CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : Mut = A137A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B137A137AA6589AsyngcCgcT523350940.97343820029-20031
ORF1ab/nsp15A1-B137A137AA6589AsyngcCgcA52331380.026371120029-20031
ORF1ab/nsp15A1-B137A137AA6589AsyngcCgcG523310.00019109520029-20031

Details of the mutation A137A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B137A137AgcCgcT50945233All0.000974
ORF1ab/nsp15A1-B137A137AgcCgcA1385233All0.000026
ORF1ab/nsp15A1-B137A137AgcCgcG15233All0
ORF1ab/nsp15A1-B137A137AgcCgcT31923192AY.530.917769
ORF1ab/nsp15A1-B137A137AgcCgcT731731AY.1030.004539
ORF1ab/nsp15A1-B137A137AgcCgcT343343B.1.1770.004516
ORF1ab/nsp15A1-B137A137AgcCgcT156156B.1.4290.003671
ORF1ab/nsp15A1-B137A137AgcCgcT94100B.1.1.70.000084
ORF1ab/nsp15A1-B137A137AgcCgcA6100B.1.1.70.000005
ORF1ab/nsp15A1-B137A137AgcCgcA8686B.1.1.2570.834951
ORF1ab/nsp15A1-B137A137AgcCgcT8080P.1.100.021558
ORF1ab/nsp15A1-B137A137AgcCgcT5858AY.1110.010623
ORF1ab/nsp15A1-B137A137AgcCgcT5757AY.40.000089
ORF1ab/nsp15A1-B137A137AgcCgcT4250B.1.10.000762
ORF1ab/nsp15A1-B137A137AgcCgcA850B.1.10.000145
ORF1ab/nsp15A1-B137A137AgcCgcT4545B.1.177.350.031099
ORF1ab/nsp15A1-B137A137AgcCgcT1926B.10.000174
ORF1ab/nsp15A1-B137A137AgcCgcA626B.10.000055
ORF1ab/nsp15A1-B137A137AgcCgcG126B.10.000009
ORF1ab/nsp15A1-B137A137AgcCgcT2626B.1.2340.003431
ORF1ab/nsp15A1-B137A137AgcCgcT2424AY.9.10.002009
ORF1ab/nsp15A1-B137A137AgcCgcT1818B.1.177.210.001376
ORF1ab/nsp15A1-B137A137AgcCgcT1616A.10.00451
ORF1ab/nsp15A1-B137A137AgcCgcT1516AY.250.00009
ORF1ab/nsp15A1-B137A137AgcCgcA116AY.250.000006
ORF1ab/nsp15A1-B137A137AgcCgcT1616B.1.1600.000499
ORF1ab/nsp15A1-B137A137AgcCgcT1414B.1.5820.006869
ORF1ab/nsp15A1-B137A137AgcCgcT1113AY.430.000049
ORF1ab/nsp15A1-B137A137AgcCgcA213AY.430.000009
ORF1ab/nsp15A1-B137A137AgcCgcT99AY.440.000055
ORF1ab/nsp15A1-B137A137AgcCgcT99B.1.617.20.000034
ORF1ab/nsp15A1-B137A137AgcCgcT68B.1.20.000053
ORF1ab/nsp15A1-B137A137AgcCgcA28B.1.20.000018
ORF1ab/nsp15A1-B137A137AgcCgcT56AY.420.000201
ORF1ab/nsp15A1-B137A137AgcCgcA16AY.420.00004
ORF1ab/nsp15A1-B137A137AgcCgcA66B.1.5510.007742
ORF1ab/nsp15A1-B137A137AgcCgcT66P.10.000095
ORF1ab/nsp15A1-B137A137AgcCgcA55AY.200.000194
ORF1ab/nsp15A1-B137A137AgcCgcT55AY.4.20.000108
ORF1ab/nsp15A1-B137A137AgcCgcT24AY.4.50.000215
ORF1ab/nsp15A1-B137A137AgcCgcA24AY.4.50.000215
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.1.2140.000222
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.1.330.001684
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.4270.000202
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.5260.000094
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.5890.030303
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.6090.001918
ORF1ab/nsp15A1-B137A137AgcCgcT44B.1.9.50.022727
ORF1ab/nsp15A1-B137A137AgcCgcT33AY.9.20.00011
