CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 65

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B65P65SP6517SnonsynCcaTca612161200.99983719813-19815
ORF1ab/nsp15A1-B65P65SP6517SnonsynCcATcT612110.00016337219813-19815
ORF1ab/nsp15A1-B65P65PP6517PsynccAccT157013200.84076419813-19815
ORF1ab/nsp15A1-B65P65PP6517PsynccAccG15701490.094904519813-19815
ORF1ab/nsp15A1-B65P65PP6517PsynccAccC15701010.064331219813-19815
ORF1ab/nsp15A1-B65P65LP6517LnonsyncCacTa273273119813-19815
ORF1ab/nsp15A1-B65P65TP6517TnonsynCcaAca4343119813-19815
ORF1ab/nsp15A1-B65P65delP6517deldelCCA---3636119813-19815
ORF1ab/nsp15A1-B65P65QP6517QnonsyncCacAa18170.94444419813-19815
ORF1ab/nsp15A1-B65P65QP6517QnonsyncCAcAG1810.055555619813-19815
ORF1ab/nsp15A1-B65P65del1P6517del1delCca-ca22119813-19815
ORF1ab/nsp15A1-B65P65RP6517RnonsyncCacGa11119813-19815
ORF1ab/nsp15A1-B65P65del2P6517del2delcCAc--11119813-19815
ORF1ab/nsp15A1-B65P65CP6517CnonsynCCATGT11119813-19815
ORF1ab/nsp15A1-B65P65KP6517KnonsynCCaAAa11119813-19815
ORF1ab/nsp15A1-B65P65AP6517AnonsynCcaGca11119813-19815

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B65P65SCcaTca61206121All0.001171
ORF1ab/nsp15A1-B65P65SCcATcT16121All0
ORF1ab/nsp15A1-B65P65PccAccT13201570All0.000252
ORF1ab/nsp15A1-B65P65PccAccG1491570All0.000028
ORF1ab/nsp15A1-B65P65PccAccC1011570All0.000019
ORF1ab/nsp15A1-B65P65SCcaTca11271127B.1.1.70.001009
ORF1ab/nsp15A1-B65P65SCcaTca11141114AY.200.043296
ORF1ab/nsp15A1-B65P65SCcaTca10071007B.1.617.10.129868
ORF1ab/nsp15A1-B65P65PccAccT901901AY.870.750208
ORF1ab/nsp15A1-B65P65SCcaTca875875AY.40.001362
ORF1ab/nsp15A1-B65P65LcCacTa273273All0.000052
ORF1ab/nsp15A1-B65P65SCcaTca233233B.1.617.20.000877
ORF1ab/nsp15A1-B65P65SCcaTca205205AY.290.003234
ORF1ab/nsp15A1-B65P65PccAccT139139AY.50.00287
ORF1ab/nsp15A1-B65P65SCcaTca125125B.1.4800.310945
ORF1ab/nsp15A1-B65P65SCcaTca104104AY.440.000633
ORF1ab/nsp15A1-B65P65PccAccC7293AY.40.000112
ORF1ab/nsp15A1-B65P65PccAccT1893AY.40.000028
ORF1ab/nsp15A1-B65P65PccAccG393AY.40.000005
ORF1ab/nsp15A1-B65P65PccAccT8585AY.420.00342
ORF1ab/nsp15A1-B65P65SCcaTca7373B.1.1.5190.002899
ORF1ab/nsp15A1-B65P65SCcaTca7272B.1.20.000634
ORF1ab/nsp15A1-B65P65PccAccT6170B.1.617.20.00023
ORF1ab/nsp15A1-B65P65PccAccG970B.1.617.20.000034
ORF1ab/nsp15A1-B65P65SCcaTca6868AY.250.000409
ORF1ab/nsp15A1-B65P65LcCacTa6767AY.40.000104
ORF1ab/nsp15A1-B65P65SCcaTca6565AY.30.000647
ORF1ab/nsp15A1-B65P65SCcaTca6363B.10.000577
ORF1ab/nsp15A1-B65P65SCcaTca5757B.1.10.001034
ORF1ab/nsp15A1-B65P65SCcaTca4747AY.1030.000292
ORF1ab/nsp15A1-B65P65PccAccG4344AY.1030.000267
ORF1ab/nsp15A1-B65P65PccAccT144AY.1030.000006
ORF1ab/nsp15A1-B65P65TCcaAca4343All0.000008
ORF1ab/nsp15A1-B65P65SCcaTca4242AY.430.000186
