CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 334

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B334K334NK6786NnonsynaaAaaT116711320.97000920620-20622
ORF1ab/nsp15A1-B334K334NK6786NnonsynaaAaaC1167350.029991420620-20622
ORF1ab/nsp15A1-B334K334RK6786RnonsynaAaaGa8248230.99878620620-20622
ORF1ab/nsp15A1-B334K334RK6786RnonsynaAAaGG82410.0012135920620-20622
ORF1ab/nsp15A1-B334K334KK6786KsynaaAaaG153153120620-20622
ORF1ab/nsp15A1-B334K334EK6786EnonsynAaaGaa152152120620-20622
ORF1ab/nsp15A1-B334K334TK6786TnonsynaAaaCa7878120620-20622
ORF1ab/nsp15A1-B334K334delK6786deldelAAA---5959120620-20622
ORF1ab/nsp15A1-B334K334del1K6786del1delAaa-aa77120620-20622
ORF1ab/nsp15A1-B334K334XK6786XnonsynAaaTaa760.85714320620-20622
ORF1ab/nsp15A1-B334K334XK6786XnonsynAaATaG710.14285720620-20622
ORF1ab/nsp15A1-B334K334IK6786InonsynaAaaTa66120620-20622
ORF1ab/nsp15A1-B334K334LK6786LnonsynAAaTTa310.33333320620-20622
ORF1ab/nsp15A1-B334K334LK6786LnonsynAAACTC310.33333320620-20622
ORF1ab/nsp15A1-B334K334LK6786LnonsynAAATTG310.33333320620-20622
ORF1ab/nsp15A1-B334K334AK6786AnonsynAAaGCa210.520620-20622
ORF1ab/nsp15A1-B334K334AK6786AnonsynAAAGCC210.520620-20622
ORF1ab/nsp15A1-B334K334del2K6786del2delAAa--a11120620-20622
ORF1ab/nsp15A1-B334K334SK6786SnonsynaAAaGC11120620-20622
ORF1ab/nsp15A1-B334K334PK6786PnonsynAAACCG11120620-20622
ORF1ab/nsp15A1-B334K334QK6786QnonsynAaaCaa11120620-20622
ORF1ab/nsp15A1-B334K334MK6786MnonsynaAAaTG11120620-20622

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B334K334NaaAaaT11321167All0.000217
ORF1ab/nsp15A1-B334K334NaaAaaC351167All0.000007
ORF1ab/nsp15A1-B334K334NaaAaaT983983B.1.3890.98497
ORF1ab/nsp15A1-B334K334RaAaaGa823824All0.000157
ORF1ab/nsp15A1-B334K334RaAAaGG1824All0
ORF1ab/nsp15A1-B334K334RaAaaGa740740B.1.177.650.492349
ORF1ab/nsp15A1-B334K334KaaAaaG153153All0.000029
ORF1ab/nsp15A1-B334K334EAaaGaa152152All0.000029
ORF1ab/nsp15A1-B334K334NaaAaaT9698B.10.000879
ORF1ab/nsp15A1-B334K334NaaAaaC298B.10.000018
ORF1ab/nsp15A1-B334K334TaAaaCa7878All0.000015
ORF1ab/nsp15A1-B334K334TaAaaCa6969AY.440.00042
ORF1ab/nsp15A1-B334K334EAaaGaa6060B.1.6210.005311
ORF1ab/nsp15A1-B334K334delAAA---5959All0.000011
ORF1ab/nsp15A1-B334K334KaaAaaG4747AY.1200.001747
ORF1ab/nsp15A1-B334K334NaaAaaT3636AY.390.00089
ORF1ab/nsp15A1-B334K334KaaAaaG2222B.1.1.70.00002
ORF1ab/nsp15A1-B334K334RaAaaGa2121B.1.1.70.000019
ORF1ab/nsp15A1-B334K334EAaaGaa1919AY.60.000781
ORF1ab/nsp15A1-B334K334delAAA---1717B.1.1.70.000015
ORF1ab/nsp15A1-B334K334EAaaGaa1717B.1.1.70.000015
ORF1ab/nsp15A1-B334K334RaAaaGa1717B.1.1770.000224
ORF1ab/nsp15A1-B334K334NaaAaaC1516B.1.1.70.000013
ORF1ab/nsp15A1-B334K334NaaAaaT116B.1.1.70.000001
ORF1ab/nsp15A1-B334K334KaaAaaG1515AY.30.000149
ORF1ab/nsp15A1-B334K334KaaAaaG1515B.1.20.000132
ORF1ab/nsp15A1-B334K334delAAA---880.444444
