CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 313

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp15A1-B	313	V313V	V6765V	syn	gtA	gtG	356	320	0.898876	20557-20559
ORF1ab/nsp15A1-B	313	V313V	V6765V	syn	gtA	gtT	356	19	0.0533708	20557-20559
ORF1ab/nsp15A1-B	313	V313V	V6765V	syn	gtA	gtC	356	17	0.0477528	20557-20559
ORF1ab/nsp15A1-B	313	V313L	V6765L	nonsyn	Gta	Tta	267	253	0.947566	20557-20559
ORF1ab/nsp15A1-B	313	V313L	V6765L	nonsyn	Gta	Cta	267	14	0.0524345	20557-20559
ORF1ab/nsp15A1-B	313	V313I	V6765I	nonsyn	Gta	Ata	96	96	1	20557-20559
ORF1ab/nsp15A1-B	313	V313del	V6765del	del	GTA	---	47	47	1	20557-20559
ORF1ab/nsp15A1-B	313	V313A	V6765A	nonsyn	gTa	gCa	26	26	1	20557-20559
ORF1ab/nsp15A1-B	313	V313G	V6765G	nonsyn	gTa	gGa	8	8	1	20557-20559
ORF1ab/nsp15A1-B	313	V313del1	V6765del1	del	gtA	gt-	6	5	0.833333	20557-20559
ORF1ab/nsp15A1-B	313	V313del1	V6765del1	del	Gta	-ta	6	1	0.166667	20557-20559
ORF1ab/nsp15A1-B	313	V313del2	V6765del2	del	GTa	--a	3	2	0.666667	20557-20559
ORF1ab/nsp15A1-B	313	V313del2	V6765del2	del	gTA	g--	3	1	0.333333	20557-20559
ORF1ab/nsp15A1-B	313	V313E	V6765E	nonsyn	gTa	gAa	2	2	1	20557-20559
ORF1ab/nsp15A1-B	313	V313S	V6765S	nonsyn	GTA	TCT	1	1	1	20557-20559
ORF1ab/nsp15A1-B	313	V313W	V6765W	nonsyn	GTA	TGG	1	1	1	20557-20559

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	320	356	All	0.000061
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	19	356	All	0.000004
ORF1ab/nsp15A1-B	313	V313V	gtA	gtC	17	356	All	0.000003
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	253	267	All	0.000048
ORF1ab/nsp15A1-B	313	V313L	Gta	Cta	14	267	All	0.000003
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	153	153	AY.43	0.000678
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	96	96	All	0.000018
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	59	60	AY.4	0.000092
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	60	AY.4	0.000002
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	57	57	B.1.36.23	0.934426
ORF1ab/nsp15A1-B	313	V313del	GTA	---	47	47	All	0.000009
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	35	36	AY.43	0.000155
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	36	AY.43	0.000004
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	17	31	B.1.1.7	0.000015
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	9	31	B.1.1.7	0.000008
ORF1ab/nsp15A1-B	313	V313V	gtA	gtC	5	31	B.1.1.7	0.000004
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	26	26	All	0.000005
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	24	24	AY.44	0.000146
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	19	19	B.1.1.7	0.000017
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	18	18	B.1.617.2	0.000068
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	15	15	AY.25	0.00009
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	14	14	AY.4	0.000022
ORF1ab/nsp15A1-B	313	V313del	GTA	---	14	14	B.1.1.7	0.000013
ORF1ab/nsp15A1-B	313	V313L	Gta	Cta	8	14	B.1.1.7	0.000007
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	6	14	B.1.1.7	0.000005
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	13	13	AY.87	0.010824
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	12	12	AY.3	0.000119
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	12	12	B.1.177	0.000158
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	9	11	B.1.617.2	0.000034
ORF1ab/nsp15A1-B	313	V313L	Gta	Cta	2	11	B.1.617.2	0.000008
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	10	10	AY.4	0.000016
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	10	10	B.1.177	0.000132
ORF1ab/nsp15A1-B	313	V313V	gtA	gtC	6	10	P.1	0.000095
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	10	P.1	0.000063
ORF1ab/nsp15A1-B	313	V313G	gTa	gGa	8	8	All	0.000002
ORF1ab/nsp15A1-B	313	V313G	gTa	gGa	8	8	AY.4	0.000012
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	4	8	B.1.525	0.000453
ORF1ab/nsp15A1-B	313	V313L	Gta	Cta	4	8	B.1.525	0.000453
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	7	7	AY.4	0.000011
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	7	7	AY.44	0.000043
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	7	7	B.1.526	0.000165
ORF1ab/nsp15A1-B	313	V313del	GTA	---	6	6		0.333333
ORF1ab/nsp15A1-B	313	V313del1	gtA	gt-	5	6	All	0.000001
ORF1ab/nsp15A1-B	313	V313del1	Gta	-ta	1	6	All	0
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	6	6	AY.103	0.000037
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	5	5	AY.54	0.000477
ORF1ab/nsp15A1-B	313	V313V	gtA	gtC	3	5	B.1.2	0.000026
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	5	B.1.2	0.000018
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	5	5	B.1.617.2	0.000019
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	AY.102	0.000106
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	4	4	AY.103	0.000025
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	AY.120	0.000149
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	4	4	AY.25	0.000024
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	AY.4.2	0.000087
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	B.1	0.000037