ORF1ab/nsp15A1-B65P65PccAccT2242B.1.1.70.00002
ORF1ab/nsp15A1-B65P65PccAccG1642B.1.1.70.000014
ORF1ab/nsp15A1-B65P65PccAccC442B.1.1.70.000004
ORF1ab/nsp15A1-B65P65SCcaTca4141AY.1200.001524
ORF1ab/nsp15A1-B65P65delCCA---3636All0.000007
ORF1ab/nsp15A1-B65P65SCcaTca3636B.1.2410.029221
ORF1ab/nsp15A1-B65P65SCcaTca3131B.1.1770.000408
ORF1ab/nsp15A1-B65P65PccAccT1728AY.440.000103
ORF1ab/nsp15A1-B65P65PccAccG1128AY.440.000067
ORF1ab/nsp15A1-B65P65SCcaTca2626B.1.258.170.002703
ORF1ab/nsp15A1-B65P65SCcaTca2626P.10.00041
ORF1ab/nsp15A1-B65P65SCcaTca2424AY.390.000593
ORF1ab/nsp15A1-B65P65SCcaTca2222AY.1210.002977
ORF1ab/nsp15A1-B65P65SCcaTca2121AY.46.40.003455
ORF1ab/nsp15A1-B65P65SCcaTca1919AY.360.002816
ORF1ab/nsp15A1-B65P65LcCacTa1919AY.440.000116
ORF1ab/nsp15A1-B65P65SCcaTca1919B0.002428
ORF1ab/nsp15A1-B65P65QcCacAa1718All0.000003
ORF1ab/nsp15A1-B65P65QcCAcAG118All0
ORF1ab/nsp15A1-B65P65SCcaTca1717AY.420.000684
ORF1ab/nsp15A1-B65P65PccAccT1217AY.430.000053
ORF1ab/nsp15A1-B65P65PccAccG517AY.430.000022
ORF1ab/nsp15A1-B65P65SCcaTca1717AY.50.000351
ORF1ab/nsp15A1-B65P65SCcaTca1717B.1.177.550.039627
ORF1ab/nsp15A1-B65P65SCcaTca1717B.1.3110.004668
ORF1ab/nsp15A1-B65P65LcCacTa1616AY.250.000096
ORF1ab/nsp15A1-B65P65SCcaTca1616AY.9.20.000588
ORF1ab/nsp15A1-B65P65SCcaTca1616B.1.2430.001113
ORF1ab/nsp15A1-B65P65SCcaTca1515AY.1020.000398
ORF1ab/nsp15A1-B65P65LcCacTa1515AY.430.000066
ORF1ab/nsp15A1-B65P65PccAccC1515AY.750.00084
ORF1ab/nsp15A1-B65P65PccAccG1415B.1.20.000123
ORF1ab/nsp15A1-B65P65PccAccT115B.1.20.000009
ORF1ab/nsp15A1-B65P65LcCacTa1515B.1.617.20.000056
ORF1ab/nsp15A1-B65P65SCcaTca1313AY.1130.001851
ORF1ab/nsp15A1-B65P65SCcaTca1313AY.470.000404
ORF1ab/nsp15A1-B65P65SCcaTca1313B.1.2580.000865
ORF1ab/nsp15A1-B65P65SCcaTca1313Q.80.002144
ORF1ab/nsp15A1-B65P65LcCacTa1212AY.1030.000075
ORF1ab/nsp15A1-B65P65PccAccT1111AY.1190.000388
ORF1ab/nsp15A1-B65P65SCcaTca1111AY.4.20.000239
ORF1ab/nsp15A1-B65P65SCcaTca1111C.36.30.006239
ORF1ab/nsp15A1-B65P65SCcaTca1111Q.20.006748
ORF1ab/nsp15A1-B65P65LcCacTa1010B.10.000092
ORF1ab/nsp15A1-B65P65TCcaAca1010B.1.1.70.000009
ORF1ab/nsp15A1-B65P65SCcaTca1010B.1.1600.000312
ORF1ab/nsp15A1-B65P65SCcaTca1010B.1.177.750.010406
ORF1ab/nsp15A1-B65P65SCcaTca99AY.99.20.000829
ORF1ab/nsp15A1-B65P65SCcaTca99B.1.4710.02459
ORF1ab/nsp15A1-B65P65SCcaTca88AY.1180.000501
ORF1ab/nsp15A1-B65P65SCcaTca88AY.260.000226
ORF1ab/nsp15A1-B65P65PccAccG58AY.30.00005
ORF1ab/nsp15A1-B65P65PccAccT28AY.30.00002
ORF1ab/nsp15A1-B65P65PccAccC18AY.30.00001
ORF1ab/nsp15A1-B65P65PccAccT88AY.460.000833
ORF1ab/nsp15A1-B65P65QcCacAa78B.10.000064
ORF1ab/nsp15A1-B65P65QcCAcAG18B.10.000009
ORF1ab/nsp15A1-B65P65SCcaTca88B.1.1.3170.003294
