CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = A217A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B217A217AA6669AsyngcTgcC135970.71851820269-20271
ORF1ab/nsp15A1-B217A217AA6669AsyngcTgcA135320.23703720269-20271
ORF1ab/nsp15A1-B217A217AA6669AsyngcTgcG13560.044444420269-20271

Details of the mutation A217A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B217A217AgcTgcC97135All0.000019
ORF1ab/nsp15A1-B217A217AgcTgcA32135All0.000006
ORF1ab/nsp15A1-B217A217AgcTgcG6135All0.000001
ORF1ab/nsp15A1-B217A217AgcTgcA2030AY.40.000031
ORF1ab/nsp15A1-B217A217AgcTgcC1030AY.40.000016
ORF1ab/nsp15A1-B217A217AgcTgcC1011B.1.1.70.000009
ORF1ab/nsp15A1-B217A217AgcTgcA111B.1.1.70.000001
ORF1ab/nsp15A1-B217A217AgcTgcC1011B.1.6090.004794
ORF1ab/nsp15A1-B217A217AgcTgcG111B.1.6090.000479
ORF1ab/nsp15A1-B217A217AgcTgcC1111B.1.617.20.000041
ORF1ab/nsp15A1-B217A217AgcTgcC79B.1.10.000127
ORF1ab/nsp15A1-B217A217AgcTgcA29B.1.10.000036
ORF1ab/nsp15A1-B217A217AgcTgcC88B.1.1260.010204
ORF1ab/nsp15A1-B217A217AgcTgcC55AY.1000.00023
ORF1ab/nsp15A1-B217A217AgcTgcC55AY.70.00098
ORF1ab/nsp15A1-B217A217AgcTgcC55B.1.20.000044
ORF1ab/nsp15A1-B217A217AgcTgcC34AY.30.00003
ORF1ab/nsp15A1-B217A217AgcTgcA14AY.30.00001
ORF1ab/nsp15A1-B217A217AgcTgcG33C.370.000348
ORF1ab/nsp15A1-B217A217AgcTgcC23P.10.000032
ORF1ab/nsp15A1-B217A217AgcTgcA13P.10.000016
ORF1ab/nsp15A1-B217A217AgcTgcC12AY.390.000025
ORF1ab/nsp15A1-B217A217AgcTgcA12AY.390.000025
ORF1ab/nsp15A1-B217A217AgcTgcC22B.10.000018
ORF1ab/nsp15A1-B217A217AgcTgcA11AY.1020.000027
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.1030.000006
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.1210.000135
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.230.00007
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.250.000006
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.260.000028
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.360.000148
ORF1ab/nsp15A1-B217A217AgcTgcA11AY.420.00004
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.430.000004
ORF1ab/nsp15A1-B217A217AgcTgcA11AY.440.000006
ORF1ab/nsp15A1-B217A217AgcTgcC11AY.470.000031
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.1.2140.000055
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.1.4850.016667
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp15A1-B217A217AgcTgcA11B.1.1.630.000386
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.160.160.000929
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.36.10.00114
ORF1ab/nsp15A1-B217A217AgcTgcA11B.1.4270.00005
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.4290.000024
ORF1ab/nsp15A1-B217A217AgcTgcG11B.1.4350.011364
ORF1ab/nsp15A1-B217A217AgcTgcA11B.1.4620.007246
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.5260.000024
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.6210.000089
ORF1ab/nsp15A1-B217A217AgcTgcC11B.1.6310.003367
ORF1ab/nsp15A1-B217A217AgcTgcG11B.1.780.008547
ORF1ab/nsp15A1-B217A217AgcTgcC11B.580.010204