CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 320 | V320L | V6772L | nonsyn | Gtg | Ttg | 9435 | 9403 | 0.996608 | 20578-20580 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 9403 | 9435 | All | 0.001798 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3749 | 3751 | B.1.1.7 | 0.003356 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 677 | 682 | AY.4 | 0.001054 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 412 | 412 | B.1.13 | 0.978622 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 393 | 396 | B.1.617.2 | 0.00148 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 322 | 322 | AY.43 | 0.001427 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 284 | 284 | B.1.466.2 | 0.111111 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 229 | 229 | AY.120.1 | 0.073515 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 227 | 227 | B.1.1 | 0.004118 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 200 | 200 | AY.103 | 0.001242 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 159 | 159 | AY.42 | 0.006397 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 155 | 155 | AY.109 | 0.114645 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 155 | 155 | B.1.2 | 0.001365 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 151 | 151 | AY.3 | 0.001502 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 144 | 144 | AY.83 | 0.248276 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 132 | 132 | B.1.351 | 0.003924 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 121 | 121 | AY.44 | 0.000736 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 116 | 116 | B.1.526 | 0.002727 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 98 | 99 | B.1 | 0.000898 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 89 | 89 | P.1 | 0.001402 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 71 | 72 | AY.25 | 0.000427 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 64 | 64 | AY.39 | 0.001582 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 62 | 63 | AY.9.2 | 0.002277 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 60 | 60 | B.1.595 | 0.015658 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 46 | 47 | AY.20 | 0.001788 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 43 | 45 | B.1.429 | 0.001012 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 44 | 44 | AY.4.2 | 0.000954 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 43 | 43 | AY.102 | 0.00114 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 41 | 41 | AY.26 | 0.001161 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 39 | 39 | AY.108 | 0.042999 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 37 | 37 | AY.4.5 | 0.003977 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 29 | 36 | AY.5 | 0.000599 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 32 | 32 | AY.4.2.1 | 0.004768 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 30 | 30 | B.1.177 | 0.000395 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 29 | 29 | B.1.160 | 0.000904 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 26 | 26 | B.1.621 | 0.002301 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 24 | 24 | AY.100 | 0.001104 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 23 | 23 | AY.46.5 | 0.004563 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 23 | 23 | B.1.221 | 0.001634 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 21 | 21 | AY.34 | 0.002036 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 20 | 20 | B.1.1.519 | 0.000794 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 20 | 20 | B.1.36 | 0.002918 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 19 | 19 | AY.120 | 0.000706 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 19 | 19 | AY.29 | 0.0003 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 18 | 18 | AY.117 | 0.001521 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 17 | 17 | AY.6 | 0.000699 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 16 | 16 | AY.119 | 0.000565 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 16 | 16 | P.1.7 | 0.005109 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 15 | 15 | AY.47 | 0.000467 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 13 | 13 | AY.75.1 | 0.002344 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 13 | 13 | P.1.4 | 0.012695 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 12 | 12 | AY.23 | 0.000837 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 12 | 12 | AY.5.4 | 0.00332 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 11 | 11 | AY.61 | 0.001153 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 11 | 11 | B.1.1.420 | 0.011066 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 11 | 11 | B.1.177.46 | 0.010101 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 11 | 11 | B.1.525 | 0.001245 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 10 | 10 | AY.27 | 0.000647 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 10 | 10 | AY.54 | 0.000953 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 10 | 10 | AY.75 | 0.00056 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 10 | 10 | B.1.1.222 | 0.00204 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 10 | 10 | L.1 | 0.019048 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 9 | 9 | AY.46 | 0.000937 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 9 | 9 | AY.98.1 | 0.000436 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 8 | 8 | AY.39.1 | 0.000317 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 8 | 8 | AY.99.2 | 0.000737 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 8 | 8 | B.1.1.326 | 0.014085 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 8 | 8 | B.1.243 | 0.000557 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 7 | 7 | AY.33 | 0.000467 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 6 | 7 | AY.46.6 | 0.000433 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 7 | 7 | B.1.177.86 | 0.001284 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 7 | 7 | B.1.618 | 0.028226 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 7 | 7 | N.3 | 0.040698 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 6 | 6 | AY.38 | 0.002996 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 6 | 6 | B.1.206 | 0.004894 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 6 | C.36.3 | 0.002269 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | AY.106 | 0.001674 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | AY.14 | 0.00044 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | AY.4.4 | 0.002046 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | B.1.177.23 | 0.016181 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | B.1.240 | 0.001078 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | B.1.258.3 | 0.008375 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | B.1.582 | 0.002453 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | B.1.617.1 | 0.000645 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 5 | 5 | P.1.12 | 0.00242 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | AY.116 | 0.001147 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | AY.120.2 | 0.005141 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | B.1.1.341 | 0.235294 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | B.1.147 | 0.003023 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | B.1.258 | 0.000266 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | B.1.469 | 0.01444 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | B.1.564.1 | 0.006309 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | D.5 | 0.0199 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | P.1.15 | 0.000929 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.105 | 0.001929 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.118 | 0.000188 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.12 | 0.000948 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.23.1 | 0.001252 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.41 | 0.000882 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.7.2 | 0.001678 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.71 | 0.001425 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.79 | 0.003632 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.81 | 0.005976 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.1.1.39 | 0.001529 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.1.1.50 | 0.002037 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.1.214.2 | 0.001799 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.1.351.3 | 0.002629 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | B.3 | 0.002492 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | N.5 | 0.0053 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | A | 0.000774 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.39.1.1 | 0.001449 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.51 | 0.001818 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.60 | 0.001876 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.8 | 0.001212 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | AY.89 | 0.009804 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.1.526 | 0.007092 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.177.65 | 0.001331 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.177.68 | 0.030303 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.177.8 | 0.001505 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.351.5 | 0.001199 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.391 | 0.002255 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.428.2 | 0.066667 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.471 | 0.005464 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.536 | 0.047619 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.568 | 0.002222 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | C.1.2 | 0.008511 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | 0.055556 | |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AK.2 | 0.045455 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.165 | 0.015385 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.228 | 0.003049 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.230 | 0.009174 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.251 | 0.007937 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.362 | 0.005618 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.389 | 0.006061 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.391 | 0.008547 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.446 | 0.076923 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.518 | 0.006329 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.160.9 | 0.007194 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.245 | 0.03125 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.313 | 0.006579 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.537 | 0.02 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | C.28 | 0.04 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp15A1-B | 320 | V320L | Gtg | Ttg | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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