ORF1ab/nsp15A1-B334K334KaaAaaG88B.1.1.370.001543
ORF1ab/nsp15A1-B334K334del1Aaa-aa77All0.000001
ORF1ab/nsp15A1-B334K334XAaaTaa67All0.000001
ORF1ab/nsp15A1-B334K334XAaATaG17All0
ORF1ab/nsp15A1-B334K334NaaAaaC77AY.1110.001282
ORF1ab/nsp15A1-B334K334NaaAaaT77B.1.1770.000092
ORF1ab/nsp15A1-B334K334IaAaaTa66All0.000001
ORF1ab/nsp15A1-B334K334EAaaGaa66AY.1030.000037
ORF1ab/nsp15A1-B334K334EAaaGaa66C.370.000696
ORF1ab/nsp15A1-B334K334RaAaaGa55AY.40.000008
ORF1ab/nsp15A1-B334K334EAaaGaa55AY.40.000008
ORF1ab/nsp15A1-B334K334KaaAaaG55B.1.1.1410.01006
ORF1ab/nsp15A1-B334K334EAaaGaa55B.1.617.20.000019
ORF1ab/nsp15A1-B334K334KaaAaaG55B.1.617.20.000019
ORF1ab/nsp15A1-B334K334TaAaaCa44AY.1070.001864
ORF1ab/nsp15A1-B334K334NaaAaaT34AY.40.000005
ORF1ab/nsp15A1-B334K334NaaAaaC14AY.40.000002
ORF1ab/nsp15A1-B334K334EAaaGaa44B.10.000037
ORF1ab/nsp15A1-B334K334RaAaaGa44B.1.2580.000266
ORF1ab/nsp15A1-B334K334delAAA---44B.1.617.20.000015
ORF1ab/nsp15A1-B334K334LAAACTC13All0
ORF1ab/nsp15A1-B334K334LAAaTTa13All0
ORF1ab/nsp15A1-B334K334LAAATTG13All0
ORF1ab/nsp15A1-B334K334KaaAaaG33AY.1170.000254
ORF1ab/nsp15A1-B334K334KaaAaaG33AY.40.000005
ORF1ab/nsp15A1-B334K334NaaAaaC23AY.430.000009
ORF1ab/nsp15A1-B334K334NaaAaaT13AY.430.000004
ORF1ab/nsp15A1-B334K334KaaAaaG33AY.560.004815
ORF1ab/nsp15A1-B334K334EAaaGaa33AY.80.001818
ORF1ab/nsp15A1-B334K334EAaaGaa33B.1.1770.00004
ORF1ab/nsp15A1-B334K334RaAaaGa33B.1.177.40.000633
ORF1ab/nsp15A1-B334K334delAAA---33B.1.20.000026
ORF1ab/nsp15A1-B334K334EAaaGaa33B.1.20.000026
ORF1ab/nsp15A1-B334K334RaAaaGa33B.1.617.20.000011
ORF1ab/nsp15A1-B334K334XAaaTaa23B.1.617.20.000008
ORF1ab/nsp15A1-B334K334XAaATaG13B.1.617.20.000004
ORF1ab/nsp15A1-B334K334KaaAaaG33P.10.000047
ORF1ab/nsp15A1-B334K334AAAAGCC12All0
ORF1ab/nsp15A1-B334K334AAAaGCa12All0
ORF1ab/nsp15A1-B334K334AAAaGCa12AY.1130.000142
ORF1ab/nsp15A1-B334K334AAAAGCC12AY.1130.000142
ORF1ab/nsp15A1-B334K334RaAaaGa22AY.1170.000169
ORF1ab/nsp15A1-B334K334RaAaaGa22AY.250.000012
ORF1ab/nsp15A1-B334K334NaaAaaC22AY.250.000012
ORF1ab/nsp15A1-B334K334KaaAaaG22AY.250.000012
ORF1ab/nsp15A1-B334K334EAaaGaa22AY.39.10.000079
ORF1ab/nsp15A1-B334K334delAAA---22AY.40.000003
ORF1ab/nsp15A1-B334K334RaAaaGa22AY.430.000009
ORF1ab/nsp15A1-B334K334del1Aaa-aa22AY.440.000012
ORF1ab/nsp15A1-B334K334KaaAaaG22AY.440.000012
ORF1ab/nsp15A1-B334K334RaAaaGa12AY.440.000006
ORF1ab/nsp15A1-B334K334RaAAaGG12AY.440.000006
ORF1ab/nsp15A1-B334K334KaaAaaG22AY.9.20.000073
ORF1ab/nsp15A1-B334K334RaAaaGa22B.10.000018
ORF1ab/nsp15A1-B334K334RaAaaGa22B.1.1.5190.000079
ORF1ab/nsp15A1-B334K334delAAA---22B.1.1.700.000682
ORF1ab/nsp15A1-B334K334RaAaaGa22B.1.177.760.004988
ORF1ab/nsp15A1-B334K334RaAaaGa22B.1.20.000018
ORF1ab/nsp15A1-B334K334delAAA---22B.1.2580.000133
ORF1ab/nsp15A1-B334K334EAaaGaa22B.1.360.000292