ORF1ab/nsp15A1-B65P65LcCacTa88B.1.1.4160.00724
ORF1ab/nsp15A1-B65P65delCCA---88B.1.1.70.000007
ORF1ab/nsp15A1-B65P65SCcaTca77AY.1170.000592
ORF1ab/nsp15A1-B65P65PccAccC37B.10.000027
ORF1ab/nsp15A1-B65P65PccAccG27B.10.000018
ORF1ab/nsp15A1-B65P65PccAccT27B.10.000018
ORF1ab/nsp15A1-B65P65SCcaTca77B.1.1.2140.000388
ORF1ab/nsp15A1-B65P65SCcaTca77B.1.1.280.002179
ORF1ab/nsp15A1-B65P65SCcaTca77B.1.3510.000208
ORF1ab/nsp15A1-B65P65SCcaTca77B.1.360.001021
ORF1ab/nsp15A1-B65P65SCcaTca77B.1.4290.000165
ORF1ab/nsp15A1-B65P65SCcaTca77B.1.5260.000165
ORF1ab/nsp15A1-B65P65SCcaTca66AY.1190.000212
ORF1ab/nsp15A1-B65P65LcCacTa66AY.30.00006
ORF1ab/nsp15A1-B65P65LcCacTa66AY.330.000401
ORF1ab/nsp15A1-B65P65PccAccG46AY.390.000099
ORF1ab/nsp15A1-B65P65PccAccT26AY.390.000049
ORF1ab/nsp15A1-B65P65SCcaTca66AY.46.60.000433
ORF1ab/nsp15A1-B65P65SCcaTca66B.1.1.3680.018519
ORF1ab/nsp15A1-B65P65LcCacTa66B.1.1.70.000005
ORF1ab/nsp15A1-B65P65SCcaTca66B.1.5610.002382
ORF1ab/nsp15A1-B65P65LcCacTa55AY.290.000079
ORF1ab/nsp15A1-B65P65SCcaTca55AY.39.10.000198
ORF1ab/nsp15A1-B65P65TCcaAca55AY.40.000008
ORF1ab/nsp15A1-B65P65TCcaAca55B.10.000046
ORF1ab/nsp15A1-B65P65SCcaTca55B.1.1.250.002843
ORF1ab/nsp15A1-B65P65PccAccG25B.1.1770.000026
ORF1ab/nsp15A1-B65P65PccAccC25B.1.1770.000026
ORF1ab/nsp15A1-B65P65PccAccT15B.1.1770.000013
ORF1ab/nsp15A1-B65P65SCcaTca55B.1.2400.001078
ORF1ab/nsp15A1-B65P65LcCacTa44AY.200.000155
ORF1ab/nsp15A1-B65P65SCcaTca44AY.300.001583
ORF1ab/nsp15A1-B65P65SCcaTca44AY.330.000267
ORF1ab/nsp15A1-B65P65LcCacTa44AY.390.000099
ORF1ab/nsp15A1-B65P65PccAccG44AY.39.10.000158
ORF1ab/nsp15A1-B65P65LcCacTa44AY.39.10.000158
ORF1ab/nsp15A1-B65P65SCcaTca44AY.450.000487
ORF1ab/nsp15A1-B65P65TCcaAca44AY.50.000083
ORF1ab/nsp15A1-B65P65SCcaTca44AY.640.002381
ORF1ab/nsp15A1-B65P65SCcaTca44AY.740.000463
ORF1ab/nsp15A1-B65P65SCcaTca44B.1.1.1280.028369
ORF1ab/nsp15A1-B65P65SCcaTca44B.1.1.1760.001757
ORF1ab/nsp15A1-B65P65LcCacTa44B.1.1770.000053
ORF1ab/nsp15A1-B65P65SCcaTca44B.1.177.820.001909
ORF1ab/nsp15A1-B65P65LcCacTa44B.1.20.000035
ORF1ab/nsp15A1-B65P65PccAccT44B.1.2580.000266
ORF1ab/nsp15A1-B65P65SCcaTca44B.1.36.180.001681
ORF1ab/nsp15A1-B65P65SCcaTca44B.1.4270.000202
ORF1ab/nsp15A1-B65P65PccAccT44B.1.438.10.000429
ORF1ab/nsp15A1-B65P65SCcaTca44B.1.6210.000354
ORF1ab/nsp15A1-B65P65SCcaTca44R.10.00036
ORF1ab/nsp15A1-B65P65LcCacTa33AY.1000.000138
ORF1ab/nsp15A1-B65P65LcCacTa33AY.1020.00008
ORF1ab/nsp15A1-B65P65PccAccG33AY.1020.00008
ORF1ab/nsp15A1-B65P65SCcaTca33AY.1140.000693
ORF1ab/nsp15A1-B65P65SCcaTca33AY.120.2.10.001495
ORF1ab/nsp15A1-B65P65LcCacTa33AY.230.000209
ORF1ab/nsp15A1-B65P65PccAccT33AY.300.001187
ORF1ab/nsp15A1-B65P65SCcaTca33AY.340.000291
ORF1ab/nsp15A1-B65P65SCcaTca33AY.60.000123