ORF1ab/nsp15A1-B137A137AgcCgcT33B0.000383
ORF1ab/nsp15A1-B137A137AgcCgcT33B.1.1.2710.166667
ORF1ab/nsp15A1-B137A137AgcCgcA33B.1.1.2770.002276
ORF1ab/nsp15A1-B137A137AgcCgcT33B.1.1.4860.004732
ORF1ab/nsp15A1-B137A137AgcCgcT33B.1.2210.000213
ORF1ab/nsp15A1-B137A137AgcCgcT220.111111
ORF1ab/nsp15A1-B137A137AgcCgcA22AY.1170.000169
ORF1ab/nsp15A1-B137A137AgcCgcT22AY.260.000057
ORF1ab/nsp15A1-B137A137AgcCgcA22AY.290.000032
ORF1ab/nsp15A1-B137A137AgcCgcT22AY.470.000062
ORF1ab/nsp15A1-B137A137AgcCgcT22AY.610.00021
ORF1ab/nsp15A1-B137A137AgcCgcT22AY.750.000112
ORF1ab/nsp15A1-B137A137AgcCgcT22B.1.1.3910.017094
ORF1ab/nsp15A1-B137A137AgcCgcT22B.1.177.460.001837
ORF1ab/nsp15A1-B137A137AgcCgcT22B.1.177.560.001335
ORF1ab/nsp15A1-B137A137AgcCgcT22B.1.2430.000139
ORF1ab/nsp15A1-B137A137AgcCgcT22B.1.3510.000059
ORF1ab/nsp15A1-B137A137AgcCgcT22B.1.36.290.001035
ORF1ab/nsp15A1-B137A137AgcCgcT22C.370.000232
ORF1ab/nsp15A1-B137A137AgcCgcT11A.2.40.003367
ORF1ab/nsp15A1-B137A137AgcCgcA11AY.240.000431
ORF1ab/nsp15A1-B137A137AgcCgcA11AY.30.00001
ORF1ab/nsp15A1-B137A137AgcCgcT11AY.330.000067
ORF1ab/nsp15A1-B137A137AgcCgcT11AY.350.000233
ORF1ab/nsp15A1-B137A137AgcCgcT11AY.39.10.00004
ORF1ab/nsp15A1-B137A137AgcCgcA11AY.50.000021
ORF1ab/nsp15A1-B137A137AgcCgcA11AY.690.000187
ORF1ab/nsp15A1-B137A137AgcCgcT11AY.740.000116
ORF1ab/nsp15A1-B137A137AgcCgcT11AY.960.002075
ORF1ab/nsp15A1-B137A137AgcCgcT11AY.980.000079
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.1.3480.000796
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.1.4130.006897
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.1.5190.00004
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.177.120.000152
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.177.150.000631
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.177.310.011494
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.177.40.000211
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.177.70.000165
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.2400.000216
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.2410.000812
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.2600.003344
ORF1ab/nsp15A1-B137A137AgcCgcA11B.1.36.360.000602
ORF1ab/nsp15A1-B137A137AgcCgcA11B.1.3780.006849
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.4040.001302
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.5330.009615
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.5950.000261
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.5960.000087
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.6210.000089
ORF1ab/nsp15A1-B137A137AgcCgcT11B.1.80.001972
ORF1ab/nsp15A1-B137A137AgcCgcT11B.40.002208
ORF1ab/nsp15A1-B137A137AgcCgcT11B.6.60.000889
ORF1ab/nsp15A1-B137A137AgcCgcT11P.1.90.004808
ORF1ab/nsp15A1-B137A137AgcCgcT11Q.30.000145