ORF1ab/nsp15A1-B334K334RaAaaGa22B.1.4290.000047
ORF1ab/nsp15A1-B334K334TaAaaCa22B.1.617.20.000008
ORF1ab/nsp15A1-B334K334NaaAaaT12B.1.617.20.000004
ORF1ab/nsp15A1-B334K334LAAaTTa12B.1.617.20.000004
ORF1ab/nsp15A1-B334K334LAAATTG12B.1.617.20.000004
ORF1ab/nsp15A1-B334K334NaaAaaC12B.1.617.20.000004
ORF1ab/nsp15A1-B334K334RaAaaGa22Z.10.00578
ORF1ab/nsp15A1-B334K334KaaAaaG11A.20.000662
ORF1ab/nsp15A1-B334K334EAaaGaa11A.20.000662
ORF1ab/nsp15A1-B334K334EAaaGaa11A.2.50.000499
ORF1ab/nsp15A1-B334K334KaaAaaG11A.23.10.000704
ORF1ab/nsp15A1-B334K334TaAaaCa11AD.20.000219
ORF1ab/nsp15A1-B334K334PAAACCG11All0
ORF1ab/nsp15A1-B334K334SaAAaGC11All0
ORF1ab/nsp15A1-B334K334MaAAaTG11All0
ORF1ab/nsp15A1-B334K334QAaaCaa11All0
ORF1ab/nsp15A1-B334K334del2AAa--a11All0
ORF1ab/nsp15A1-B334K334NaaAaaC11AY.1000.000046
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.1020.000027
ORF1ab/nsp15A1-B334K334KaaAaaG11AY.1030.000006
ORF1ab/nsp15A1-B334K334RaAaaGa11AY.1030.000006
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.1090.00074
ORF1ab/nsp15A1-B334K334NaaAaaC11AY.1130.000142
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.1140.000231
ORF1ab/nsp15A1-B334K334RaAaaGa11AY.1180.000063
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.1190.000035
ORF1ab/nsp15A1-B334K334XAaaTaa11AY.120.10.000321
ORF1ab/nsp15A1-B334K334del1Aaa-aa11AY.1210.000135
ORF1ab/nsp15A1-B334K334delAAA---11AY.250.000006
ORF1ab/nsp15A1-B334K334del1Aaa-aa11AY.260.000028
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.260.000028
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.270.000065
ORF1ab/nsp15A1-B334K334RaAaaGa11AY.290.000016
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.30.00001
ORF1ab/nsp15A1-B334K334delAAA---11AY.30.00001
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.360.000148
ORF1ab/nsp15A1-B334K334delAAA---11AY.4.50.000107
ORF1ab/nsp15A1-B334K334RaAaaGa11AY.4.50.000107
ORF1ab/nsp15A1-B334K334RaAaaGa11AY.420.00004
ORF1ab/nsp15A1-B334K334KaaAaaG11AY.430.000004
ORF1ab/nsp15A1-B334K334delAAA---11AY.430.000004
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.440.000006
ORF1ab/nsp15A1-B334K334NaaAaaC11AY.440.000006
ORF1ab/nsp15A1-B334K334delAAA---11AY.440.000006
ORF1ab/nsp15A1-B334K334QAaaCaa11AY.440.000006
ORF1ab/nsp15A1-B334K334IaAaaTa11AY.470.000031
ORF1ab/nsp15A1-B334K334KaaAaaG11AY.50.000021
ORF1ab/nsp15A1-B334K334KaaAaaG11AY.730.000665
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.740.000116
ORF1ab/nsp15A1-B334K334EAaaGaa11AY.750.000056
ORF1ab/nsp15A1-B334K334delAAA---11AY.840.000437
ORF1ab/nsp15A1-B334K334delAAA---11AY.9.20.000037
ORF1ab/nsp15A1-B334K334IaAaaTa11AY.9.20.000037
ORF1ab/nsp15A1-B334K334delAAA---11AY.990.001049
ORF1ab/nsp15A1-B334K334delAAA---11AY.99.10.001553
ORF1ab/nsp15A1-B334K334PAAACCG11B.10.000009
ORF1ab/nsp15A1-B334K334KaaAaaG11B.10.000009
