CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 327

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B327I327LI6779LnonsynAttCtt822822120599-20601
ORF1ab/nsp15A1-B327I327TI6779TnonsynaTtaCt501501120599-20601
ORF1ab/nsp15A1-B327I327VI6779VnonsynAttGtt334334120599-20601
ORF1ab/nsp15A1-B327I327II6779IsynatTatC1291260.97674420599-20601
ORF1ab/nsp15A1-B327I327II6779IsynatTatA12930.023255820599-20601
ORF1ab/nsp15A1-B327I327delI6779deldelATT---8787120599-20601
ORF1ab/nsp15A1-B327I327SI6779SnonsynaTtaGt5858120599-20601
ORF1ab/nsp15A1-B327I327NI6779NnonsynaTtaAt4343120599-20601
ORF1ab/nsp15A1-B327I327MI6779MnonsynatTatG2121120599-20601
ORF1ab/nsp15A1-B327I327del1I6779del1delaTta-t840.520599-20601
ORF1ab/nsp15A1-B327I327del1I6779del1delAtt-tt820.2520599-20601
ORF1ab/nsp15A1-B327I327del1I6779del1delAtT-tG810.12520599-20601
ORF1ab/nsp15A1-B327I327del1I6779del1delAtT-tW810.12520599-20601
ORF1ab/nsp15A1-B327I327FI6779FnonsynAttTtt44120599-20601
ORF1ab/nsp15A1-B327I327AI6779AnonsynATtGCt22120599-20601

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B327I327LAttCtt822822All0.000157
ORF1ab/nsp15A1-B327I327LAttCtt739739W.40.998649
ORF1ab/nsp15A1-B327I327TaTtaCt501501All0.000096
ORF1ab/nsp15A1-B327I327VAttGtt334334All0.000064
ORF1ab/nsp15A1-B327I327TaTtaCt156156B.1.258.170.01622
ORF1ab/nsp15A1-B327I327IatTatC126129All0.000024
ORF1ab/nsp15A1-B327I327IatTatA3129All0.000001
ORF1ab/nsp15A1-B327I327VAttGtt129129R.10.011611
ORF1ab/nsp15A1-B327I327delATT---8787All0.000017
ORF1ab/nsp15A1-B327I327TaTtaCt7474B.1.1.70.000066
ORF1ab/nsp15A1-B327I327SaTtaGt5858All0.000011
ORF1ab/nsp15A1-B327I327TaTtaCt4646B.1.1.2220.009384
ORF1ab/nsp15A1-B327I327VAttGtt4444B.10.000403
ORF1ab/nsp15A1-B327I327SaTtaGt4444B.1.1.70.000039
ORF1ab/nsp15A1-B327I327NaTtaAt4343All0.000008
ORF1ab/nsp15A1-B327I327VAttGtt4040B.1.617.20.000151
ORF1ab/nsp15A1-B327I327TaTtaCt3333AY.40.000051
ORF1ab/nsp15A1-B327I327TaTtaCt3333B.1.1770.000435
ORF1ab/nsp15A1-B327I327IatTatC3030AY.4.50.003225
ORF1ab/nsp15A1-B327I327delATT---2828B.1.1.70.000025
ORF1ab/nsp15A1-B327I327TaTtaCt2727AY.1190.000953
ORF1ab/nsp15A1-B327I327VAttGtt2525B.1.1.70.000022
ORF1ab/nsp15A1-B327I327NaTtaAt2525B.1.177.770.018155
ORF1ab/nsp15A1-B327I327VAttGtt2424AY.40.000037
ORF1ab/nsp15A1-B327I327TaTtaCt2323AL.10.298701
ORF1ab/nsp15A1-B327I327IatTatC2222AY.40.000034
ORF1ab/nsp15A1-B327I327MatTatG2121All0.000004
ORF1ab/nsp15A1-B327I327LAttCtt2121AY.250.000126
ORF1ab/nsp15A1-B327I327TaTtaCt1717B.1.1.1740.057432
ORF1ab/nsp15A1-B327I327IatTatC1717B.1.1600.00053
ORF1ab/nsp15A1-B327I327IatTatC1415B.1.1.70.000013
