CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 81

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B81A81VA6533VnonsyngCtgTt11793117890.99966119861-19863
ORF1ab/nsp15A1-B81A81VA6533VnonsyngCTgTC1179340.00033918419861-19863
ORF1ab/nsp15A1-B81A81TA6533TnonsynGctAct2722710.99632419861-19863
ORF1ab/nsp15A1-B81A81TA6533TnonsynGcTAcC27210.0036764719861-19863
ORF1ab/nsp15A1-B81A81SA6533SnonsynGctTct194194119861-19863
ORF1ab/nsp15A1-B81A81AA6533AsyngcTgcC1281210.94531219861-19863
ORF1ab/nsp15A1-B81A81AA6533AsyngcTgcA12870.054687519861-19863
ORF1ab/nsp15A1-B81A81DA6533DnonsyngCtgAt2929119861-19863
ORF1ab/nsp15A1-B81A81delA6533deldelGCT---1414119861-19863
ORF1ab/nsp15A1-B81A81PA6533PnonsynGctCct55119861-19863
ORF1ab/nsp15A1-B81A81del1A6533del1delgCtg-t420.519861-19863
ORF1ab/nsp15A1-B81A81del1A6533del1delGcTAc-420.519861-19863
ORF1ab/nsp15A1-B81A81GA6533GnonsyngCtgGt33119861-19863
ORF1ab/nsp15A1-B81A81FA6533FnonsynGCtTTt320.66666719861-19863
ORF1ab/nsp15A1-B81A81FA6533FnonsynGCTTTC310.33333319861-19863
ORF1ab/nsp15A1-B81A81del2A6533del2delGCt--t210.519861-19863
ORF1ab/nsp15A1-B81A81del2A6533del2delgCTg--210.519861-19863

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B81A81VgCtgTt1178911793All0.002255
ORF1ab/nsp15A1-B81A81VgCTgTC411793All0.000001
ORF1ab/nsp15A1-B81A81VgCtgTt34183418B.1.1.70.00306
ORF1ab/nsp15A1-B81A81VgCtgTt14841484B.1.1.370.28621
ORF1ab/nsp15A1-B81A81VgCtgTt783783AY.40.001219
ORF1ab/nsp15A1-B81A81VgCtgTt769769AY.430.003407
ORF1ab/nsp15A1-B81A81VgCtgTt378378B.1.617.20.001423
ORF1ab/nsp15A1-B81A81VgCtgTt274274AY.1190.009674
ORF1ab/nsp15A1-B81A81TGctAct271272All0.000052
ORF1ab/nsp15A1-B81A81TGcTAcC1272All0
ORF1ab/nsp15A1-B81A81VgCtgTt263263B.1.4270.013281
ORF1ab/nsp15A1-B81A81VgCtgTt259259B.1.20.002281
ORF1ab/nsp15A1-B81A81VgCtgTt216216P.1.60.420233
ORF1ab/nsp15A1-B81A81SGctTct194194All0.000037
ORF1ab/nsp15A1-B81A81VgCtgTt188188AY.9.20.006905
ORF1ab/nsp15A1-B81A81VgCtgTt167167AY.750.009356
ORF1ab/nsp15A1-B81A81VgCtgTt164164AY.4.20.003557
ORF1ab/nsp15A1-B81A81VgCtgTt145145AY.1030.0009
ORF1ab/nsp15A1-B81A81VgCtgTt130130AY.1020.003447
ORF1ab/nsp15A1-B81A81AgcTgcC121128All0.000023
ORF1ab/nsp15A1-B81A81AgcTgcA7128All0.000001
ORF1ab/nsp15A1-B81A81VgCtgTt120120AY.260.003397
ORF1ab/nsp15A1-B81A81VgCtgTt116116AY.330.007746
ORF1ab/nsp15A1-B81A81TGctAct116116AY.40.000181
ORF1ab/nsp15A1-B81A81VgCtgTt116116C.380.935484
ORF1ab/nsp15A1-B81A81VgCtgTt107107B.1.1.700.036494
ORF1ab/nsp15A1-B81A81VgCtgTt101101AY.250.000607
ORF1ab/nsp15A1-B81A81VgCtgTt8989B.10.000815
ORF1ab/nsp15A1-B81A81VgCtgTt8787P.10.001371
ORF1ab/nsp15A1-B81A81VgCtgTt8484B.1.258.140.082353
ORF1ab/nsp15A1-B81A81VgCtgTt7983AY.30.000786
ORF1ab/nsp15A1-B81A81VgCTgTC483AY.30.00004
ORF1ab/nsp15A1-B81A81VgCtgTt8383AY.390.002051
ORF1ab/nsp15A1-B81A81VgCtgTt7575AY.440.000457
ORF1ab/nsp15A1-B81A81VgCtgTt7171B.1.1.5190.002819
ORF1ab/nsp15A1-B81A81VgCtgTt7171B.1.2430.004941
ORF1ab/nsp15A1-B81A81VgCtgTt7070B.1.10.00127
ORF1ab/nsp15A1-B81A81VgCtgTt6262B.1.3510.001843
ORF1ab/nsp15A1-B81A81VgCtgTt5858B.1.1770.000764
ORF1ab/nsp15A1-B81A81VgCtgTt5757B.1.5260.00134
ORF1ab/nsp15A1-B81A81VgCtgTt5555B.1.177.70.009067
ORF1ab/nsp15A1-B81A81VgCtgTt5454B.1.2100.115139
ORF1ab/nsp15A1-B81A81VgCtgTt5353AY.360.007855
ORF1ab/nsp15A1-B81A81VgCtgTt4848AY.80.029091