ORF1ab/nsp15A1-B334K334EAaaGaa11B.1.10.000018
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.10.000018
ORF1ab/nsp15A1-B334K334IaAaaTa11B.1.10.000018
ORF1ab/nsp15A1-B334K334delAAA---11B.1.10.000018
ORF1ab/nsp15A1-B334K334NaaAaaC11B.1.10.000018
ORF1ab/nsp15A1-B334K334NaaAaaT11B.1.1.1010.01
ORF1ab/nsp15A1-B334K334RaAaaGa11B.1.1.2410.00207
ORF1ab/nsp15A1-B334K334delAAA---11B.1.1.3110.000358
ORF1ab/nsp15A1-B334K334EAaaGaa11B.1.1.330.000421
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.1.3680.003086
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.1.4480.002033
ORF1ab/nsp15A1-B334K334del1Aaa-aa11B.1.1.70.000001
ORF1ab/nsp15A1-B334K334TaAaaCa11B.1.1.70.000001
ORF1ab/nsp15A1-B334K334LAAACTC11B.1.1460.004237
ORF1ab/nsp15A1-B334K334NaaAaaT11B.1.1600.000031
ORF1ab/nsp15A1-B334K334XAaaTaa11B.1.160.120.00641
ORF1ab/nsp15A1-B334K334XAaaTaa11B.1.160.160.000929
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.1770.000013
ORF1ab/nsp15A1-B334K334delAAA---11B.1.1770.000013
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.177.210.000076
ORF1ab/nsp15A1-B334K334RaAaaGa11B.1.177.210.000076
ORF1ab/nsp15A1-B334K334IaAaaTa11B.1.177.420.000894
ORF1ab/nsp15A1-B334K334RaAaaGa11B.1.177.70.000165
ORF1ab/nsp15A1-B334K334delAAA---11B.1.177.730.000566
ORF1ab/nsp15A1-B334K334delAAA---11B.1.177.830.001481
ORF1ab/nsp15A1-B334K334RaAaaGa11B.1.1820.007246
ORF1ab/nsp15A1-B334K334TaAaaCa11B.1.20.000009
ORF1ab/nsp15A1-B334K334IaAaaTa11B.1.20.000009
ORF1ab/nsp15A1-B334K334RaAaaGa11B.1.3510.00003
ORF1ab/nsp15A1-B334K334RaAaaGa11B.1.360.000146
ORF1ab/nsp15A1-B334K334NaaAaaT11B.1.36.390.002217
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.5040.03125
ORF1ab/nsp15A1-B334K334delAAA---11B.1.5250.000113
ORF1ab/nsp15A1-B334K334delAAA---11B.1.5260.000024
ORF1ab/nsp15A1-B334K334delAAA---11B.1.5610.000397
ORF1ab/nsp15A1-B334K334del2AAa--a11B.1.5800.004065
ORF1ab/nsp15A1-B334K334XAaaTaa11B.1.5960.000087
ORF1ab/nsp15A1-B334K334NaaAaaT11B.1.5960.000087
ORF1ab/nsp15A1-B334K334IaAaaTa11B.1.617.20.000004
ORF1ab/nsp15A1-B334K334del1Aaa-aa11B.1.617.20.000004
ORF1ab/nsp15A1-B334K334MaAAaTG11B.1.617.20.000004
ORF1ab/nsp15A1-B334K334delAAA---11B.1.6200.000946
ORF1ab/nsp15A1-B334K334KaaAaaG11B.1.6210.000089
ORF1ab/nsp15A1-B334K334del1Aaa-aa11B.1.930.000934
ORF1ab/nsp15A1-B334K334NaaAaaC11C.370.000116
ORF1ab/nsp15A1-B334K334EAaaGaa11D.20.000075
ORF1ab/nsp15A1-B334K334SaAAaGC11P.10.000016
ORF1ab/nsp15A1-B334K334KaaAaaG11P.1.110.010204
ORF1ab/nsp15A1-B334K334KaaAaaG11P.1.120.000484
ORF1ab/nsp15A1-B334K334EAaaGaa11P.1.140.000048
ORF1ab/nsp15A1-B334K334delAAA---11P.1.150.000232
ORF1ab/nsp15A1-B334K334delAAA---11P.1.70.000319
ORF1ab/nsp15A1-B334K334KaaAaaG11P.1.70.000319
ORF1ab/nsp15A1-B334K334KaaAaaG11P.20.000187
ORF1ab/nsp15A1-B334K334delAAA---11Q.80.000165