ORF1ab/nsp15A1-B327I327IatTatA115B.1.1.70.000001
ORF1ab/nsp15A1-B327I327LAttCtt1212B.1.617.20.000045
ORF1ab/nsp15A1-B327I327LAttCtt1111AY.270.000712
ORF1ab/nsp15A1-B327I327MatTatG1111AY.440.000067
ORF1ab/nsp15A1-B327I327VAttGtt1010P.10.000158
ORF1ab/nsp15A1-B327I327delATT---880.444444
ORF1ab/nsp15A1-B327I327del1aTta-t48All0.000001
ORF1ab/nsp15A1-B327I327del1Att-tt28All0
ORF1ab/nsp15A1-B327I327del1AtT-tG18All0
ORF1ab/nsp15A1-B327I327del1AtT-tW18All0
ORF1ab/nsp15A1-B327I327TaTtaCt88B.1.177.810.001515
ORF1ab/nsp15A1-B327I327TaTtaCt88B.1.20.00007
ORF1ab/nsp15A1-B327I327TaTtaCt77AY.1030.000043
ORF1ab/nsp15A1-B327I327TaTtaCt77B.1.617.20.000026
ORF1ab/nsp15A1-B327I327NaTtaAt66AY.40.000009
ORF1ab/nsp15A1-B327I327VAttGtt66AY.9.20.00022
ORF1ab/nsp15A1-B327I327LAttCtt66B.10.000055
ORF1ab/nsp15A1-B327I327VAttGtt66B.1.20.000053
ORF1ab/nsp15A1-B327I327TaTtaCt55AY.200.000194
ORF1ab/nsp15A1-B327I327TaTtaCt55AY.450.000608
ORF1ab/nsp15A1-B327I327TaTtaCt55B.10.000046
ORF1ab/nsp15A1-B327I327VAttGtt55B.1.4270.000252
ORF1ab/nsp15A1-B327I327IatTatC55B.1.617.20.000019
ORF1ab/nsp15A1-B327I327VAttGtt55B.1.6210.000443
ORF1ab/nsp15A1-B327I327delATT---55C.10.011962
ORF1ab/nsp15A1-B327I327FAttTtt44All0.000001
ORF1ab/nsp15A1-B327I327VAttGtt44AY.250.000024
ORF1ab/nsp15A1-B327I327SaTtaGt44AY.30.00004
ORF1ab/nsp15A1-B327I327delATT---44AY.40.000006
ORF1ab/nsp15A1-B327I327LAttCtt44AY.40.000006
ORF1ab/nsp15A1-B327I327LAttCtt44AY.440.000024
ORF1ab/nsp15A1-B327I327delATT---44B.1.10.000073
ORF1ab/nsp15A1-B327I327LAttCtt44B.1.1.70.000004
ORF1ab/nsp15A1-B327I327IatTatC34B.1.20.000026
ORF1ab/nsp15A1-B327I327IatTatA14B.1.20.000009
ORF1ab/nsp15A1-B327I327IatTatC44P.20.000747
ORF1ab/nsp15A1-B327I327TaTtaCt33AY.120.000948
ORF1ab/nsp15A1-B327I327TaTtaCt33AY.250.000018
ORF1ab/nsp15A1-B327I327VAttGtt33AY.290.000047
ORF1ab/nsp15A1-B327I327TaTtaCt33AY.30.00003
ORF1ab/nsp15A1-B327I327delATT---33B.1.1.4480.006098
ORF1ab/nsp15A1-B327I327IatTatC33B.1.1.4640.004418
ORF1ab/nsp15A1-B327I327MatTatG33B.1.1.70.000003
ORF1ab/nsp15A1-B327I327VAttGtt33B.1.1770.00004
ORF1ab/nsp15A1-B327I327LAttCtt33B.1.1770.00004
ORF1ab/nsp15A1-B327I327VAttGtt33B.1.2400.000647
ORF1ab/nsp15A1-B327I327SaTtaGt33B.1.3510.000089
ORF1ab/nsp15A1-B327I327TaTtaCt33P.1.70.000958
ORF1ab/nsp15A1-B327I327AATtGCt22All0
ORF1ab/nsp15A1-B327I327LAttCtt22AY.1020.000053
ORF1ab/nsp15A1-B327I327LAttCtt22AY.1030.000012
ORF1ab/nsp15A1-B327I327VAttGtt22AY.1030.000012
ORF1ab/nsp15A1-B327I327IatTatC22AY.200.000078
ORF1ab/nsp15A1-B327I327IatTatC22AY.330.000134