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	B.1.1.333	0.004306
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	B.1.509	0.003463
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	4	4	B.1.617.1	0.000516
ORF1ab/nsp15A1-B	313	V313del2	GTa	--a	2	3	All	0
ORF1ab/nsp15A1-B	313	V313del2	gTA	g--	1	3	All	0
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	3	3	AY.32	0.001597
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	3	3	AY.39	0.000074
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	3	3	AY.61	0.000314
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	3	3	B.1.1	0.000054
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	3	3	B.1.1.7	0.000003
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	3	3	B.1.177.52	0.005272
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	3	B.1.36	0.000292
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	3	B.1.36	0.000146
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	3	3	B.6.3	0.078947
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	3	3	D.2	0.000225
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	3	3	D.2	0.000225
ORF1ab/nsp15A1-B	313	V313del1	gtA	gt-	2	2		0.111111
ORF1ab/nsp15A1-B	313	V313E	gTa	gAa	2	2	All	0
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	2	2	AY.106	0.00067
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	AY.24	0.000862
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	2	AY.33	0.000067
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	2	AY.33	0.000067
ORF1ab/nsp15A1-B	313	V313del	GTA	---	2	2	AY.4	0.000003
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	2	2	AY.4.2	0.000043
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	AY.45	0.000243
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	2	2	AY.47	0.000062
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	AY.99.2	0.000184
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	2	2	B.1.1	0.000036
ORF1ab/nsp15A1-B	313	V313V	gtA	gtC	2	2	B.1.1.26	0.010471
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	B.1.1.306	0.000877
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	2	B.1.1.519	0.00004
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	2	B.1.1.519	0.00004
ORF1ab/nsp15A1-B	313	V313del2	GTa	--a	1	2	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	313	V313del2	gTA	g--	1	2	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	313	V313del	GTA	---	2	2	B.1.1.70	0.000682
ORF1ab/nsp15A1-B	313	V313del	GTA	---	2	2	B.1.2	0.000018
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	2	2	B.1.2	0.000018
ORF1ab/nsp15A1-B	313	V313del	GTA	---	2	2	B.1.258	0.000133
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	B.1.429	0.000047
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	B.1.568	0.002222
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	2	2	B.1.628	0.000705
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	2	2	P.2	0.000373
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	A	0.000387
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	A	0.000387
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	A.2	0.000662
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	1	A.2.4	0.003367
ORF1ab/nsp15A1-B	313	V313S	GTA	TCT	1	1	All	0
ORF1ab/nsp15A1-B	313	V313W	GTA	TGG	1	1	All	0
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.100	0.000046
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.100	0.000046
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	AY.103	0.000006
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.113	0.000142
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.117	0.000085
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.120	0.000037
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.121	0.000135
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.13	0.000161
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.2	0.000356
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.23	0.00007
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.25	0.000006
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.26	0.000028
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.29	0.000016
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	AY.29	0.000016
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	AY.3	0.00001
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	AY.3	0.00001
ORF1ab/nsp15A1-B	313	V313del1	gtA	gt-	1	1	AY.3	0.00001
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	AY.3.1	0.000085
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.3.1	0.000085
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	1	AY.30	0.000396
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	AY.36	0.000148
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.38	0.000499
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	AY.39	0.000025
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.39.1	0.00004
ORF1ab/nsp15A1-B	313	V313E	gTa	gAa	1	1	AY.4	0.000002
ORF1ab/nsp15A1-B	313	V313del2	GTa	--a	1	1	AY.4.5	0.000107
ORF1ab/nsp15A1-B	313	V313del1	Gta	-ta	1	1	AY.4.5	0.000107
