CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 66 | V66L | V6518L | nonsyn | Gta | Tta | 7557 | 7500 | 0.992457 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66L | V6518L | nonsyn | Gta | Cta | 7557 | 57 | 0.00754268 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66I | V6518I | nonsyn | Gta | Ata | 436 | 436 | 1 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66V | V6518V | syn | gtA | gtG | 315 | 291 | 0.92381 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66V | V6518V | syn | gtA | gtC | 315 | 17 | 0.0539683 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66V | V6518V | syn | gtA | gtT | 315 | 7 | 0.0222222 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66A | V6518A | nonsyn | gTa | gCa | 58 | 58 | 1 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66del | V6518del | del | GTA | --- | 37 | 37 | 1 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66E | V6518E | nonsyn | gTa | gAa | 2 | 2 | 1 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66del1 | V6518del1 | del | gtA | gt- | 2 | 1 | 0.5 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66del1 | V6518del1 | del | Gta | -ta | 2 | 1 | 0.5 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66D | V6518D | nonsyn | gTA | gAC | 1 | 1 | 1 | 19816-19818 |
ORF1ab/nsp15A1-B | 66 | V66C | V6518C | nonsyn | GTA | TGC | 1 | 1 | 1 | 19816-19818 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7500 | 7557 | All | 0.001434 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 57 | 7557 | All | 0.000011 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1341 | 1341 | AY.4 | 0.002087 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 883 | 885 | B.1.1.7 | 0.00079 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 2 | 885 | B.1.1.7 | 0.000002 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 518 | 531 | B.1.617.2 | 0.00195 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 13 | 531 | B.1.617.2 | 0.000049 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 472 | 472 | B.1.429 | 0.011106 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 436 | 436 | All | 0.000083 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 291 | 315 | All | 0.000056 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 17 | 315 | All | 0.000003 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 7 | 315 | All | 0.000001 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 296 | 296 | AY.43 | 0.001311 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 272 | 272 | AY.85 | 0.11619 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 227 | 227 | B.1.469 | 0.819495 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 219 | 219 | B.1.2 | 0.001928 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 212 | 212 | AY.4.2 | 0.004598 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 198 | 199 | AY.3 | 0.001969 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 199 | AY.3 | 0.00001 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 168 | 169 | B.1 | 0.001539 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 169 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 162 | 162 | B.1.177 | 0.002133 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 146 | 149 | B.1.351 | 0.00434 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 3 | 149 | B.1.351 | 0.000089 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 139 | 139 | AY.4 | 0.000216 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 94 | 94 | AY.25 | 0.000565 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 90 | 91 | AY.44 | 0.000548 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 91 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 90 | 90 | B.1.590 | 0.409091 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 89 | 89 | AY.100 | 0.004095 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 83 | 83 | B.1.131 | 0.72807 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 81 | 81 | AY.5.4 | 0.022413 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 79 | 80 | B.1.1 | 0.001433 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 80 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 71 | 71 | AY.3 | 0.000706 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 69 | 69 | AY.102 | 0.001829 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 66 | 67 | B.1.177 | 0.000869 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 1 | 67 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 63 | 63 | P.1 | 0.000993 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 59 | 59 | B.1.595.1 | 0.345029 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 58 | 58 | All | 0.000011 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 50 | 50 | AY.5 | 0.001032 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 50 | 50 | B.1.258.15 | 0.943396 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 49 | 49 | B.1.177.19 | 0.0701 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 47 | 47 | B.1.36 | 0.006857 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 46 | 46 | AY.26 | 0.001302 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 44 | 44 | AY.103 | 0.000273 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 42 | 42 | B.1.1 | 0.000762 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 41 | 41 | B.1.1.222 | 0.008364 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 40 | 40 | AY.39 | 0.000988 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 39 | 39 | B.1.177.75 | 0.040583 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 38 | 38 | AY.6 | 0.001563 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 37 | 37 | All | 0.000007 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 36 | 36 | AY.98.1 | 0.001744 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 36 | 36 | B.1.1.519 | 0.00143 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 32 | 32 | AY.42 | 0.001287 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 32 | 32 | P.1.17 | 0.005176 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 31 | 31 | R.1 | 0.00279 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 27 | 27 | AY.33 | 0.001803 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 27 | 27 | B.1.617.2 | 0.000102 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 26 | 26 | AY.105 | 0.01672 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 25 | 25 | B.1.1.316 | 0.023127 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 24 | 24 | AY.4 | 0.000037 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 23 | 23 | AY.84 | 0.010061 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 23 | 23 | B.1.621 | 0.002036 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 22 | 22 | B.1.177.45 | 0.008387 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 21 | 21 | AY.103 | 0.00013 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 21 | 21 | B.1.160.29 | 0.088608 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 21 | 21 | B.1.526 | 0.000494 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 20 | 20 | B.1.1.7 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 20 | 20 | B.1.497 | 0.006295 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 19 | 19 | AY.47 | 0.000591 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 19 | 19 | B.1.1.519 | 0.000755 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 11 | 19 | B.1.1.7 | 0.00001 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 8 | 19 | B.1.1.7 | 0.000007 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 18 | 18 | AY.103 | 0.000112 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 18 | 18 | B.1.1.130 | 0.276923 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 18 | 18 | B.1.1.214 | 0.000998 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 18 | 18 | B.1.243 | 0.001253 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 18 | 18 | B.1.258 | 0.001198 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 17 | 17 | AY.119 | 0.0006 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 17 | 17 | AY.75 | 0.000952 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 17 | 17 | B.1.177.4 | 0.003588 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 16 | 17 | B.1.525 | 0.001811 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 17 | B.1.525 | 0.000113 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 16 | 16 | AY.20 | 0.000622 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 16 | 16 | B.1.1.291 | 0.011878 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 16 | 16 | B.1.427 | 0.000808 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 8 | 15 | AY.106 | 0.002679 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 7 | 15 | AY.106 | 0.002344 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 15 | 15 | AY.23 | 0.001046 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 15 | 15 | AY.62 | 0.006536 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 15 | 15 | B.1.1.516 | 1 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 14 | 14 | AY.52 | 0.011401 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 14 | 14 | AY.9 | 0.000946 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 14 | 14 | AY.92 | 0.004022 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 13 | 14 | B.1.221 | 0.000923 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 14 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 13 | 13 | AY.9.2 | 0.000477 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 13 | 13 | B.1.36.29 | 0.006725 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 12 | 12 | AY.118 | 0.000752 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 12 | AY.61 | 0.000733 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 5 | 12 | AY.61 | 0.000524 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 12 | 12 | AY.66 | 0.012834 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 12 | 12 | B.1.1.176 | 0.005272 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 11 | 11 | B.1.1.1 | 0.003594 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 11 | 11 | B.1.177.87 | 0.008006 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 11 | 11 | P.2 | 0.002053 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 10 | 10 | AY.13 | 0.00161 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 10 | 10 | AY.96 | 0.020747 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 9 | 9 | AY.3 | 0.00009 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 9 | 9 | AY.34 | 0.000873 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 9 | 9 | AY.4.5 | 0.000967 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 9 | 9 | AY.94 | 0.003984 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 6 | 9 | B.1 | 0.000055 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 2 | 9 | B.1 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 1 | 9 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 9 | 9 | B.1.1.28 | 0.002801 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 9 | 9 | B.1.1.7 | 0.000008 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 9 | 9 | B.1.160 | 0.000281 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 9 | 9 | B.1.177.52 | 0.015817 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 8 | 8 | AY.117 | 0.000676 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 8 | 8 | AY.34.1 | 0.00408 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 7 | AY.108 | 0.007718 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 7 | AY.120 | 0.00026 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 7 | AY.121 | 0.000947 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 7 | AY.46 | 0.000729 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 7 | AY.99.2 | 0.000645 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 7 | 7 | B.1.160 | 0.000218 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | AD.2 | 0.001314 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | AY.111 | 0.001099 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | AY.35 | 0.001398 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 6 | AY.75.1 | 0.000541 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 3 | 6 | AY.75.1 | 0.000541 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | AY.9.1 | 0.000502 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | B.1.258.17 | 0.000624 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | B.1.298 | 0.012685 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | B.1.367 | 0.004754 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 6 | 6 | B.1.564 | 0.002555 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | A | 0.001935 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | AY.30 | 0.001979 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | AY.81 | 0.00996 