ORF1ab/nsp15A1-B65P65PccAccG33AY.80.001818
ORF1ab/nsp15A1-B65P65SCcaTca33AY.880.002653
ORF1ab/nsp15A1-B65P65SCcaTca33AY.98.10.000145
ORF1ab/nsp15A1-B65P65delCCA---33B.10.000027
ORF1ab/nsp15A1-B65P65SCcaTca33B.1.1.330.001263
ORF1ab/nsp15A1-B65P65SCcaTca33B.1.1.4090.008499
ORF1ab/nsp15A1-B65P65LcCacTa33B.1.1.5190.000119
ORF1ab/nsp15A1-B65P65SCcaTca33B.1.177.570.000843
ORF1ab/nsp15A1-B65P65SCcaTca33B.1.2320.001612
ORF1ab/nsp15A1-B65P65SCcaTca33B.1.2340.000396
ORF1ab/nsp15A1-B65P65PccAccT23B.1.2340.000264
ORF1ab/nsp15A1-B65P65PccAccG13B.1.2340.000132
ORF1ab/nsp15A1-B65P65LcCacTa33B.1.2430.000209
ORF1ab/nsp15A1-B65P65PccAccG33B.1.3990.005803
ORF1ab/nsp15A1-B65P65SCcaTca33B.1.5950.000783
ORF1ab/nsp15A1-B65P65SCcaTca33P.1.40.00293
ORF1ab/nsp15A1-B65P65delCCA---220.111111
ORF1ab/nsp15A1-B65P65SCcaTca22A.10.000564
ORF1ab/nsp15A1-B65P65SCcaTca22A.23.10.001408
ORF1ab/nsp15A1-B65P65del1Cca-ca22All0
ORF1ab/nsp15A1-B65P65SCcaTca22AY.1000.000092
ORF1ab/nsp15A1-B65P65PccAccG12AY.1000.000046
ORF1ab/nsp15A1-B65P65PccAccT12AY.1000.000046
ORF1ab/nsp15A1-B65P65TCcaAca22AY.1020.000053
ORF1ab/nsp15A1-B65P65PccAccG22AY.1170.000169
ORF1ab/nsp15A1-B65P65LcCacTa22AY.1200.000074
ORF1ab/nsp15A1-B65P65SCcaTca22AY.140.000176
ORF1ab/nsp15A1-B65P65SCcaTca22AY.20.000712
ORF1ab/nsp15A1-B65P65SCcaTca22AY.230.000139
ORF1ab/nsp15A1-B65P65PccAccT22AY.230.000139
ORF1ab/nsp15A1-B65P65PccAccG22AY.250.000012
ORF1ab/nsp15A1-B65P65LcCacTa22AY.260.000057
ORF1ab/nsp15A1-B65P65PccAccT22AY.290.000032
ORF1ab/nsp15A1-B65P65TCcaAca22AY.30.00002
ORF1ab/nsp15A1-B65P65SCcaTca22AY.3.10.000171
ORF1ab/nsp15A1-B65P65LcCacTa22AY.340.000194
ORF1ab/nsp15A1-B65P65QcCacAa22AY.39.10.000079
ORF1ab/nsp15A1-B65P65LcCacTa22AY.4.20.000043
ORF1ab/nsp15A1-B65P65TCcaAca22AY.4.20.000043
ORF1ab/nsp15A1-B65P65SCcaTca22AY.4.40.000818
ORF1ab/nsp15A1-B65P65QcCacAa22AY.430.000009
ORF1ab/nsp15A1-B65P65delCCA---22AY.440.000012
ORF1ab/nsp15A1-B65P65SCcaTca22AY.46.10.002053
ORF1ab/nsp15A1-B65P65SCcaTca22AY.610.00021
ORF1ab/nsp15A1-B65P65LcCacTa22AY.630.000774
ORF1ab/nsp15A1-B65P65SCcaTca22AY.700.000417
ORF1ab/nsp15A1-B65P65LcCacTa22AY.740.000231
ORF1ab/nsp15A1-B65P65SCcaTca12AY.750.000056
ORF1ab/nsp15A1-B65P65SCcATcT12AY.750.000056
ORF1ab/nsp15A1-B65P65SCcaTca22AY.870.001665
ORF1ab/nsp15A1-B65P65SCcaTca22AY.980.000158
ORF1ab/nsp15A1-B65P65LcCacTa22B0.000256
ORF1ab/nsp15A1-B65P65delCCA---22B.1.10.000036
ORF1ab/nsp15A1-B65P65PccAccG22B.1.10.000036
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.1.1530.002191
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.1.370.000386
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.1.390.001019
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.1.4320.002532
