CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 334

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp15A1-B	334	K334N	K6786N	nonsyn	aaA	aaT	1167	1132	0.970009	20620-20622
ORF1ab/nsp15A1-B	334	K334N	K6786N	nonsyn	aaA	aaC	1167	35	0.0299914	20620-20622
ORF1ab/nsp15A1-B	334	K334R	K6786R	nonsyn	aAa	aGa	824	823	0.998786	20620-20622
ORF1ab/nsp15A1-B	334	K334R	K6786R	nonsyn	aAA	aGG	824	1	0.00121359	20620-20622
ORF1ab/nsp15A1-B	334	K334K	K6786K	syn	aaA	aaG	153	153	1	20620-20622
ORF1ab/nsp15A1-B	334	K334E	K6786E	nonsyn	Aaa	Gaa	152	152	1	20620-20622
ORF1ab/nsp15A1-B	334	K334T	K6786T	nonsyn	aAa	aCa	78	78	1	20620-20622
ORF1ab/nsp15A1-B	334	K334del	K6786del	del	AAA	---	59	59	1	20620-20622
ORF1ab/nsp15A1-B	334	K334del1	K6786del1	del	Aaa	-aa	7	7	1	20620-20622
ORF1ab/nsp15A1-B	334	K334X	K6786X	nonsyn	Aaa	Taa	7	6	0.857143	20620-20622
ORF1ab/nsp15A1-B	334	K334X	K6786X	nonsyn	AaA	TaG	7	1	0.142857	20620-20622
ORF1ab/nsp15A1-B	334	K334I	K6786I	nonsyn	aAa	aTa	6	6	1	20620-20622
ORF1ab/nsp15A1-B	334	K334L	K6786L	nonsyn	AAa	TTa	3	1	0.333333	20620-20622
ORF1ab/nsp15A1-B	334	K334L	K6786L	nonsyn	AAA	CTC	3	1	0.333333	20620-20622
ORF1ab/nsp15A1-B	334	K334L	K6786L	nonsyn	AAA	TTG	3	1	0.333333	20620-20622
ORF1ab/nsp15A1-B	334	K334A	K6786A	nonsyn	AAa	GCa	2	1	0.5	20620-20622
ORF1ab/nsp15A1-B	334	K334A	K6786A	nonsyn	AAA	GCC	2	1	0.5	20620-20622
ORF1ab/nsp15A1-B	334	K334del2	K6786del2	del	AAa	--a	1	1	1	20620-20622
ORF1ab/nsp15A1-B	334	K334S	K6786S	nonsyn	aAA	aGC	1	1	1	20620-20622
ORF1ab/nsp15A1-B	334	K334P	K6786P	nonsyn	AAA	CCG	1	1	1	20620-20622
ORF1ab/nsp15A1-B	334	K334Q	K6786Q	nonsyn	Aaa	Caa	1	1	1	20620-20622
ORF1ab/nsp15A1-B	334	K334M	K6786M	nonsyn	aAA	aTG	1	1	1	20620-20622

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1132	1167	All	0.000217
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	35	1167	All	0.000007
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	983	983	B.1.389	0.98497
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	823	824	All	0.000157
ORF1ab/nsp15A1-B	334	K334R	aAA	aGG	1	824	All	0
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	740	740	B.1.177.65	0.492349
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	153	153	All	0.000029
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	152	152	All	0.000029
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	96	98	B.1	0.000879
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	2	98	B.1	0.000018
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	78	78	All	0.000015
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	69	69	AY.44	0.00042
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	60	60	B.1.621	0.005311
ORF1ab/nsp15A1-B	334	K334del	AAA	---	59	59	All	0.000011
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	47	47	AY.120	0.001747
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	36	36	AY.39	0.00089
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	22	22	B.1.1.7	0.00002
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	21	21	B.1.1.7	0.000019
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	19	19	AY.6	0.000781
ORF1ab/nsp15A1-B	334	K334del	AAA	---	17	17	B.1.1.7	0.000015
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	17	17	B.1.1.7	0.000015
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	17	17	B.1.177	0.000224
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	15	16	B.1.1.7	0.000013
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	16	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	15	15	AY.3	0.000149
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	15	15	B.1.2	0.000132
ORF1ab/nsp15A1-B	334	K334del	AAA	---	8	8		0.444444
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	8	8	B.1.1.37	0.001543
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	7	7	All	0.000001
ORF1ab/nsp15A1-B	334	K334X	Aaa	Taa	6	7	All	0.000001
ORF1ab/nsp15A1-B	334	K334X	AaA	TaG	1	7	All	0
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	7	7	AY.111	0.001282
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	7	7	B.1.177	0.000092
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	6	6	All	0.000001
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	6	6	AY.103	0.000037
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	6	6	C.37	0.000696
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	5	5	AY.4	0.000008
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	5	5	AY.4	0.000008
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	5	5	B.1.1.141	0.01006
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	5	5	B.1.617.2	0.000019
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	5	5	B.1.617.2	0.000019
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	4	4	AY.107	0.001864
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	3	4	AY.4	0.000005
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	4	AY.4	0.000002
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	4	4	B.1	0.000037
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	4	4	B.1.258	0.000266
ORF1ab/nsp15A1-B	334	K334del	AAA	---	4	4	B.1.617.2	0.000015