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.1.277 | 0.003794 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.1.305 | 0.019305 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.139 | 0.003666 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.239 | 0.006105 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.402 | 0.04902 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.626 | 0.028571 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 5 | 5 | B.1.93 | 0.004669 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 5 | 5 | B.4 | 0.011038 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 5 | 5 | P.1.4 | 0.004883 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 4 | 4 | AY.102 | 0.000106 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | AY.7.2 | 0.002237 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.1.189 | 0.006051 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.1.216 | 0.003562 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.1.284 | 0.00043 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.158 | 0.095238 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.160.10 | 0.032258 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.177.56 | 0.00267 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.177.9 | 0.005326 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.1.609 | 0.001918 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | B.6 | 0.00364 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 3 | 4 | P.1 | 0.000047 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 4 | P.1 | 0.000016 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 4 | 4 | P.1.1 | 0.001271 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.1.273 | 0.02027 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.1.39 | 0.001529 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.1.63 | 0.001157 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.177.42 | 0.002683 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.206 | 0.002447 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.36.8 | 0.003 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.456 | 0.009804 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.462 | 0.021739 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | B.1.612 | 0.007958 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 3 | 3 | N.5 | 0.0053 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | A.5 | 0.003846 |
ORF1ab/nsp15A1-B | 66 | V66E | gTa | gAa | 2 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 66 | V66del1 | gtA | gt- | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 66 | V66del1 | Gta | -ta | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B | 0.000256 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 1 | 2 | B.1.1.1 | 0.000327 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 2 | B.1.1.1 | 0.000327 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.1.269 | 0.002706 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.1.302 | 0.004149 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.146 | 0.008475 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.177.33 | 0.003289 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.177.35 | 0.001382 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.179 | 0.007519 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.274 | 0.02381 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.351.2 | 0.000605 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.351.5 | 0.001199 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.36.39 | 0.004435 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.366 | 0.009756 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.543 | 0.02 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | C.35 | 0.001548 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp15A1-B | 66 | V66D | gTA | gAC | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 66 | V66C | GTA | TGC | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp15A1-B | 66 | V66E | gTa | gAa | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.91.1 | 0.004065 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66E | gTa | gAa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66del1 | Gta | -ta | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 1 | B.1.1.134 | 0.011364 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.136 | 0.021277 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.1.210 | 0.005714 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 1 | B.1.1.229 | 0.005747 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtT | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.449 | 0.022727 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.61 | 0.008772 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.1.89 | 0.006061 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.117 | 0.0125 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.177.14 | 0.006098 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.182 | 0.007246 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66D | gTA | gAC | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.221.1 | 0.002907 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.36.2 | 0.010753 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | B.1.36.27 | 0.000763 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.438 | 0.006536 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 1 | B.1.44 | 0.008333 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Cta | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.485 | 0.014925 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 66 | V66del1 | gtA | gt- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | B.46 | 0.020833 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp15A1-B | 66 | V66A | gTa | gCa | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtC | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 66 | V66I | Gta | Ata | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp15A1-B | 66 | V66C | GTA | TGC | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp15A1-B | 66 | V66V | gtA | gtG | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp15A1-B | 66 | V66del | GTA | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp15A1-B | 66 | V66L | Gta | Tta | 1 | 1 | W.1 | 0.008696 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|