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.1.5180.012658
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.1.630.000772
ORF1ab/nsp15A1-B65P65PccAccT22B.1.177.520.003515
ORF1ab/nsp15A1-B65P65LcCacTa22B.1.177.570.000562
ORF1ab/nsp15A1-B65P65delCCA---22B.1.20.000018
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.2140.007326
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.2890.005319
ORF1ab/nsp15A1-B65P65TCcaAca22B.1.3510.000059
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.36.10.002281
ORF1ab/nsp15A1-B65P65LcCacTa22B.1.36.170.000988
ORF1ab/nsp15A1-B65P65LcCacTa22B.1.36.270.001527
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.36.290.001035
ORF1ab/nsp15A1-B65P65PccAccT22B.1.4270.000101
ORF1ab/nsp15A1-B65P65PccAccT12B.1.4290.000024
ORF1ab/nsp15A1-B65P65PccAccG12B.1.4290.000024
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.5640.000852
ORF1ab/nsp15A1-B65P65SCcaTca22B.1.6090.000959
ORF1ab/nsp15A1-B65P65TCcaAca22B.1.617.20.000008
ORF1ab/nsp15A1-B65P65LcCacTa22B.60.00182
ORF1ab/nsp15A1-B65P65LcCacTa22B.610.011494
ORF1ab/nsp15A1-B65P65PccAccC22C.360.001821
ORF1ab/nsp15A1-B65P65PccAccG22C.370.000232
ORF1ab/nsp15A1-B65P65SCcaTca22C.380.016129
ORF1ab/nsp15A1-B65P65TCcaAca22D.20.00015
ORF1ab/nsp15A1-B65P65SCcaTca22P.1.140.000096
ORF1ab/nsp15A1-B65P65SCcaTca22Q.10.000253
ORF1ab/nsp15A1-B65P65QcCacAa11A0.000387
ORF1ab/nsp15A1-B65P65PccAccG11A.10.000282
ORF1ab/nsp15A1-B65P65CCCATGT11All0
ORF1ab/nsp15A1-B65P65RcCacGa11All0
ORF1ab/nsp15A1-B65P65KCCaAAa11All0
ORF1ab/nsp15A1-B65P65del2cCAc--11All0
ORF1ab/nsp15A1-B65P65ACcaGca11All0
ORF1ab/nsp15A1-B65P65SCcaTca11AY.10.000396
ORF1ab/nsp15A1-B65P65SCcaTca11AY.1040.001984
ORF1ab/nsp15A1-B65P65SCcaTca11AY.1070.000466
ORF1ab/nsp15A1-B65P65SCcaTca11AY.1090.00074
ORF1ab/nsp15A1-B65P65SCcaTca11AY.1100.000113
ORF1ab/nsp15A1-B65P65SCcaTca11AY.1110.000183
ORF1ab/nsp15A1-B65P65TCcaAca11AY.1160.000287
ORF1ab/nsp15A1-B65P65delCCA---11AY.1180.000063
ORF1ab/nsp15A1-B65P65SCcaTca11AY.130.000161
ORF1ab/nsp15A1-B65P65LcCacTa11AY.140.000088
ORF1ab/nsp15A1-B65P65PccAccT11AY.200.000039
ORF1ab/nsp15A1-B65P65SCcaTca11AY.23.10.000417
ORF1ab/nsp15A1-B65P65SCcaTca11AY.270.000065
ORF1ab/nsp15A1-B65P65SCcaTca11AY.29.10.000221
ORF1ab/nsp15A1-B65P65LcCacTa11AY.3.10.000085
ORF1ab/nsp15A1-B65P65SCcaTca11AY.320.000532
ORF1ab/nsp15A1-B65P65TCcaAca11AY.330.000067
ORF1ab/nsp15A1-B65P65SCcaTca11AY.34.10.00051
ORF1ab/nsp15A1-B65P65LcCacTa11AY.360.000148
ORF1ab/nsp15A1-B65P65PccAccG11AY.360.000148
ORF1ab/nsp15A1-B65P65PccAccG11AY.4.20.000022
ORF1ab/nsp15A1-B65P65SCcaTca11AY.4.2.10.000149
ORF1ab/nsp15A1-B65P65SCcaTca11AY.4.50.000107
ORF1ab/nsp15A1-B65P65LcCacTa11AY.420.00004
ORF1ab/nsp15A1-B65P65delCCA---11AY.430.000004
