CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 84

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B84V84VV6536VsyngtGgtT10956104650.95518419870-19872
ORF1ab/nsp15A1-B84V84VV6536VsyngtGgtA109563890.035505719870-19872
ORF1ab/nsp15A1-B84V84VV6536VsyngtGgtC109561020.0093099719870-19872
ORF1ab/nsp15A1-B84V84LV6536LnonsynGtgTtg1411290.91489419870-19872
ORF1ab/nsp15A1-B84V84LV6536LnonsynGtgCtg141120.085106419870-19872
ORF1ab/nsp15A1-B84V84MV6536MnonsynGtgAtg8181119870-19872
ORF1ab/nsp15A1-B84V84AV6536AnonsyngTggCg22210.95454519870-19872
ORF1ab/nsp15A1-B84V84AV6536AnonsyngTGgCT2210.045454519870-19872
ORF1ab/nsp15A1-B84V84delV6536deldelGTG---1515119870-19872
ORF1ab/nsp15A1-B84V84del1V6536del1delGtg-tg630.519870-19872
ORF1ab/nsp15A1-B84V84del1V6536del1delgtGgt-620.33333319870-19872
ORF1ab/nsp15A1-B84V84del1V6536del1delgTGgC-610.16666719870-19872
ORF1ab/nsp15A1-B84V84GV6536GnonsyngTggGg22119870-19872
ORF1ab/nsp15A1-B84V84EV6536EnonsyngTggAg22119870-19872
ORF1ab/nsp15A1-B84V84KV6536KnonsynGTGAAA11119870-19872
ORF1ab/nsp15A1-B84V84QV6536QnonsynGTgCAg11119870-19872

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B84V84VgtGgtT1046510956All0.002002
ORF1ab/nsp15A1-B84V84VgtGgtA38910956All0.000074
ORF1ab/nsp15A1-B84V84VgtGgtC10210956All0.00002
ORF1ab/nsp15A1-B84V84VgtGgtT22512251AY.98.10.109018
ORF1ab/nsp15A1-B84V84VgtGgtT10901090B.1.5880.991811
ORF1ab/nsp15A1-B84V84VgtGgtT8321006B.1.1.70.000745
ORF1ab/nsp15A1-B84V84VgtGgtA1711006B.1.1.70.000153
ORF1ab/nsp15A1-B84V84VgtGgtC31006B.1.1.70.000003
ORF1ab/nsp15A1-B84V84VgtGgtT827844AY.40.001287
ORF1ab/nsp15A1-B84V84VgtGgtC12844AY.40.000019
ORF1ab/nsp15A1-B84V84VgtGgtA5844AY.40.000008
ORF1ab/nsp15A1-B84V84VgtGgtT469528B.1.20.00413
ORF1ab/nsp15A1-B84V84VgtGgtA58528B.1.20.000511
ORF1ab/nsp15A1-B84V84VgtGgtC1528B.1.20.000009
ORF1ab/nsp15A1-B84V84VgtGgtT522522B.1.5870.990512
ORF1ab/nsp15A1-B84V84VgtGgtT397407B.10.003636
ORF1ab/nsp15A1-B84V84VgtGgtA7407B.10.000064
ORF1ab/nsp15A1-B84V84VgtGgtC3407B.10.000027
ORF1ab/nsp15A1-B84V84VgtGgtT361361B.1.5170.154142
ORF1ab/nsp15A1-B84V84VgtGgtT268275B.1.617.20.001009
ORF1ab/nsp15A1-B84V84VgtGgtA5275B.1.617.20.000019
ORF1ab/nsp15A1-B84V84VgtGgtC2275B.1.617.20.000008
ORF1ab/nsp15A1-B84V84VgtGgtT259259AY.39.10.01026
ORF1ab/nsp15A1-B84V84VgtGgtT220222AY.430.000975
ORF1ab/nsp15A1-B84V84VgtGgtC1222AY.430.000004
ORF1ab/nsp15A1-B84V84VgtGgtA1222AY.430.000004
ORF1ab/nsp15A1-B84V84VgtGgtT199199P.20.037141
ORF1ab/nsp15A1-B84V84VgtGgtT163163AY.1030.001012
ORF1ab/nsp15A1-B84V84VgtGgtT142142B.1.177.120.021541
ORF1ab/nsp15A1-B84V84LGtgTtg129141All0.000025
ORF1ab/nsp15A1-B84V84LGtgCtg12141All0.000002
ORF1ab/nsp15A1-B84V84VgtGgtT118118AY.330.00788
ORF1ab/nsp15A1-B84V84VgtGgtT104112AY.440.000633
ORF1ab/nsp15A1-B84V84VgtGgtA7112AY.440.000043
ORF1ab/nsp15A1-B84V84VgtGgtC1112AY.440.000006
ORF1ab/nsp15A1-B84V84VgtGgtT74112B.1.1.5190.002939
ORF1ab/nsp15A1-B84V84VgtGgtA38112B.1.1.5190.001509
ORF1ab/nsp15A1-B84V84VgtGgtT104112P.10.001638
ORF1ab/nsp15A1-B84V84VgtGgtA6112P.10.000095
ORF1ab/nsp15A1-B84V84VgtGgtC2112P.10.000032
ORF1ab/nsp15A1-B84V84VgtGgtT96100B.1.10.001742
