CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 312 & Codon = tTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B312S312FS6764FnonsyntCttTt30763076120554-20556

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B312S312FtCttTt30763076All0.000588
ORF1ab/nsp15A1-B312S312FtCttTt349349AY.40.000543
ORF1ab/nsp15A1-B312S312FtCttTt276276AY.440.00168
ORF1ab/nsp15A1-B312S312FtCttTt256256AY.250.00154
ORF1ab/nsp15A1-B312S312FtCttTt207207B.1.617.20.000779
ORF1ab/nsp15A1-B312S312FtCttTt200200B.1.1.70.000179
ORF1ab/nsp15A1-B312S312FtCttTt186186AY.9.20.006832
ORF1ab/nsp15A1-B312S312FtCttTt158158AY.1030.000981
ORF1ab/nsp15A1-B312S312FtCttTt124124AY.9.10.010382
ORF1ab/nsp15A1-B312S312FtCttTt109109AY.1200.004052
ORF1ab/nsp15A1-B312S312FtCttTt100100AY.1020.002651
ORF1ab/nsp15A1-B312S312FtCttTt8585AY.430.000377
ORF1ab/nsp15A1-B312S312FtCttTt7676B.10.000696
ORF1ab/nsp15A1-B312S312FtCttTt6767B.1.36.240.41358
ORF1ab/nsp15A1-B312S312FtCttTt6060AY.1170.005071
ORF1ab/nsp15A1-B312S312FtCttTt6060AY.46.60.004332
ORF1ab/nsp15A1-B312S312FtCttTt4242AY.390.001038
ORF1ab/nsp15A1-B312S312FtCttTt3535B.1.10.000635
ORF1ab/nsp15A1-B312S312FtCttTt3434AY.290.000536
ORF1ab/nsp15A1-B312S312FtCttTt3434AY.30.000338
ORF1ab/nsp15A1-B312S312FtCttTt3333B.1.2871
ORF1ab/nsp15A1-B312S312FtCttTt2828B.1.20.000247
ORF1ab/nsp15A1-B312S312FtCttTt2424AY.750.001345
ORF1ab/nsp15A1-B312S312FtCttTt2424B.1.36.290.012416
ORF1ab/nsp15A1-B312S312FtCttTt2222B.1.1770.00029
ORF1ab/nsp15A1-B312S312FtCttTt1818AY.230.001255
ORF1ab/nsp15A1-B312S312FtCttTt1717B.1.1.5190.000675
ORF1ab/nsp15A1-B312S312FtCttTt1616AY.540.001526
ORF1ab/nsp15A1-B312S312FtCttTt1515AY.330.001002
ORF1ab/nsp15A1-B312S312FtCttTt1414AY.99.20.00129
ORF1ab/nsp15A1-B312S312FtCttTt1212AY.850.005126
ORF1ab/nsp15A1-B312S312FtCttTt1111AY.1130.001566
ORF1ab/nsp15A1-B312S312FtCttTt1111AY.200.000428
ORF1ab/nsp15A1-B312S312FtCttTt1111AY.470.000342
ORF1ab/nsp15A1-B312S312FtCttTt1111B.1.2400.002371
ORF1ab/nsp15A1-B312S312FtCttTt1010AY.1180.000626
ORF1ab/nsp15A1-B312S312FtCttTt1010AY.4.20.000217
ORF1ab/nsp15A1-B312S312FtCttTt1010AY.60.000411
ORF1ab/nsp15A1-B312S312FtCttTt1010B.1.1600.000312
ORF1ab/nsp15A1-B312S312FtCttTt1010B.1.4290.000235
ORF1ab/nsp15A1-B312S312FtCttTt99AY.980.000711
ORF1ab/nsp15A1-B312S312FtCttTt99B.1.360.001313
ORF1ab/nsp15A1-B312S312FtCttTt88AZ.10.006938
ORF1ab/nsp15A1-B312S312FtCttTt77A.2.50.003493
ORF1ab/nsp15A1-B312S312FtCttTt77AY.460.000729
ORF1ab/nsp15A1-B312S312FtCttTt77B.1.2430.000487
ORF1ab/nsp15A1-B312S312FtCttTt77B.1.2800.05
ORF1ab/nsp15A1-B312S312FtCttTt66AY.1000.000276
ORF1ab/nsp15A1-B312S312FtCttTt66AY.340.000582
ORF1ab/nsp15A1-B312S312FtCttTt66B.1.1.2940.007595
ORF1ab/nsp15A1-B312S312FtCttTt55AY.4.50.000537
ORF1ab/nsp15A1-B312S312FtCttTt55AY.450.000608
ORF1ab/nsp15A1-B312S312FtCttTt55AY.46.20.003177
ORF1ab/nsp15A1-B312S312FtCttTt55AY.5.30.001687
ORF1ab/nsp15A1-B312S312FtCttTt55AY.75.10.000902
ORF1ab/nsp15A1-B312S312FtCttTt55B.1.1.4320.006329
ORF1ab/nsp15A1-B312S312FtCttTt44AY.1190.000141
ORF1ab/nsp15A1-B312S312FtCttTt44AY.50.000083
ORF1ab/nsp15A1-B312S312FtCttTt44AY.590.002119
ORF1ab/nsp15A1-B312S312FtCttTt44B.1.1.3120.007648
ORF1ab/nsp15A1-B312S312FtCttTt44B.1.2060.003263
ORF1ab/nsp15A1-B312S312FtCttTt44B.1.3690.001141
ORF1ab/nsp15A1-B312S312FtCttTt44B.1.5260.000094
ORF1ab/nsp15A1-B312S312FtCttTt33AY.1080.003308
ORF1ab/nsp15A1-B312S312FtCttTt33AY.1090.002219
ORF1ab/nsp15A1-B312S312FtCttTt33AY.140.000264
ORF1ab/nsp15A1-B312S312FtCttTt33AY.420.000121
ORF1ab/nsp15A1-B312S312FtCttTt33AY.840.001312
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.1.2990.036585
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.160.180.021898
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.177.40.000633