ORF1ab/nsp15A1-B65P65TCcaAca11AY.430.000004
ORF1ab/nsp15A1-B65P65LcCacTa11AY.450.000122
ORF1ab/nsp15A1-B65P65PccAccT11AY.46.60.000072
ORF1ab/nsp15A1-B65P65TCcaAca11AY.46.60.000072
ORF1ab/nsp15A1-B65P65LcCacTa11AY.490.003195
ORF1ab/nsp15A1-B65P65delCCA---11AY.5.30.000337
ORF1ab/nsp15A1-B65P65PccAccT11AY.5.30.000337
ORF1ab/nsp15A1-B65P65SCcaTca11AY.5.40.000277
ORF1ab/nsp15A1-B65P65LcCacTa11AY.500.000799
ORF1ab/nsp15A1-B65P65QcCacAa11AY.520.000814
ORF1ab/nsp15A1-B65P65SCcaTca11AY.520.000814
ORF1ab/nsp15A1-B65P65SCcaTca11AY.530.000288
ORF1ab/nsp15A1-B65P65SCcaTca11AY.540.000095
ORF1ab/nsp15A1-B65P65PccAccT11AY.570.000656
ORF1ab/nsp15A1-B65P65LcCacTa11AY.60.000041
ORF1ab/nsp15A1-B65P65delCCA---11AY.620.000436
ORF1ab/nsp15A1-B65P65SCcaTca11AY.680.000274
ORF1ab/nsp15A1-B65P65KCCaAAa11AY.690.000187
ORF1ab/nsp15A1-B65P65SCcaTca11AY.710.000475
ORF1ab/nsp15A1-B65P65LcCacTa11AY.730.000665
ORF1ab/nsp15A1-B65P65LcCacTa11AY.75.10.00018
ORF1ab/nsp15A1-B65P65SCcaTca11AY.760.004831
ORF1ab/nsp15A1-B65P65SCcaTca11AY.790.001211
ORF1ab/nsp15A1-B65P65LcCacTa11AY.790.001211
ORF1ab/nsp15A1-B65P65PccAccT11AY.820.001357
ORF1ab/nsp15A1-B65P65SCcaTca11AY.820.001357
ORF1ab/nsp15A1-B65P65LcCacTa11AY.850.000427
ORF1ab/nsp15A1-B65P65QcCacAa11AY.850.000427
ORF1ab/nsp15A1-B65P65LcCacTa11AY.90.000068
ORF1ab/nsp15A1-B65P65SCcaTca11AY.9.10.000084
ORF1ab/nsp15A1-B65P65LcCacTa11AY.9.20.000037
ORF1ab/nsp15A1-B65P65SCcaTca11AY.950.000761
ORF1ab/nsp15A1-B65P65LcCacTa11AY.950.000761
ORF1ab/nsp15A1-B65P65PccAccG11AY.980.000079
ORF1ab/nsp15A1-B65P65SCcaTca11AY.990.001049
ORF1ab/nsp15A1-B65P65PccAccT11AY.99.20.000092
ORF1ab/nsp15A1-B65P65QcCacAa11B0.000128
ORF1ab/nsp15A1-B65P65del1Cca-ca11B.1.10.000018
ORF1ab/nsp15A1-B65P65TCcaAca11B.1.10.000018
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.10.000018
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.1.1170.009709
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.1.1180.010204
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.1610.003534
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.1650.015385
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.2050.003717
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.2070.001182
ORF1ab/nsp15A1-B65P65PccAccT11B.1.1.2140.000055
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.2200.001859
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.1.280.000311
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.3060.000438
ORF1ab/nsp15A1-B65P65delCCA---11B.1.1.3150.008475
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.3180.000302
ORF1ab/nsp15A1-B65P65RcCacGa11B.1.1.3340.016393
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.1.3480.000796