ORF1ab/nsp15A1-B84V84VgtGgtC4100B.1.10.000073
ORF1ab/nsp15A1-B84V84VgtGgtT8383B.1.351.20.025113
ORF1ab/nsp15A1-B84V84VgtGgtT8383P.1.150.019284
ORF1ab/nsp15A1-B84V84MGtgAtg8181All0.000015
ORF1ab/nsp15A1-B84V84VgtGgtT6872B.1.3110.018671
ORF1ab/nsp15A1-B84V84VgtGgtA272B.1.3110.000549
ORF1ab/nsp15A1-B84V84VgtGgtC272B.1.3110.000549
ORF1ab/nsp15A1-B84V84VgtGgtT6868B.1.1.2840.007303
ORF1ab/nsp15A1-B84V84VgtGgtT5963AY.250.000355
ORF1ab/nsp15A1-B84V84VgtGgtA463AY.250.000024
ORF1ab/nsp15A1-B84V84VgtGgtT6161B.1.5950.015919
ORF1ab/nsp15A1-B84V84VgtGgtT6061P.1.140.002868
ORF1ab/nsp15A1-B84V84VgtGgtC161P.1.140.000048
ORF1ab/nsp15A1-B84V84VgtGgtT5253AY.390.001285
ORF1ab/nsp15A1-B84V84VgtGgtA153AY.390.000025
ORF1ab/nsp15A1-B84V84VgtGgtT4852AY.1020.001273
ORF1ab/nsp15A1-B84V84VgtGgtC252AY.1020.000053
ORF1ab/nsp15A1-B84V84VgtGgtA252AY.1020.000053
ORF1ab/nsp15A1-B84V84VgtGgtT5152AY.30.000507
ORF1ab/nsp15A1-B84V84VgtGgtA152AY.30.00001
ORF1ab/nsp15A1-B84V84VgtGgtT5050B.1.177.620.059595
ORF1ab/nsp15A1-B84V84VgtGgtT4849AY.420.001931
ORF1ab/nsp15A1-B84V84VgtGgtC149AY.420.00004
ORF1ab/nsp15A1-B84V84VgtGgtT4848AY.1000.002208
ORF1ab/nsp15A1-B84V84VgtGgtT2944B.1.1770.000382
ORF1ab/nsp15A1-B84V84VgtGgtA1444B.1.1770.000184
ORF1ab/nsp15A1-B84V84VgtGgtC144B.1.1770.000013
ORF1ab/nsp15A1-B84V84VgtGgtT4242B.1.5260.000987
ORF1ab/nsp15A1-B84V84VgtGgtT3440B.1.1600.00106
ORF1ab/nsp15A1-B84V84VgtGgtC640B.1.1600.000187
ORF1ab/nsp15A1-B84V84VgtGgtT4040B.1.5640.017036
ORF1ab/nsp15A1-B84V84VgtGgtT2037B.1.2210.001421
ORF1ab/nsp15A1-B84V84VgtGgtA1737B.1.2210.001208
ORF1ab/nsp15A1-B84V84VgtGgtC3434AY.530.009776
ORF1ab/nsp15A1-B84V84LGtgTtg3131AY.390.000766
ORF1ab/nsp15A1-B84V84VgtGgtT3131B.1.4680.177143
ORF1ab/nsp15A1-B84V84VgtGgtT3030AY.70.00588
ORF1ab/nsp15A1-B84V84VgtGgtT2929B.1.2400.006251
ORF1ab/nsp15A1-B84V84VgtGgtT2626B.1.588.11
ORF1ab/nsp15A1-B84V84VgtGgtT2424AY.1190.000847
ORF1ab/nsp15A1-B84V84AgTggCg2122All0.000004
ORF1ab/nsp15A1-B84V84AgTGgCT122All0
ORF1ab/nsp15A1-B84V84VgtGgtT2121AY.9.20.000771
ORF1ab/nsp15A1-B84V84VgtGgtT2121B.1.1.2140.001165
ORF1ab/nsp15A1-B84V84VgtGgtT1821B.1.4290.000424
ORF1ab/nsp15A1-B84V84VgtGgtA221B.1.4290.000047
ORF1ab/nsp15A1-B84V84VgtGgtC121B.1.4290.000024
ORF1ab/nsp15A1-B84V84VgtGgtT2121Q.10.002653
ORF1ab/nsp15A1-B84V84VgtGgtA2020B.1.36.180.008403
ORF1ab/nsp15A1-B84V84VgtGgtT1719AY.200.000661
ORF1ab/nsp15A1-B84V84VgtGgtA119AY.200.000039
ORF1ab/nsp15A1-B84V84VgtGgtC119AY.200.000039
ORF1ab/nsp15A1-B84V84VgtGgtT1819AY.90.001217
ORF1ab/nsp15A1-B84V84VgtGgtC119AY.90.000068
ORF1ab/nsp15A1-B84V84VgtGgtT1718B.1.1.330.007155
ORF1ab/nsp15A1-B84V84VgtGgtC118B.1.1.330.000421
ORF1ab/nsp15A1-B84V84VgtGgtT1818B.1.360.002626
ORF1ab/nsp15A1-B84V84VgtGgtT1517AY.230.001046
ORF1ab/nsp15A1-B84V84VgtGgtA217AY.230.000139
ORF1ab/nsp15A1-B84V84VgtGgtT1717B.1.1.370.003279
ORF1ab/nsp15A1-B84V84VgtGgtT1717B.1.1110.019976
ORF1ab/nsp15A1-B84V84VgtGgtT1617B.1.3510.000476
ORF1ab/nsp15A1-B84V84VgtGgtA117B.1.3510.00003
ORF1ab/nsp15A1-B84V84delGTG---1515All0.000003
ORF1ab/nsp15A1-B84V84VgtGgtT1515AY.470.000467
ORF1ab/nsp15A1-B84V84VgtGgtT1014AY.1200.000372