ORF1ab/nsp15A1-B81A81VgCtgTt4848B.4.40.90566
ORF1ab/nsp15A1-B81A81VgCtgTt4444AY.610.00461
ORF1ab/nsp15A1-B81A81VgCtgTt4242AY.200.001632
ORF1ab/nsp15A1-B81A81SGctTct4242B.1.1.70.000038
ORF1ab/nsp15A1-B81A81VgCtgTt3838B.1.1600.001185
ORF1ab/nsp15A1-B81A81TGctAct3636B.1.1770.000474
ORF1ab/nsp15A1-B81A81TGctAct3535B.1.369.10.945946
ORF1ab/nsp15A1-B81A81VgCtgTt3535B.1.4290.000824
ORF1ab/nsp15A1-B81A81VgCtgTt3333AY.39.10.001307
ORF1ab/nsp15A1-B81A81VgCtgTt3232AY.460.003331
ORF1ab/nsp15A1-B81A81DgCtgAt2929All0.000006
ORF1ab/nsp15A1-B81A81VgCtgTt2929B.1.177.620.034565
ORF1ab/nsp15A1-B81A81VgCtgTt2727B.1.5170.011529
ORF1ab/nsp15A1-B81A81VgCtgTt2626B.1.1.2840.002792
ORF1ab/nsp15A1-B81A81VgCtgTt2424AY.160.009112
ORF1ab/nsp15A1-B81A81SGctTct2424AY.50.000496
ORF1ab/nsp15A1-B81A81VgCtgTt2424B.1.1.330.010101
ORF1ab/nsp15A1-B81A81VgCtgTt2222B.1.6210.001947
ORF1ab/nsp15A1-B81A81VgCtgTt2121AY.290.000331
ORF1ab/nsp15A1-B81A81VgCtgTt2121B.1.1.630.008102
ORF1ab/nsp15A1-B81A81AgcTgcC1820B.1.1.70.000016
ORF1ab/nsp15A1-B81A81AgcTgcA220B.1.1.70.000002
ORF1ab/nsp15A1-B81A81AgcTgcC1920B.1.617.20.000072
ORF1ab/nsp15A1-B81A81AgcTgcA120B.1.617.20.000004
ORF1ab/nsp15A1-B81A81VgCtgTt1919AY.50.000392
ORF1ab/nsp15A1-B81A81VgCtgTt1919B.1.1.2160.016919
ORF1ab/nsp15A1-B81A81SGctTct1919B.1.3350.195876
ORF1ab/nsp15A1-B81A81VgCtgTt1818AY.700.003753
ORF1ab/nsp15A1-B81A81VgCtgTt1818B.1.1.2711
ORF1ab/nsp15A1-B81A81VgCtgTt1818B.1.258.170.001871
ORF1ab/nsp15A1-B81A81VgCtgTt1818B.1.3990.034816
ORF1ab/nsp15A1-B81A81VgCtgTt1717AY.1000.000782
ORF1ab/nsp15A1-B81A81VgCtgTt1717AY.420.000684
ORF1ab/nsp15A1-B81A81VgCtgTt1616B.1.1.3690.00714
ORF1ab/nsp15A1-B81A81VgCtgTt1616B.1.2580.001065
ORF1ab/nsp15A1-B81A81VgCtgTt1515AY.1180.00094
ORF1ab/nsp15A1-B81A81TGctAct1515AY.30.000149
ORF1ab/nsp15A1-B81A81TGctAct1415B.1.617.20.000053
ORF1ab/nsp15A1-B81A81TGcTAcC115B.1.617.20.000004
ORF1ab/nsp15A1-B81A81VgCtgTt1515B.1.6370.001096
ORF1ab/nsp15A1-B81A81VgCtgTt1515D.20.001126
ORF1ab/nsp15A1-B81A81delGCT---1414All0.000003
ORF1ab/nsp15A1-B81A81VgCtgTt1414B.1.1.2140.000776
ORF1ab/nsp15A1-B81A81VgCtgTt1414B.1.2210.000994
ORF1ab/nsp15A1-B81A81VgCtgTt1414B.1.4160.017766
ORF1ab/nsp15A1-B81A81VgCtgTt1313AY.10.005144
ORF1ab/nsp15A1-B81A81VgCtgTt1313AY.1100.001465
ORF1ab/nsp15A1-B81A81VgCtgTt1313AY.1170.001099
ORF1ab/nsp15A1-B81A81VgCtgTt1313AY.910.009496
ORF1ab/nsp15A1-B81A81SGctTct1313B.1.617.20.000049
ORF1ab/nsp15A1-B81A81SGctTct1212AY.40.000019
ORF1ab/nsp15A1-B81A81VgCtgTt1212B.1.4530.038835
ORF1ab/nsp15A1-B81A81AgcTgcC1111AY.30.000109
ORF1ab/nsp15A1-B81A81VgCtgTt1111AY.980.000869
ORF1ab/nsp15A1-B81A81SGctTct1111B.10.000101
ORF1ab/nsp15A1-B81A81VgCtgTt1111B.1.1.3060.004822
ORF1ab/nsp15A1-B81A81VgCtgTt1111B.1.617.10.001419
ORF1ab/nsp15A1-B81A81VgCtgTt1010A.10.002818
ORF1ab/nsp15A1-B81A81VgCtgTt1010AY.1200.000372
ORF1ab/nsp15A1-B81A81VgCtgTt1010AY.150.022222
ORF1ab/nsp15A1-B81A81VgCtgTt1010AY.46.60.000722
ORF1ab/nsp15A1-B81A81VgCtgTt1010B.1.177.210.000765
ORF1ab/nsp15A1-B81A81VgCtgTt1010B.1.6340.034247
ORF1ab/nsp15A1-B81A81SGctTct99AY.200.00035
ORF1ab/nsp15A1-B81A81VgCtgTt99AY.230.000628
ORF1ab/nsp15A1-B81A81VgCtgTt99AY.270.000582
ORF1ab/nsp15A1-B81A81AgcTgcC99AY.40.000014
ORF1ab/nsp15A1-B81A81AgcTgcC99B.1.351.20.002723
ORF1ab/nsp15A1-B81A81VgCtgTt99B.1.5960.000784
ORF1ab/nsp15A1-B81A81VgCtgTt99B.400.003279