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.4330.001425
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.4340.000349
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.4850.016667
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.500.000679
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.5150.02
ORF1ab/nsp15A1-B65P65PccAccG11B.1.1.5190.00004
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.5230.001563
ORF1ab/nsp15A1-B65P65PccAccC11B.1.1.5250.005464
ORF1ab/nsp15A1-B65P65ACcaGca11B.1.1.70.000001
ORF1ab/nsp15A1-B65P65del2cCAc--11B.1.1.70.000001
ORF1ab/nsp15A1-B65P65delCCA---11B.1.1.700.000341
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.1.700.000341
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.1.980.018519
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.1570.002985
ORF1ab/nsp15A1-B65P65delCCA---11B.1.1600.000031
ORF1ab/nsp15A1-B65P65PccAccG11B.1.177.120.000152
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.177.120.000152
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.177.180.00116
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.177.350.000691
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.177.530.002392
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.177.600.000218
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.177.630.002703
ORF1ab/nsp15A1-B65P65PccAccG11B.1.177.650.000665
ORF1ab/nsp15A1-B65P65delCCA---11B.1.177.730.000566
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.177.810.000189
ORF1ab/nsp15A1-B65P65delCCA---11B.1.177.830.001481
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.177.90.001332
ORF1ab/nsp15A1-B65P65TCcaAca11B.1.20.000009
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.2060.000816
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.220.001318
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.2200.01087
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.2220.001692
ORF1ab/nsp15A1-B65P65del1Cca-ca11B.1.2470.014925
ORF1ab/nsp15A1-B65P65delCCA---11B.1.2580.000067
ORF1ab/nsp15A1-B65P65QcCacAa11B.1.3010.005917
ORF1ab/nsp15A1-B65P65TCcaAca11B.1.3240.001605
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.3250.006897
ORF1ab/nsp15A1-B65P65PccAccT11B.1.3510.00003
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.351.30.000876
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.351.50.0006
ORF1ab/nsp15A1-B65P65PccAccT11B.1.360.000146
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.36.160.001425
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.36.170.000494
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.36.360.000602
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.36.80.001