ORF1ab/nsp15A1-B84V84VgtGgtA314AY.1200.000112
ORF1ab/nsp15A1-B84V84VgtGgtC114AY.1200.000037
ORF1ab/nsp15A1-B84V84VgtGgtT1414AY.340.001358
ORF1ab/nsp15A1-B84V84VgtGgtT1314AY.60.000535
ORF1ab/nsp15A1-B84V84VgtGgtA114AY.60.000041
ORF1ab/nsp15A1-B84V84MGtgAtg1313AY.40.00002
ORF1ab/nsp15A1-B84V84VgtGgtT1012AY.290.000158
ORF1ab/nsp15A1-B84V84VgtGgtA212AY.290.000032
ORF1ab/nsp15A1-B84V84VgtGgtT1212B.1.4270.000606
ORF1ab/nsp15A1-B84V84VgtGgtT1212B.1.5960.001046
ORF1ab/nsp15A1-B84V84VgtGgtT1011AY.1090.007396
ORF1ab/nsp15A1-B84V84VgtGgtC111AY.1090.00074
ORF1ab/nsp15A1-B84V84LGtgTtg1011AY.40.000016
ORF1ab/nsp15A1-B84V84LGtgCtg111AY.40.000002
ORF1ab/nsp15A1-B84V84VgtGgtT1111AY.410.003233
ORF1ab/nsp15A1-B84V84LGtgTtg1010AY.200.000389
ORF1ab/nsp15A1-B84V84VgtGgtT1010AY.270.000647
ORF1ab/nsp15A1-B84V84AgTggCg1010AY.290.000158
ORF1ab/nsp15A1-B84V84LGtgCtg1010AY.420.000402
ORF1ab/nsp15A1-B84V84VgtGgtT710AY.50.000145
ORF1ab/nsp15A1-B84V84VgtGgtC310AY.50.000062
ORF1ab/nsp15A1-B84V84VgtGgtT1010B.1.1.580.053763
ORF1ab/nsp15A1-B84V84VgtGgtT1010B.1.177.210.000765
ORF1ab/nsp15A1-B84V84LGtgTtg1010B.1.617.20.000038
ORF1ab/nsp15A1-B84V84VgtGgtT99AY.1140.00208
ORF1ab/nsp15A1-B84V84VgtGgtT99AY.360.001334
ORF1ab/nsp15A1-B84V84MGtgAtg99AY.60.00037
ORF1ab/nsp15A1-B84V84VgtGgtT99B.1.1280.005718
ORF1ab/nsp15A1-B84V84VgtGgtT99B.1.177.350.00622
ORF1ab/nsp15A1-B84V84LGtgTtg99B.1.20.000079
ORF1ab/nsp15A1-B84V84VgtGgtT99B.1.4090.007031
ORF1ab/nsp15A1-B84V84VgtGgtT89B.1.617.10.001032
ORF1ab/nsp15A1-B84V84VgtGgtA19B.1.617.10.000129
ORF1ab/nsp15A1-B84V84VgtGgtT79P.1.170.001132
ORF1ab/nsp15A1-B84V84VgtGgtA19P.1.170.000162
ORF1ab/nsp15A1-B84V84VgtGgtC19P.1.170.000162
ORF1ab/nsp15A1-B84V84VgtGgtT88A.10.002255
ORF1ab/nsp15A1-B84V84VgtGgtT88AY.750.000448
ORF1ab/nsp15A1-B84V84VgtGgtT88B.1.1.2860.023188
ORF1ab/nsp15A1-B84V84VgtGgtT88B.1.4000.003432
ORF1ab/nsp15A1-B84V84VgtGgtT88B.1.5250.000905
ORF1ab/nsp15A1-B84V84VgtGgtT88B.1.5670.026667
ORF1ab/nsp15A1-B84V84VgtGgtT77AY.1210.000947
ORF1ab/nsp15A1-B84V84VgtGgtT77AY.380.003495
ORF1ab/nsp15A1-B84V84VgtGgtT77AY.610.000733
ORF1ab/nsp15A1-B84V84AgTggCg77AY.98.10.000339
ORF1ab/nsp15A1-B84V84VgtGgtT77B.1.1.3050.027027
ORF1ab/nsp15A1-B84V84VgtGgtT77B.1.2430.000487
ORF1ab/nsp15A1-B84V84VgtGgtT67B.1.2580.000399
ORF1ab/nsp15A1-B84V84VgtGgtA17B.1.2580.000067
ORF1ab/nsp15A1-B84V84del1Gtg-tg36All0.000001
ORF1ab/nsp15A1-B84V84del1gtGgt-26All0
ORF1ab/nsp15A1-B84V84del1gTGgC-16All0
ORF1ab/nsp15A1-B84V84VgtGgtT66AY.130.000966
ORF1ab/nsp15A1-B84V84VgtGgtT36AY.260.000085
ORF1ab/nsp15A1-B84V84VgtGgtA26AY.260.000057
ORF1ab/nsp15A1-B84V84VgtGgtC16AY.260.000028
ORF1ab/nsp15A1-B84V84VgtGgtT66AY.350.001398
ORF1ab/nsp15A1-B84V84VgtGgtT56AY.4.20.000108
ORF1ab/nsp15A1-B84V84VgtGgtC16AY.4.20.000022
ORF1ab/nsp15A1-B84V84LGtgTtg66AY.4.40.002455
ORF1ab/nsp15A1-B84V84VgtGgtT66AY.75.10.001082
ORF1ab/nsp15A1-B84V84VgtGgtT66AY.980.000474
ORF1ab/nsp15A1-B84V84VgtGgtT66AY.99.20.000553
ORF1ab/nsp15A1-B84V84VgtGgtT66B.1.36.290.003104
ORF1ab/nsp15A1-B84V84VgtGgtT66B.1.3690.001711
ORF1ab/nsp15A1-B84V84VgtGgtT66B.1.4390.035503
ORF1ab/nsp15A1-B84V84VgtGgtT66B.1.6090.002876