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.43	0.000004
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	AY.44	0.000006
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	AY.44	0.000006
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.46	0.000104
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.46.6	0.000072
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	1	AY.48	0.000465
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.5	0.000021
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.5	0.000021
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.53	0.000288
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.71	0.000475
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.84	0.000437
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	AY.87	0.000833
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	AY.9	0.000068
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.94	0.000443
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	AY.98	0.000079
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	AY.98.1	0.000048
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1	0.000009
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	B.1	0.000009
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.1.159	0.004673
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.1.222	0.000204
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.1.25	0.000569
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.1.311	0.000358
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.1.450	0.034483
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.1.519	0.00004
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	B.1.1.519	0.00004
ORF1ab/nsp15A1-B	313	V313del1	gtA	gt-	1	1	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	313	V313W	GTA	TGG	1	1	B.1.1.7	0.000001
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.110.3	0.000718
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.110.3	0.000718
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.111	0.001175
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.160	0.000031
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	B.1.160	0.000031
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.160.7	0.002079
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.177	0.000013
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	B.1.177	0.000013
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.177.18	0.00116
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	1	B.1.177.4	0.000211
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.177.69	0.001484
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.177.83	0.001481
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.177.86	0.000183
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	B.1.2	0.000009
ORF1ab/nsp15A1-B	313	V313E	gTa	gAa	1	1	B.1.2	0.000009
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.221	0.000071
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.23	0.006061
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.240	0.000216
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.258.17	0.000104
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.320	0.001245
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.351	0.00003
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.351	0.00003
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.36.39	0.002217
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.36.39	0.002217
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.369	0.000285
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.400	0.000429
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.429	0.000024
ORF1ab/nsp15A1-B	313	V313V	gtA	gtT	1	1	B.1.462	0.007246
ORF1ab/nsp15A1-B	313	V313V	gtA	gtC	1	1	B.1.497	0.000315
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.525	0.000113
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.526	0.000024
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.551	0.00129
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.582	0.000491
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	B.1.596	0.000087
ORF1ab/nsp15A1-B	313	V313del1	gtA	gt-	1	1	B.1.596	0.000087
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	B.1.596	0.000087
ORF1ab/nsp15A1-B	313	V313A	gTa	gCa	1	1	B.1.596	0.000087
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	313	V313S	GTA	TCT	1	1	B.1.617.2	0.000004
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	B.1.620	0.000946
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	B.1.637	0.000073
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	P.1	0.000016
ORF1ab/nsp15A1-B	313	V313L	Gta	Tta	1	1	P.1.13	0.000898
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	P.1.15	0.000232
ORF1ab/nsp15A1-B	313	V313I	Gta	Ata	1	1	P.1.17	0.000162
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	P.1.7	0.000319
ORF1ab/nsp15A1-B	313	V313del	GTA	---	1	1	Q.8	0.000165
ORF1ab/nsp15A1-B	313	V313V	gtA	gtG	1	1	R.1	0.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.