ORF1ab/nsp15A1-B81A81VgCtgTt99P.20.00168
ORF1ab/nsp15A1-B81A81VgCtgTt99Q.80.001484
ORF1ab/nsp15A1-B81A81VgCtgTt88AY.470.000249
ORF1ab/nsp15A1-B81A81VgCtgTt88AY.60.000329
ORF1ab/nsp15A1-B81A81VgCtgTt88AY.620.003486
ORF1ab/nsp15A1-B81A81VgCtgTt88AY.7.10.000902
ORF1ab/nsp15A1-B81A81VgCtgTt88AY.98.10.000387
ORF1ab/nsp15A1-B81A81VgCtgTt88B.1.1.3090.046784
ORF1ab/nsp15A1-B81A81VgCtgTt88B.1.1.3680.024691
ORF1ab/nsp15A1-B81A81SGctTct88B.1.20.00007
ORF1ab/nsp15A1-B81A81VgCtgTt88B.1.2400.001725
ORF1ab/nsp15A1-B81A81VgCtgTt88B.1.438.10.000858
ORF1ab/nsp15A1-B81A81VgCtgTt88B.1.5250.000905
ORF1ab/nsp15A1-B81A81DgCtgAt77AY.1200.00026
ORF1ab/nsp15A1-B81A81TGctAct77AY.250.000042
ORF1ab/nsp15A1-B81A81VgCtgTt77AY.340.000679
ORF1ab/nsp15A1-B81A81VgCtgTt77AY.5.30.002362
ORF1ab/nsp15A1-B81A81VgCtgTt77AY.540.000667
ORF1ab/nsp15A1-B81A81VgCtgTt77AY.90.000473
ORF1ab/nsp15A1-B81A81VgCtgTt77B0.000895
ORF1ab/nsp15A1-B81A81AgcTgcC77B.1.10.000127
ORF1ab/nsp15A1-B81A81VgCtgTt77B.1.1.2530.017544
ORF1ab/nsp15A1-B81A81VgCtgTt77B.1.177.730.003964
ORF1ab/nsp15A1-B81A81VgCtgTt77B.1.4000.003003
ORF1ab/nsp15A1-B81A81VgCtgTt66AD.20.001314
ORF1ab/nsp15A1-B81A81VgCtgTt66AY.1130.000854
ORF1ab/nsp15A1-B81A81SGctTct66AY.140.000528
ORF1ab/nsp15A1-B81A81AgcTgcC66AY.9.20.00022
ORF1ab/nsp15A1-B81A81VgCtgTt66AY.99.20.000553
ORF1ab/nsp15A1-B81A81VgCtgTt66B.1.1.3160.00555
ORF1ab/nsp15A1-B81A81VgCtgTt66B.40.013245
ORF1ab/nsp15A1-B81A81VgCtgTt66C.110.06383
ORF1ab/nsp15A1-B81A81VgCtgTt66C.36.30.003403
ORF1ab/nsp15A1-B81A81VgCtgTt66C.370.000696
ORF1ab/nsp15A1-B81A81VgCtgTt66Q.10.000758
ORF1ab/nsp15A1-B81A81PGctCct55All0.000001
ORF1ab/nsp15A1-B81A81VgCtgTt55AY.240.002155
ORF1ab/nsp15A1-B81A81VgCtgTt55AY.4.50.000537
ORF1ab/nsp15A1-B81A81VgCtgTt55AY.5.40.001384
ORF1ab/nsp15A1-B81A81VgCtgTt55AY.590.002648
ORF1ab/nsp15A1-B81A81AgcTgcC45B.10.000037
ORF1ab/nsp15A1-B81A81AgcTgcA15B.10.000009
ORF1ab/nsp15A1-B81A81SGctTct55B.1.1.1890.007564
ORF1ab/nsp15A1-B81A81TGctAct55B.1.1.70.000004
ORF1ab/nsp15A1-B81A81VgCtgTt55B.1.177.40.001055
ORF1ab/nsp15A1-B81A81VgCtgTt55B.1.177.560.003338
ORF1ab/nsp15A1-B81A81VgCtgTt55B.1.2340.00066
ORF1ab/nsp15A1-B81A81VgCtgTt55B.1.4200.052083
ORF1ab/nsp15A1-B81A81VgCtgTt55P.1.120.00242
ORF1ab/nsp15A1-B81A81del1gCtg-t24All0
ORF1ab/nsp15A1-B81A81del1GcTAc-24All0
ORF1ab/nsp15A1-B81A81VgCtgTt44AY.100.00212
ORF1ab/nsp15A1-B81A81VgCtgTt44AY.1160.001147
ORF1ab/nsp15A1-B81A81VgCtgTt44AY.130.000644
ORF1ab/nsp15A1-B81A81SGctTct44AY.250.000024
ORF1ab/nsp15A1-B81A81DgCtgAt44AY.250.000024
ORF1ab/nsp15A1-B81A81VgCtgTt44AY.450.000487
ORF1ab/nsp15A1-B81A81AgcTgcC44AY.700.000834
ORF1ab/nsp15A1-B81A81VgCtgTt44AY.840.00175
ORF1ab/nsp15A1-B81A81VgCtgTt44AY.940.001771
ORF1ab/nsp15A1-B81A81TGctAct44B.10.000037
ORF1ab/nsp15A1-B81A81DgCtgAt44B.1.1.2220.000816
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.1.2630.006231
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.1.3540.017544
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.1.4340.001394
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.360.000584
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.5650.003241
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.5750.001214
ORF1ab/nsp15A1-B81A81VgCtgTt44B.1.5950.001044
ORF1ab/nsp15A1-B81A81VgCtgTt44C.230.023256
ORF1ab/nsp15A1-B81A81VgCtgTt44P.1.100.001078