ORF1ab/nsp15A1-B84V84VgtGgtT36B.1.6210.000266
ORF1ab/nsp15A1-B84V84VgtGgtC26B.1.6210.000177
ORF1ab/nsp15A1-B84V84VgtGgtA16B.1.6210.000089
ORF1ab/nsp15A1-B84V84LGtgTtg55AY.1020.000133
ORF1ab/nsp15A1-B84V84MGtgAtg55AY.1030.000031
ORF1ab/nsp15A1-B84V84MGtgAtg55AY.390.000124
ORF1ab/nsp15A1-B84V84VgtGgtT55AY.450.000608
ORF1ab/nsp15A1-B84V84VgtGgtT55AY.460.00052
ORF1ab/nsp15A1-B84V84VgtGgtT55AY.46.40.000823
ORF1ab/nsp15A1-B84V84VgtGgtT55AY.46.60.000361
ORF1ab/nsp15A1-B84V84VgtGgtT55AY.590.002648
ORF1ab/nsp15A1-B84V84VgtGgtT55AY.840.002187
ORF1ab/nsp15A1-B84V84LGtgTtg55AY.98.10.000242
ORF1ab/nsp15A1-B84V84VgtGgtT55B.1.160.70.010395
ORF1ab/nsp15A1-B84V84MGtgAtg55B.1.177.600.001092
ORF1ab/nsp15A1-B84V84VgtGgtT55B.1.2790.002568
ORF1ab/nsp15A1-B84V84VgtGgtT55B.1.36.80.005
ORF1ab/nsp15A1-B84V84VgtGgtT55B.1.4280.005102
ORF1ab/nsp15A1-B84V84LGtgTtg44AY.1170.000338
ORF1ab/nsp15A1-B84V84VgtGgtT44AY.1170.000338
ORF1ab/nsp15A1-B84V84MGtgAtg44AY.250.000024
ORF1ab/nsp15A1-B84V84MGtgAtg44AY.290.000063
ORF1ab/nsp15A1-B84V84MGtgAtg44AY.5.40.001107
ORF1ab/nsp15A1-B84V84VgtGgtT44AY.99.10.006211
ORF1ab/nsp15A1-B84V84VgtGgtT44B0.000511
ORF1ab/nsp15A1-B84V84VgtGgtT44B.1.1.2220.000816
ORF1ab/nsp15A1-B84V84VgtGgtT44B.1.1.3060.001754
ORF1ab/nsp15A1-B84V84VgtGgtT44B.1.1.4860.006309
ORF1ab/nsp15A1-B84V84VgtGgtT44B.1.1.500.002716
ORF1ab/nsp15A1-B84V84LGtgTtg44B.1.1.70.000004
ORF1ab/nsp15A1-B84V84VgtGgtC34B.1.177.540.001819
ORF1ab/nsp15A1-B84V84VgtGgtT14B.1.177.540.000606
ORF1ab/nsp15A1-B84V84VgtGgtT44B.1.258.30.0067
ORF1ab/nsp15A1-B84V84LGtgTtg44B.1.3990.007737
ORF1ab/nsp15A1-B84V84VgtGgtT44B.4.80.285714
ORF1ab/nsp15A1-B84V84VgtGgtT34C.370.000348
ORF1ab/nsp15A1-B84V84VgtGgtA14C.370.000116
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.10.001187
ORF1ab/nsp15A1-B84V84MGtgAtg33AY.1020.00008
ORF1ab/nsp15A1-B84V84LGtgTtg33AY.1030.000019
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.1060.001005
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.1070.001398
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.4.50.000322
ORF1ab/nsp15A1-B84V84MGtgAtg33AY.440.000018
ORF1ab/nsp15A1-B84V84LGtgTtg33AY.46.60.000217
ORF1ab/nsp15A1-B84V84VgtGgtT23AY.480.00093
ORF1ab/nsp15A1-B84V84VgtGgtC13AY.480.000465
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.740.000347
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.9.10.000251
ORF1ab/nsp15A1-B84V84VgtGgtT33AY.920.000862
ORF1ab/nsp15A1-B84V84VgtGgtC23B.1.1.280.000622
ORF1ab/nsp15A1-B84V84VgtGgtT13B.1.1.280.000311
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.1.3290.011538
ORF1ab/nsp15A1-B84V84MGtgAtg33B.1.1.70.000003
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.110.30.002155
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.177.40.000633
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.177.90.003995
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.36.350.007812
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.5600.013889
ORF1ab/nsp15A1-B84V84MGtgAtg33B.1.617.20.000011
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.6270.006061
ORF1ab/nsp15A1-B84V84VgtGgtT33B.1.6370.000219