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.3690.000285
ORF1ab/nsp15A1-B65P65PccAccG11B.1.3690.000285
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.3970.004854
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.3980.002976
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4010.008197
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4040.001302
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4220.000812
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4380.006536
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.438.10.000107
ORF1ab/nsp15A1-B65P65PccAccT11B.1.4520.013699
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4590.004082
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4680.005714
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.4920.007042
ORF1ab/nsp15A1-B65P65LcCacTa11B.1.5170.000427
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.5370.02
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.5460.003704
ORF1ab/nsp15A1-B65P65delCCA---11B.1.5610.000397
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.564.10.001577
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.5800.004065
ORF1ab/nsp15A1-B65P65delCCA---11B.1.5820.000491
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.5820.000491
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.5960.000087
ORF1ab/nsp15A1-B65P65delCCA---11B.1.617.20.000004
ORF1ab/nsp15A1-B65P65PccAccG11B.1.6190.000871
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.6200.000946
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.6230.000536
ORF1ab/nsp15A1-B65P65QcCacAa11B.1.6230.000536
ORF1ab/nsp15A1-B65P65delCCA---11B.1.6300.005236
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.6370.000073
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.780.008547
ORF1ab/nsp15A1-B65P65SCcaTca11B.1.88.10.004808
ORF1ab/nsp15A1-B65P65SCcaTca11B.400.000364
ORF1ab/nsp15A1-B65P65PccAccT11B.400.000364
ORF1ab/nsp15A1-B65P65PccAccT11B.550.00295
ORF1ab/nsp15A1-B65P65SCcaTca11B.6.80.008264
ORF1ab/nsp15A1-B65P65SCcaTca11C.140.004329
ORF1ab/nsp15A1-B65P65PccAccC11C.170.055556
ORF1ab/nsp15A1-B65P65PccAccT11C.36.30.000567
ORF1ab/nsp15A1-B65P65SCcaTca11C.370.000116
ORF1ab/nsp15A1-B65P65LcCacTa11P.10.000016
ORF1ab/nsp15A1-B65P65PccAccG11P.10.000016
ORF1ab/nsp15A1-B65P65CCCATGT11P.10.000016
ORF1ab/nsp15A1-B65P65delCCA---11P.10.000016
ORF1ab/nsp15A1-B65P65SCcaTca11P.1.120.000484
ORF1ab/nsp15A1-B65P65PccAccT11P.1.140.000048
ORF1ab/nsp15A1-B65P65delCCA---11P.1.150.000232
ORF1ab/nsp15A1-B65P65SCcaTca11P.1.70.000319
ORF1ab/nsp15A1-B65P65SCcaTca11P.20.000187
ORF1ab/nsp15A1-B65P65delCCA---11Q.80.000165
ORF1ab/nsp15A1-B65P65PccAccG11Q.80.000165
ORF1ab/nsp15A1-B65P65SCcaTca11S.10.00495