ORF1ab/nsp15A1-B327I327LAttCtt22AY.4.20.000043
ORF1ab/nsp15A1-B327I327SaTtaGt22AY.430.000009
ORF1ab/nsp15A1-B327I327TaTtaCt22AY.430.000009
ORF1ab/nsp15A1-B327I327delATT---22AY.440.000012
ORF1ab/nsp15A1-B327I327TaTtaCt22AY.630.000774
ORF1ab/nsp15A1-B327I327IatTatC22AY.670.000929
ORF1ab/nsp15A1-B327I327TaTtaCt22AY.790.002421
ORF1ab/nsp15A1-B327I327TaTtaCt22AY.98.10.000097
ORF1ab/nsp15A1-B327I327IatTatC22B.10.000018
ORF1ab/nsp15A1-B327I327VAttGtt22B.1.10.000036
ORF1ab/nsp15A1-B327I327delATT---22B.1.1.1660.066667
ORF1ab/nsp15A1-B327I327IatTatC22B.1.1.2670.020202
ORF1ab/nsp15A1-B327I327TaTtaCt22B.1.1.5190.000079
ORF1ab/nsp15A1-B327I327delATT---22B.1.1.700.000682
ORF1ab/nsp15A1-B327I327TaTtaCt22B.1.1600.000062
ORF1ab/nsp15A1-B327I327MatTatG22B.1.1770.000026
ORF1ab/nsp15A1-B327I327LAttCtt22B.1.177.530.004785
ORF1ab/nsp15A1-B327I327NaTtaAt22B.1.20.000018
ORF1ab/nsp15A1-B327I327delATT---22B.1.20.000018
ORF1ab/nsp15A1-B327I327del1aTta-t22B.1.20.000018
ORF1ab/nsp15A1-B327I327delATT---22B.1.2580.000133
ORF1ab/nsp15A1-B327I327TaTtaCt22B.1.6210.000177
ORF1ab/nsp15A1-B327I327AATtGCt22P.1.120.000968
ORF1ab/nsp15A1-B327I327IatTatC22P.1.40.001953
ORF1ab/nsp15A1-B327I327delATT---11A0.000387
ORF1ab/nsp15A1-B327I327IatTatC11A.2.50.000499
ORF1ab/nsp15A1-B327I327TaTtaCt11AD.20.000219
ORF1ab/nsp15A1-B327I327VAttGtt11AY.10.000396
ORF1ab/nsp15A1-B327I327VAttGtt11AY.1000.000046
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.1020.000027
ORF1ab/nsp15A1-B327I327VAttGtt11AY.1020.000027
ORF1ab/nsp15A1-B327I327NaTtaAt11AY.1100.000113
ORF1ab/nsp15A1-B327I327VAttGtt11AY.1110.000183
ORF1ab/nsp15A1-B327I327delATT---11AY.1130.000142
ORF1ab/nsp15A1-B327I327LAttCtt11AY.116.10.000311
ORF1ab/nsp15A1-B327I327IatTatC11AY.160.00038
ORF1ab/nsp15A1-B327I327VAttGtt11AY.160.00038
ORF1ab/nsp15A1-B327I327NaTtaAt11AY.250.000006
ORF1ab/nsp15A1-B327I327IatTatC11AY.250.000006
ORF1ab/nsp15A1-B327I327VAttGtt11AY.260.000028
ORF1ab/nsp15A1-B327I327IatTatC11AY.260.000028
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.270.000065
ORF1ab/nsp15A1-B327I327SaTtaGt11AY.270.000065
ORF1ab/nsp15A1-B327I327del1Att-tt11AY.30.00001
ORF1ab/nsp15A1-B327I327MatTatG11AY.30.00001
ORF1ab/nsp15A1-B327I327LAttCtt11AY.330.000067
ORF1ab/nsp15A1-B327I327MatTatG11AY.350.000233
ORF1ab/nsp15A1-B327I327IatTatC11AY.360.000148
ORF1ab/nsp15A1-B327I327VAttGtt11AY.380.000499
ORF1ab/nsp15A1-B327I327VAttGtt11AY.390.000025
ORF1ab/nsp15A1-B327I327IatTatC11AY.390.000025
ORF1ab/nsp15A1-B327I327del1aTta-t11AY.40.000002
ORF1ab/nsp15A1-B327I327MatTatG11AY.4.50.000107
ORF1ab/nsp15A1-B327I327delATT---11AY.4.50.000107