ORF1ab/nsp15A1-B84V84VgtGgtT33B.290.010526
ORF1ab/nsp15A1-B84V84VgtGgtT33C.36.30.001702
ORF1ab/nsp15A1-B84V84VgtGgtT33P.1.120.001452
ORF1ab/nsp15A1-B84V84VgtGgtT33P.1.70.000958
ORF1ab/nsp15A1-B84V84delGTG---220.111111
ORF1ab/nsp15A1-B84V84VgtGgtT22A.210.00554
ORF1ab/nsp15A1-B84V84EgTggAg22All0
ORF1ab/nsp15A1-B84V84GgTggGg22All0
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.100.00106
ORF1ab/nsp15A1-B84V84VgtGgtC12AY.1130.000142
ORF1ab/nsp15A1-B84V84VgtGgtT12AY.1130.000142
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.1150.010417
ORF1ab/nsp15A1-B84V84MGtgAtg22AY.1200.000074
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.160.000759
ORF1ab/nsp15A1-B84V84LGtgTtg12AY.30.00001
ORF1ab/nsp15A1-B84V84LGtgCtg12AY.30.00001
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.320.001065
ORF1ab/nsp15A1-B84V84delGTG---22AY.430.000009
ORF1ab/nsp15A1-B84V84MGtgAtg22AY.430.000009
ORF1ab/nsp15A1-B84V84LGtgTtg22AY.430.000009
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.46.20.001271
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.510.001818
ORF1ab/nsp15A1-B84V84VgtGgtT12AY.690.000187
ORF1ab/nsp15A1-B84V84VgtGgtA12AY.690.000187
ORF1ab/nsp15A1-B84V84VgtGgtT12AY.700.000209
ORF1ab/nsp15A1-B84V84VgtGgtC12AY.700.000209
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.780.003082
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.820.002714
ORF1ab/nsp15A1-B84V84VgtGgtT22AY.910.001461
ORF1ab/nsp15A1-B84V84LGtgTtg22B.10.000018
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.2160.001781
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.2690.002706
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.3120.003824
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.3510.005587
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.4130.013793
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.4340.000697
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.470.010695
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.1.630.000772
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.160.280.005848
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.177.150.001262
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.177.420.001789
ORF1ab/nsp15A1-B84V84VgtGgtA22B.1.177.510.009132
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.2050.047619
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.2340.000264
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.3400.008584
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.36.10.002281
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.36.100.009569
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.36.380.003284
ORF1ab/nsp15A1-B84V84LGtgTtg22B.1.362.20.009434
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.3670.001585
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.438.10.000215
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.4480.005249
ORF1ab/nsp15A1-B84V84VgtGgtC12B.1.466.20.000391
ORF1ab/nsp15A1-B84V84VgtGgtT12B.1.466.20.000391
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.4910.105263
