A1-B272D272YGacTac11B.1.1.100.001115
ORF1ab/nsp15A1-B272D272YGacTac11B.1.1.280.000311
ORF1ab/nsp15A1-B272D272YGacTac11B.1.1.5190.00004
ORF1ab/nsp15A1-B272D272YGacTac11B.1.177.690.001484
ORF1ab/nsp15A1-B272D272YGacTac11B.1.177.770.000726
ORF1ab/nsp15A1-B272D272YGacTac11B.1.177.860.000183
ORF1ab/nsp15A1-B272D272YGacTac11B.1.3380.008621
ORF1ab/nsp15A1-B272D272YGacTac11B.1.3510.00003
ORF1ab/nsp15A1-B272D272YGacTac11B.1.4970.000315