ORF1ab/nsp15A1-B327I327SaTtaGt11AY.420.00004
ORF1ab/nsp15A1-B327I327VAttGtt11AY.420.00004
ORF1ab/nsp15A1-B327I327VAttGtt11AY.430.000004
ORF1ab/nsp15A1-B327I327del1AtT-tG11AY.430.000004
ORF1ab/nsp15A1-B327I327IatTatC11AY.440.000006
ORF1ab/nsp15A1-B327I327SaTtaGt11AY.440.000006
ORF1ab/nsp15A1-B327I327VAttGtt11AY.440.000006
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.440.000006
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.460.000104
ORF1ab/nsp15A1-B327I327VAttGtt11AY.46.20.000635
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.46.40.000165
ORF1ab/nsp15A1-B327I327MatTatG11AY.46.60.000072
ORF1ab/nsp15A1-B327I327IatTatC11AY.46.60.000072
ORF1ab/nsp15A1-B327I327VAttGtt11AY.470.000031
ORF1ab/nsp15A1-B327I327LAttCtt11AY.610.000105
ORF1ab/nsp15A1-B327I327del1Att-tt11AY.670.000464
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.740.000116
ORF1ab/nsp15A1-B327I327MatTatG11AY.750.000056
ORF1ab/nsp15A1-B327I327delATT---11AY.840.000437
ORF1ab/nsp15A1-B327I327VAttGtt11AY.860.00083
ORF1ab/nsp15A1-B327I327IatTatA11AY.9.20.000037
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.9.20.000037
ORF1ab/nsp15A1-B327I327delATT---11AY.9.20.000037
ORF1ab/nsp15A1-B327I327TaTtaCt11AY.990.001049
ORF1ab/nsp15A1-B327I327delATT---11AY.990.001049
ORF1ab/nsp15A1-B327I327delATT---11AY.99.10.001553
ORF1ab/nsp15A1-B327I327NaTtaAt11B0.000128
ORF1ab/nsp15A1-B327I327NaTtaAt11B.10.000009
ORF1ab/nsp15A1-B327I327delATT---11B.10.000009
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.10.000018
ORF1ab/nsp15A1-B327I327NaTtaAt11B.1.10.000018
ORF1ab/nsp15A1-B327I327delATT---11B.1.1.1590.004673
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.1.2140.000055
ORF1ab/nsp15A1-B327I327NaTtaAt11B.1.1.2250.007194
ORF1ab/nsp15A1-B327I327IatTatC11B.1.1.250.000569
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.1.280.000311
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.1.2840.000107
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.1.3110.000358
ORF1ab/nsp15A1-B327I327delATT---11B.1.1.3110.000358
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.1.3480.000796
ORF1ab/nsp15A1-B327I327NaTtaAt11B.1.1.4450.037037
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.1.470.005348
ORF1ab/nsp15A1-B327I327IatTatC11B.1.1.500.000679
ORF1ab/nsp15A1-B327I327delATT---11B.1.1.540.003021
ORF1ab/nsp15A1-B327I327FAttTtt11B.1.1.70.000001
ORF1ab/nsp15A1-B327I327del1aTta-t11B.1.1.70.000001
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.1.700.000341
ORF1ab/nsp15A1-B327I327delATT---11B.1.1.990.02381