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.5090.001732
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.5510.002581
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.5990.007299
ORF1ab/nsp15A1-B84V84AgTggCg22B.1.617.20.000008
ORF1ab/nsp15A1-B84V84VgtGgtT22B.1.6180.008065
ORF1ab/nsp15A1-B84V84VgtGgtT22B.4.10.037736
ORF1ab/nsp15A1-B84V84VgtGgtC12D.20.000075
ORF1ab/nsp15A1-B84V84VgtGgtT12D.20.000075
ORF1ab/nsp15A1-B84V84MGtgAtg22N.50.003534
ORF1ab/nsp15A1-B84V84VgtGgtA22P.1.160.000748
ORF1ab/nsp15A1-B84V84VgtGgtT11A.110.058824
ORF1ab/nsp15A1-B84V84VgtGgtT11A.2.50.000499
ORF1ab/nsp15A1-B84V84VgtGgtT11A.23.10.000704
ORF1ab/nsp15A1-B84V84QGTgCAg11All0
ORF1ab/nsp15A1-B84V84KGTGAAA11All0
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.1010.00049
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.1050.000643
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.110.001339
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.1110.000183
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.1160.000287
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.1160.000287
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.116.10.000311
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.1180.000063
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.1180.000063
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.1180.000063
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.1190.000035
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.120.000316
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.140.000088
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.220.002092
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.230.00007
ORF1ab/nsp15A1-B84V84VgtGgtA11AY.240.000431
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.250.000006
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.290.000016
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.3.10.000085
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.300.000396
ORF1ab/nsp15A1-B84V84GgTggGg11AY.40.000002
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.4.20.000022
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.4.2.10.000149
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.4.30.000842
ORF1ab/nsp15A1-B84V84GgTggGg11AY.430.000004
ORF1ab/nsp15A1-B84V84del1Gtg-tg11AY.440.000006
ORF1ab/nsp15A1-B84V84delGTG---11AY.440.000006
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.440.000006
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.5.30.000337
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.500.000799
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.520.000814
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.540.000095
ORF1ab/nsp15A1-B84V84KGTGAAA11AY.590.00053
ORF1ab/nsp15A1-B84V84LGtgTtg11AY.610.000105
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.620.000436
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.620.000436
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.640.000595
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.650.000533
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.660.00107