ORF1ab/nsp15A1-B	334	K334L	AAA	CTC	1	3	All	0
ORF1ab/nsp15A1-B	334	K334L	AAa	TTa	1	3	All	0
ORF1ab/nsp15A1-B	334	K334L	AAA	TTG	1	3	All	0
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	3	3	AY.117	0.000254
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	3	3	AY.4	0.000005
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	2	3	AY.43	0.000009
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	3	AY.43	0.000004
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	3	3	AY.56	0.004815
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	3	3	AY.8	0.001818
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	3	3	B.1.177	0.00004
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	3	3	B.1.177.4	0.000633
ORF1ab/nsp15A1-B	334	K334del	AAA	---	3	3	B.1.2	0.000026
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	3	3	B.1.2	0.000026
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	3	3	B.1.617.2	0.000011
ORF1ab/nsp15A1-B	334	K334X	Aaa	Taa	2	3	B.1.617.2	0.000008
ORF1ab/nsp15A1-B	334	K334X	AaA	TaG	1	3	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	3	3	P.1	0.000047
ORF1ab/nsp15A1-B	334	K334A	AAA	GCC	1	2	All	0
ORF1ab/nsp15A1-B	334	K334A	AAa	GCa	1	2	All	0
ORF1ab/nsp15A1-B	334	K334A	AAa	GCa	1	2	AY.113	0.000142
ORF1ab/nsp15A1-B	334	K334A	AAA	GCC	1	2	AY.113	0.000142
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	AY.117	0.000169
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	AY.25	0.000012
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	2	2	AY.25	0.000012
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	2	2	AY.25	0.000012
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	2	2	AY.39.1	0.000079
ORF1ab/nsp15A1-B	334	K334del	AAA	---	2	2	AY.4	0.000003
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	AY.43	0.000009
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	2	2	AY.44	0.000012
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	2	2	AY.44	0.000012
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	2	AY.44	0.000006
ORF1ab/nsp15A1-B	334	K334R	aAA	aGG	1	2	AY.44	0.000006
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	2	2	AY.9.2	0.000073
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	B.1	0.000018
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	B.1.1.519	0.000079
ORF1ab/nsp15A1-B	334	K334del	AAA	---	2	2	B.1.1.70	0.000682
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	B.1.177.76	0.004988
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	B.1.2	0.000018
ORF1ab/nsp15A1-B	334	K334del	AAA	---	2	2	B.1.258	0.000133
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	2	2	B.1.36	0.000292
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	B.1.429	0.000047
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	2	2	B.1.617.2	0.000008
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	2	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334L	AAa	TTa	1	2	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334L	AAA	TTG	1	2	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	2	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	2	2	Z.1	0.00578
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	A.2	0.000662
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	A.2	0.000662
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	A.2.5	0.000499
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	A.23.1	0.000704
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	1	1	AD.2	0.000219
ORF1ab/nsp15A1-B	334	K334P	AAA	CCG	1	1	All	0
ORF1ab/nsp15A1-B	334	K334S	aAA	aGC	1	1	All	0
ORF1ab/nsp15A1-B	334	K334M	aAA	aTG	1	1	All	0
ORF1ab/nsp15A1-B	334	K334Q	Aaa	Caa	1	1	All	0
ORF1ab/nsp15A1-B	334	K334del2	AAa	--a	1	1	All	0
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	1	AY.100	0.000046
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.102	0.000027
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	AY.103	0.000006
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	AY.103	0.000006
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.109	0.00074
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	1	AY.113	0.000142
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.114	0.000231
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	AY.118	0.000063
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.119	0.000035
ORF1ab/nsp15A1-B	334	K334X	Aaa	Taa	1	1	AY.120.1	0.000321
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	1	1	AY.121	0.000135
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.25	0.000006
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	1	1	AY.26	0.000028
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.26	0.000028
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.27	0.000065
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	AY.29	0.000016
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.3	0.00001
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.3	0.00001
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.36	0.000148
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.4.5	0.000107