ORF1ab/nsp15A1-B81A81VgCtgTt44P.1.140.000191
ORF1ab/nsp15A1-B81A81VgCtgTt44P.1.150.000929
ORF1ab/nsp15A1-B81A81VgCtgTt33A.2.50.001497
ORF1ab/nsp15A1-B81A81GgCtgGt33All0.000001
ORF1ab/nsp15A1-B81A81FGCtTTt23All0
ORF1ab/nsp15A1-B81A81FGCTTTC13All0
ORF1ab/nsp15A1-B81A81SGctTct33AY.1000.000138
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.116.10.000934
ORF1ab/nsp15A1-B81A81TGctAct33AY.1180.000188
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.120.10.000963
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.1210.000406
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.140.000264
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.350.000699
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.380.001498
ORF1ab/nsp15A1-B81A81TGctAct33AY.390.000074
ORF1ab/nsp15A1-B81A81DgCtgAt33AY.40.000005
ORF1ab/nsp15A1-B81A81SGctTct33AY.430.000013
ORF1ab/nsp15A1-B81A81TGctAct33AY.440.000018
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.46.40.000494
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.46.50.000595
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.650.001599
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.70.000588
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.740.000347
ORF1ab/nsp15A1-B81A81VgCtgTt33AY.9.10.000251
ORF1ab/nsp15A1-B81A81DgCtgAt33B.10.000027
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.1.3170.001235
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.1.4480.006098
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.1.5230.004687
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.177.570.000843
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.177.680.045455
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.2790.001541
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.36.10.003421
ORF1ab/nsp15A1-B81A81TGctAct33B.1.36.290.001552
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.3690.000856
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.3780.020548
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.4220.002437
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.4970.000944
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.6090.001438
ORF1ab/nsp15A1-B81A81VgCtgTt33B.1.6280.001057
ORF1ab/nsp15A1-B81A81VgCtgTt33C.36.3.10.008152
ORF1ab/nsp15A1-B81A81del1gCtg-t220.111111
ORF1ab/nsp15A1-B81A81delGCT---220.111111
ORF1ab/nsp15A1-B81A81del2gCTg--12All0
ORF1ab/nsp15A1-B81A81del2GCt--t12All0
ORF1ab/nsp15A1-B81A81AgcTgcC22AY.1030.000012
ORF1ab/nsp15A1-B81A81TGctAct22AY.1030.000012
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.1140.000462
ORF1ab/nsp15A1-B81A81TGctAct22AY.140.000176
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.16.10.00094
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.20.000712
ORF1ab/nsp15A1-B81A81SGctTct22AY.260.000057
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.34.10.00102
ORF1ab/nsp15A1-B81A81AgcTgcC22AY.430.000009
ORF1ab/nsp15A1-B81A81delGCT---22AY.430.000009
ORF1ab/nsp15A1-B81A81TGctAct22AY.430.000009
ORF1ab/nsp15A1-B81A81GgCtgGt22AY.440.000012
ORF1ab/nsp15A1-B81A81SGctTct22AY.440.000012
ORF1ab/nsp15A1-B81A81AgcTgcC22AY.450.000243
ORF1ab/nsp15A1-B81A81AgcTgcC22AY.60.000082
ORF1ab/nsp15A1-B81A81SGctTct22AY.610.00021
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.670.000929