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.680.000274
ORF1ab/nsp15A1-B84V84EgTggAg11AY.690.000187
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.710.000475
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.750.000056
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.790.001211
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.850.000427
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.890.004902
ORF1ab/nsp15A1-B84V84VgtGgtT11AY.940.000443
ORF1ab/nsp15A1-B84V84MGtgAtg11AY.980.000079
ORF1ab/nsp15A1-B84V84LGtgTtg11B0.000128
ORF1ab/nsp15A1-B84V84MGtgAtg11B.10.000009
ORF1ab/nsp15A1-B84V84delGTG---11B.10.000009
ORF1ab/nsp15A1-B84V84AgTGgCT11B.10.000009
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.10.000018
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.1410.002012
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.1440.028571
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.1600.02381
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.1920.002309
ORF1ab/nsp15A1-B84V84VgtGgtC11B.1.1.2050.003717
ORF1ab/nsp15A1-B84V84VgtGgtA11B.1.1.2100.005714
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.2250.007194
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.2280.003049
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.2410.00207
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.1.2440.015385
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.2610.008621
ORF1ab/nsp15A1-B84V84MGtgAtg11B.1.1.2630.001558
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.270.00565
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.1.280.000311
ORF1ab/nsp15A1-B84V84VgtGgtA11B.1.1.3010.001179
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.3020.002075
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.3260.001761
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.1.3260.001761
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.390.00051
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.4020.011111
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.4140.142857
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.4640.001473
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1.480.002874
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.1.4850.016667
ORF1ab/nsp15A1-B84V84delGTG---11B.1.1.70.000001
ORF1ab/nsp15A1-B84V84delGTG---11B.1.1.700.000341
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.1460.004237
ORF1ab/nsp15A1-B84V84AgTggCg11B.1.1770.000013
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.177.240.001295
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.177.500.004695
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.177.560.000668
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.177.570.000281
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.177.620.001192
ORF1ab/nsp15A1-B84V84MGtgAtg11B.1.177.780.009709
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.177.790.002342
ORF1ab/nsp15A1-B84V84del1gTGgC-11B.1.1790.003759
ORF1ab/nsp15A1-B84V84EgTggAg11B.1.20.000009
ORF1ab/nsp15A1-B84V84del1Gtg-tg11B.1.20.000009