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	AY.4.5	0.000107
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	AY.42	0.00004
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	AY.43	0.000004
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.43	0.000004
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.44	0.000006
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	1	AY.44	0.000006
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.44	0.000006
ORF1ab/nsp15A1-B	334	K334Q	Aaa	Caa	1	1	AY.44	0.000006
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	1	1	AY.47	0.000031
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	AY.5	0.000021
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	AY.73	0.000665
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.74	0.000116
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	AY.75	0.000056
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.84	0.000437
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.9.2	0.000037
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	1	1	AY.9.2	0.000037
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.99	0.001049
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	AY.99.1	0.001553
ORF1ab/nsp15A1-B	334	K334P	AAA	CCG	1	1	B.1	0.000009
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1	0.000009
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	B.1.1	0.000018
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.1	0.000018
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	1	1	B.1.1	0.000018
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.1	0.000018
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	1	B.1.1	0.000018
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	1	B.1.1.101	0.01
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	B.1.1.241	0.00207
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.1.311	0.000358
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	B.1.1.33	0.000421
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.1.368	0.003086
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.1.448	0.002033
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	1	1	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	1	1	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	334	K334L	AAA	CTC	1	1	B.1.146	0.004237
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	1	B.1.160	0.000031
ORF1ab/nsp15A1-B	334	K334X	Aaa	Taa	1	1	B.1.160.12	0.00641
ORF1ab/nsp15A1-B	334	K334X	Aaa	Taa	1	1	B.1.160.16	0.000929
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.177	0.000013
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.177	0.000013
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.177.21	0.000076
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	B.1.177.21	0.000076
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	1	1	B.1.177.42	0.000894
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	B.1.177.7	0.000165
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.177.73	0.000566
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.177.83	0.001481
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	B.1.182	0.007246
ORF1ab/nsp15A1-B	334	K334T	aAa	aCa	1	1	B.1.2	0.000009
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	1	1	B.1.2	0.000009
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	B.1.351	0.00003
ORF1ab/nsp15A1-B	334	K334R	aAa	aGa	1	1	B.1.36	0.000146
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	1	B.1.36.39	0.002217
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.504	0.03125
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.525	0.000113
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.526	0.000024
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.561	0.000397
ORF1ab/nsp15A1-B	334	K334del2	AAa	--a	1	1	B.1.580	0.004065
ORF1ab/nsp15A1-B	334	K334X	Aaa	Taa	1	1	B.1.596	0.000087
ORF1ab/nsp15A1-B	334	K334N	aaA	aaT	1	1	B.1.596	0.000087
ORF1ab/nsp15A1-B	334	K334I	aAa	aTa	1	1	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	1	1	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334M	aAA	aTG	1	1	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	B.1.620	0.000946
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	B.1.621	0.000089
ORF1ab/nsp15A1-B	334	K334del1	Aaa	-aa	1	1	B.1.93	0.000934
ORF1ab/nsp15A1-B	334	K334N	aaA	aaC	1	1	C.37	0.000116
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	D.2	0.000075
ORF1ab/nsp15A1-B	334	K334S	aAA	aGC	1	1	P.1	0.000016
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	P.1.11	0.010204
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	P.1.12	0.000484
ORF1ab/nsp15A1-B	334	K334E	Aaa	Gaa	1	1	P.1.14	0.000048
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	P.1.15	0.000232
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	P.1.7	0.000319
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	P.1.7	0.000319
ORF1ab/nsp15A1-B	334	K334K	aaA	aaG	1	1	P.2	0.000187
ORF1ab/nsp15A1-B	334	K334del	AAA	---	1	1	Q.8	0.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.