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.75.10.000361
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.780.003082
ORF1ab/nsp15A1-B81A81TGctAct22AY.9.20.000073
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.900.001369
ORF1ab/nsp15A1-B81A81VgCtgTt22AY.950.001522
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.1890.003026
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.2220.000408
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.2860.005797
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.3000.021505
ORF1ab/nsp15A1-B81A81SGctTct22B.1.1.3160.00185
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.3720.001377
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.3770.002762
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.4160.00181
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.4580.083333
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.1.5210.010695
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.160.100.016129
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.177.150.001262
ORF1ab/nsp15A1-B81A81AgcTgcC22B.1.20.000018
ORF1ab/nsp15A1-B81A81SGctTct22B.1.2430.000139
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.258.120.015748
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.3110.000549
ORF1ab/nsp15A1-B81A81SGctTct22B.1.3510.000059
ORF1ab/nsp15A1-B81A81AgcTgcC22B.1.360.000292
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.36.290.001035
ORF1ab/nsp15A1-B81A81TGctAct22B.1.3690.00057
ORF1ab/nsp15A1-B81A81SGctTct22B.1.3990.003868
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.4990.002101
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.5640.000852
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.564.10.003155
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.5740.004301
ORF1ab/nsp15A1-B81A81TGctAct22B.1.5750.000607
ORF1ab/nsp15A1-B81A81DgCtgAt22B.1.617.20.000008
ORF1ab/nsp15A1-B81A81VgCtgTt22B.1.6200.001892
ORF1ab/nsp15A1-B81A81VgCtgTt22B.280.006557
ORF1ab/nsp15A1-B81A81VgCtgTt22C.37.10.005236
ORF1ab/nsp15A1-B81A81SGctTct22D.20.00015
ORF1ab/nsp15A1-B81A81AgcTgcC22P.20.000373
ORF1ab/nsp15A1-B81A81VgCtgTt22Q.20.001227
ORF1ab/nsp15A1-B81A81TGctAct11A0.000387
ORF1ab/nsp15A1-B81A81VgCtgTt11A.280.002646
ORF1ab/nsp15A1-B81A81VgCtgTt11A.60.005128
ORF1ab/nsp15A1-B81A81VgCtgTt11AE.80.000489
ORF1ab/nsp15A1-B81A81VgCtgTt11AW.10.003049
ORF1ab/nsp15A1-B81A81PGctCct11AY.1000.000046
ORF1ab/nsp15A1-B81A81TGctAct11AY.1000.000046
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.1010.00049
ORF1ab/nsp15A1-B81A81DgCtgAt11AY.1030.000006
ORF1ab/nsp15A1-B81A81del1GcTAc-11AY.1030.000006
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.1040.001984
ORF1ab/nsp15A1-B81A81SGctTct11AY.1060.000335
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.1060.000335
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.1080.001103
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.1110.000183
ORF1ab/nsp15A1-B81A81del2gCTg--11AY.1190.000035
ORF1ab/nsp15A1-B81A81DgCtgAt11AY.130.000161
ORF1ab/nsp15A1-B81A81PGctCct11AY.20.000356
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.200.000039
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.220.002092
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.23.10.000417