ORF1ab/nsp15A1-B84V84delGTG---11B.1.20.000009
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.2180.005155
ORF1ab/nsp15A1-B84V84MGtgAtg11B.1.2210.000071
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.221.20.004016
ORF1ab/nsp15A1-B84V84delGTG---11B.1.2580.000067
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.258.170.000104
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.2670.018519
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.3140.007519
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.3490.000715
ORF1ab/nsp15A1-B84V84delGTG---11B.1.3510.00003
ORF1ab/nsp15A1-B84V84VgtGgtA11B.1.3560.001727
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.36.170.000494
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.36.220.001208
ORF1ab/nsp15A1-B84V84del1gtGgt-11B.1.36.290.000517
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.36.310.001751
ORF1ab/nsp15A1-B84V84MGtgAtg11B.1.3690.000285
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.3750.00082
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.3870.04
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.3930.028571
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.400.10.015152
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.4260.001009
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.4270.00005
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.4330.003195
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.4600.017857
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.4620.007246
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.4700.001404
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.5230.002451
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.5250.000113
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.5760.000907
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.5780.017857
ORF1ab/nsp15A1-B84V84del1Gtg-tg11B.1.5820.000491
ORF1ab/nsp15A1-B84V84LGtgTtg11B.1.5960.000087
ORF1ab/nsp15A1-B84V84delGTG---11B.1.5960.000087
ORF1ab/nsp15A1-B84V84MGtgAtg11B.1.617.10.000129
ORF1ab/nsp15A1-B84V84del1gtGgt-11B.1.617.20.000004
ORF1ab/nsp15A1-B84V84QGTgCAg11B.1.617.20.000004
ORF1ab/nsp15A1-B84V84VgtGgtA11B.1.6200.000946
ORF1ab/nsp15A1-B84V84AgTggCg11B.1.6210.000089
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.621.10.000506
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.6290.013333
ORF1ab/nsp15A1-B84V84delGTG---11B.1.6300.005236
ORF1ab/nsp15A1-B84V84VgtGgtT11B.1.6320.006711
ORF1ab/nsp15A1-B84V84VgtGgtT11B.400.000364
ORF1ab/nsp15A1-B84V84VgtGgtT11C.10.002392
ORF1ab/nsp15A1-B84V84VgtGgtA11C.140.004329
ORF1ab/nsp15A1-B84V84VgtGgtT11C.360.000911
ORF1ab/nsp15A1-B84V84VgtGgtT11C.36.3.10.002717
ORF1ab/nsp15A1-B84V84VgtGgtT11N.50.001767
ORF1ab/nsp15A1-B84V84delGTG---11P.10.000016
ORF1ab/nsp15A1-B84V84VgtGgtT11P.1.10.000318
ORF1ab/nsp15A1-B84V84VgtGgtT11P.1.100.000269
ORF1ab/nsp15A1-B84V84delGTG---11P.1.150.000232
ORF1ab/nsp15A1-B84V84VgtGgtT11P.60.003145
ORF1ab/nsp15A1-B84V84VgtGgtC11Q.40.000455
ORF1ab/nsp15A1-B84V84VgtGgtT11Q.80.000165
ORF1ab/nsp15A1-B84V84VgtGgtT11R.10.00009