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.110.30.000718
ORF1ab/nsp15A1-B327I327delATT---11B.1.160.70.002079
ORF1ab/nsp15A1-B327I327NaTtaAt11B.1.1770.000013
ORF1ab/nsp15A1-B327I327delATT---11B.1.1770.000013
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.177.630.002703
ORF1ab/nsp15A1-B327I327delATT---11B.1.177.730.000566
ORF1ab/nsp15A1-B327I327delATT---11B.1.177.830.001481
ORF1ab/nsp15A1-B327I327FAttTtt11B.1.20.000009
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.214.20.0006
ORF1ab/nsp15A1-B327I327SaTtaGt11B.1.221.10.002907
ORF1ab/nsp15A1-B327I327delATT---11B.1.230.006061
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.2390.001221
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.2430.00007
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.2580.000067
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.3020.013333
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.36.80.001
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.36.90.003215
ORF1ab/nsp15A1-B327I327FAttTtt11B.1.3610.001289
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.3670.000792
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.3750.00082
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.3970.004854
ORF1ab/nsp15A1-B327I327FAttTtt11B.1.4290.000024
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.4290.000024
ORF1ab/nsp15A1-B327I327TaTtaCt11B.1.4290.000024
ORF1ab/nsp15A1-B327I327IatTatC11B.1.4970.000315
ORF1ab/nsp15A1-B327I327delATT---11B.1.5250.000113
ORF1ab/nsp15A1-B327I327VAttGtt11B.1.5260.000024
ORF1ab/nsp15A1-B327I327delATT---11B.1.5260.000024
ORF1ab/nsp15A1-B327I327IatTatC11B.1.5260.000024
ORF1ab/nsp15A1-B327I327LAttCtt11B.1.5510.00129
ORF1ab/nsp15A1-B327I327IatTatC11B.1.5960.000087
ORF1ab/nsp15A1-B327I327del1AtT-tW11B.1.617.20.000004
ORF1ab/nsp15A1-B327I327delATT---11B.1.617.20.000004
ORF1ab/nsp15A1-B327I327SaTtaGt11B.1.617.20.000004
ORF1ab/nsp15A1-B327I327delATT---11B.1.6200.000946
ORF1ab/nsp15A1-B327I327delATT---11B.610.005747
ORF1ab/nsp15A1-B327I327IatTatC11C.36.30.000567
ORF1ab/nsp15A1-B327I327NaTtaAt11C.36.30.000567
ORF1ab/nsp15A1-B327I327VAttGtt11D.20.000075
ORF1ab/nsp15A1-B327I327IatTatC11D.20.000075
ORF1ab/nsp15A1-B327I327NaTtaAt11D.20.000075
ORF1ab/nsp15A1-B327I327TaTtaCt11P.10.000016
ORF1ab/nsp15A1-B327I327IatTatC11P.10.000016
ORF1ab/nsp15A1-B327I327VAttGtt11P.1.120.000484
ORF1ab/nsp15A1-B327I327TaTtaCt11P.1.140.000048
ORF1ab/nsp15A1-B327I327delATT---11P.1.150.000232
ORF1ab/nsp15A1-B327I327delATT---11P.1.70.000319
ORF1ab/nsp15A1-B327I327delATT---11Q.80.000165