ORF1ab/nsp15A1-B81A81DgCtgAt11AY.240.000431
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.250.000006
ORF1ab/nsp15A1-B81A81DgCtgAt11AY.260.000028
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.260.000028
ORF1ab/nsp15A1-B81A81SGctTct11AY.30.00001
ORF1ab/nsp15A1-B81A81SGctTct11AY.3.10.000085
ORF1ab/nsp15A1-B81A81TGctAct11AY.3.10.000085
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.3.10.000085
ORF1ab/nsp15A1-B81A81AgcTgcA11AY.34.10.00051
ORF1ab/nsp15A1-B81A81DgCtgAt11AY.360.000148
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.390.000025
ORF1ab/nsp15A1-B81A81DgCtgAt11AY.390.000025
ORF1ab/nsp15A1-B81A81GgCtgGt11AY.40.000002
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.4.2.10.000149
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.4.30.000842
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.4.40.000409
ORF1ab/nsp15A1-B81A81SGctTct11AY.420.00004
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.440.000006
ORF1ab/nsp15A1-B81A81FGCTTTC11AY.440.000006
ORF1ab/nsp15A1-B81A81delGCT---11AY.440.000006
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.46.10.001027
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.470.000031
ORF1ab/nsp15A1-B81A81TGctAct11AY.50.000021
ORF1ab/nsp15A1-B81A81TGctAct11AY.540.000095
ORF1ab/nsp15A1-B81A81AgcTgcA11AY.540.000095
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.550.000917
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.640.000595
ORF1ab/nsp15A1-B81A81del1GcTAc-11AY.670.000464
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.680.000274
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.690.000187
ORF1ab/nsp15A1-B81A81TGctAct11AY.7.10.000113
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.7.20.000559
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.710.000475
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.720.001361
ORF1ab/nsp15A1-B81A81SGctTct11AY.740.000116
ORF1ab/nsp15A1-B81A81SGctTct11AY.790.001211
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.820.001357
ORF1ab/nsp15A1-B81A81SGctTct11AY.830.001724
ORF1ab/nsp15A1-B81A81TGctAct11AY.840.000437
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.850.000427
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.860.00083
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.870.000833
ORF1ab/nsp15A1-B81A81VgCtgTt11AY.920.000287
ORF1ab/nsp15A1-B81A81TGctAct11AY.930.000273
ORF1ab/nsp15A1-B81A81AgcTgcC11AY.980.000079
ORF1ab/nsp15A1-B81A81VgCtgTt11AZ.20.000821
ORF1ab/nsp15A1-B81A81VgCtgTt11AZ.30.00152
ORF1ab/nsp15A1-B81A81delGCT---11B.10.000009
ORF1ab/nsp15A1-B81A81PGctCct11B.10.000009
ORF1ab/nsp15A1-B81A81TGctAct11B.1.10.000018
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.1490.016393
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.1630.007634
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.1700.001247
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.1740.003378
ORF1ab/nsp15A1-B81A81SGctTct11B.1.1.1980.001468
ORF1ab/nsp15A1-B81A81FGCtTTt11B.1.1.2160.00089
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.1.2320.001815
ORF1ab/nsp15A1-B81A81TGctAct11B.1.1.250.000569
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.2510.007937
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.2690.001353
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.270.00565
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.280.000311
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.1.2820.011628
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.2880.001916
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.1.3260.001761
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.3290.003846
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.3330.001076
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.3370.003597
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.3490.010309
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.3710.010417
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.4490.022727
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.4610.012048
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.4660.008696
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.500.000679
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.510.001718
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.5260.003546
ORF1ab/nsp15A1-B81A81SGctTct11B.1.1.530.013699
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1.590.006494
ORF1ab/nsp15A1-B81A81delGCT---11B.1.1.70.000001
ORF1ab/nsp15A1-B81A81PGctCct11B.1.1.70.000001
ORF1ab/nsp15A1-B81A81delGCT---11B.1.1.700.000341
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1110.001175
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1190.010526
ORF1ab/nsp15A1-B81A81SGctTct11B.1.1600.000031
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.1700.00431
ORF1ab/nsp15A1-B81A81SGctTct11B.1.1770.000013
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.177.120.000152
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.177.350.000691
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.177.520.001757
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.177.60.000977
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.177.600.000218
ORF1ab/nsp15A1-B81A81SGctTct11B.1.1940.04
ORF1ab/nsp15A1-B81A81delGCT---11B.1.20.000009
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.2100.002132
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.214.10.02
ORF1ab/nsp15A1-B81A81SGctTct11B.1.2180.005155
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.2220.001692
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.243.10.022222
ORF1ab/nsp15A1-B81A81delGCT---11B.1.2580.000067
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.258.110.000396
ORF1ab/nsp15A1-B81A81SGctTct11B.1.258.140.00098
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.258.70.001912
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.2600.003344
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.2760.016949
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.2800.007143
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.3490.000715
ORF1ab/nsp15A1-B81A81TGctAct11B.1.3510.00003
ORF1ab/nsp15A1-B81A81delGCT---11B.1.3510.00003
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.351.50.0006
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.3590.022727
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.36.180.00042
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.36.180.00042
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.36.240.006173
ORF1ab/nsp15A1-B81A81TGctAct11B.1.36.250.002208
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.362.20.004717
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.3710.001122
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.3960.000706
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4070.035714
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4090.000781
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.4270.00005
ORF1ab/nsp15A1-B81A81SGctTct11B.1.4290.000024
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4360.001029
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4410.009615
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4620.007246
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.466.20.000391
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.466.20.000391
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4690.00361
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.4700.001404
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.4970.000315
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5090.000866
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5210.004975
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.5250.000113
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5440.006024
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5490.007194
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5510.00129
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5580.004566
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5700.002941
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5770.000687
ORF1ab/nsp15A1-B81A81SGctTct11B.1.5800.004065
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.5820.000491
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.595.30.026316
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.6000.005848
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.6120.002653
ORF1ab/nsp15A1-B81A81SGctTct11B.1.617.10.000129
ORF1ab/nsp15A1-B81A81AgcTgcC11B.1.617.10.000129
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.6230.000536
ORF1ab/nsp15A1-B81A81delGCT---11B.1.6300.005236
ORF1ab/nsp15A1-B81A81VgCtgTt11B.1.6360.006711
ORF1ab/nsp15A1-B81A81TGctAct11B.1.6370.000073
ORF1ab/nsp15A1-B81A81VgCtgTt11B.230.002924
ORF1ab/nsp15A1-B81A81VgCtgTt11B.30.000831
ORF1ab/nsp15A1-B81A81TGctAct11B.40.002208
ORF1ab/nsp15A1-B81A81VgCtgTt11B.600.015873
ORF1ab/nsp15A1-B81A81VgCtgTt11C.1.10.076923
ORF1ab/nsp15A1-B81A81VgCtgTt11C.160.00106
ORF1ab/nsp15A1-B81A81VgCtgTt11C.360.000911
ORF1ab/nsp15A1-B81A81VgCtgTt11C.36.10.004149
ORF1ab/nsp15A1-B81A81AgcTgcC11C.36.30.000567
ORF1ab/nsp15A1-B81A81FGCtTTt11C.380.008065
ORF1ab/nsp15A1-B81A81AgcTgcA11D.20.000075
ORF1ab/nsp15A1-B81A81PGctCct11D.20.000075
ORF1ab/nsp15A1-B81A81del2GCt--t11D.20.000075
ORF1ab/nsp15A1-B81A81VgCtgTt11L.30.003546
ORF1ab/nsp15A1-B81A81delGCT---11P.10.000016
ORF1ab/nsp15A1-B81A81TGctAct11P.10.000016
ORF1ab/nsp15A1-B81A81delGCT---11P.1.150.000232
ORF1ab/nsp15A1-B81A81VgCtgTt11P.1.170.000162
ORF1ab/nsp15A1-B81A81VgCtgTt11P.1.70.000319
ORF1ab/nsp15A1-B81A81SGctTct11P.20.000187
ORF1ab/nsp15A1-B81A81VgCtgTt11P.50.013699
ORF1ab/nsp15A1-B81A81SGctTct11Q.10.000126
ORF1ab/nsp15A1-B81A81AgcTgcC11Q.30.000145
ORF1ab/nsp15A1-B81A81VgCtgTt11R.10.00009
ORF1ab/nsp15A1-B81A81VgCtgTt11W.40.001351