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.438.10.000322
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.4780.035294
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.5950.000783
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.5960.000261
ORF1ab/nsp15A1-B312S312FtCttTt33B.1.6210.000266
ORF1ab/nsp15A1-B312S312FtCttTt22A0.000774
ORF1ab/nsp15A1-B312S312FtCttTt22A.10.000564
ORF1ab/nsp15A1-B312S312FtCttTt22A.2.5.20.003145
ORF1ab/nsp15A1-B312S312FtCttTt22AY.10.000791
ORF1ab/nsp15A1-B312S312FtCttTt22AY.1110.000366
ORF1ab/nsp15A1-B312S312FtCttTt22AY.1160.000574
ORF1ab/nsp15A1-B312S312FtCttTt22AY.260.000057
ORF1ab/nsp15A1-B312S312FtCttTt22AY.270.000129
ORF1ab/nsp15A1-B312S312FtCttTt22AY.3.10.000171
ORF1ab/nsp15A1-B312S312FtCttTt22AY.4.2.10.000298
ORF1ab/nsp15A1-B312S312FtCttTt22AY.46.40.000329
ORF1ab/nsp15A1-B312S312FtCttTt22AY.5.40.000553
ORF1ab/nsp15A1-B312S312FtCttTt22AY.7.10.000225
ORF1ab/nsp15A1-B312S312FtCttTt22AY.790.002421
ORF1ab/nsp15A1-B312S312FtCttTt22AY.900.001369
ORF1ab/nsp15A1-B312S312FtCttTt22AY.920.000575
ORF1ab/nsp15A1-B312S312FtCttTt22AY.98.10.000097
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.1.1640.010309
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.1.3370.007194
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.1.370.000386
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.1.390.001019
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.1.4310.032258
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.177.210.000153
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.177.70.00033
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.2650.002541
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.3770.009132
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.4990.002101
ORF1ab/nsp15A1-B312S312FtCttTt22B.1.617.10.000258
ORF1ab/nsp15A1-B312S312FtCttTt22B.230.005848
ORF1ab/nsp15A1-B312S312FtCttTt22D.20.00015
ORF1ab/nsp15A1-B312S312FtCttTt22P.10.000032
ORF1ab/nsp15A1-B312S312FtCttTt22Q.80.00033
ORF1ab/nsp15A1-B312S312FtCttTt11A.2.40.003367
ORF1ab/nsp15A1-B312S312FtCttTt11AE.80.000489
ORF1ab/nsp15A1-B312S312FtCttTt11AP.10.001502
ORF1ab/nsp15A1-B312S312FtCttTt11AY.1010.00049
ORF1ab/nsp15A1-B312S312FtCttTt11AY.1040.001984
ORF1ab/nsp15A1-B312S312FtCttTt11AY.1100.000113
ORF1ab/nsp15A1-B312S312FtCttTt11AY.1140.000231
ORF1ab/nsp15A1-B312S312FtCttTt11AY.120.000316
ORF1ab/nsp15A1-B312S312FtCttTt11AY.34.10.00051
ORF1ab/nsp15A1-B312S312FtCttTt11AY.39.10.00004
ORF1ab/nsp15A1-B312S312FtCttTt11AY.39.1.10.000725
ORF1ab/nsp15A1-B312S312FtCttTt11AY.410.000294
ORF1ab/nsp15A1-B312S312FtCttTt11AY.46.10.001027
ORF1ab/nsp15A1-B312S312FtCttTt11AY.46.50.000198
ORF1ab/nsp15A1-B312S312FtCttTt11AY.530.000288
ORF1ab/nsp15A1-B312S312FtCttTt11AY.670.000464
ORF1ab/nsp15A1-B312S312FtCttTt11AY.680.000274
ORF1ab/nsp15A1-B312S312FtCttTt11AY.690.000187
ORF1ab/nsp15A1-B312S312FtCttTt11AY.70.000196
ORF1ab/nsp15A1-B312S312FtCttTt11AY.700.000209
ORF1ab/nsp15A1-B312S312FtCttTt11AY.710.000475
ORF1ab/nsp15A1-B312S312FtCttTt11AY.740.000116
ORF1ab/nsp15A1-B312S312FtCttTt11AY.780.001541
ORF1ab/nsp15A1-B312S312FtCttTt11AY.870.000833
ORF1ab/nsp15A1-B312S312FtCttTt11AY.910.00073
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.10.000327
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.100.001115
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.1350.004695
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.1980.001468
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.2200.001859
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.2320.001815
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.2660.012195
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.3110.000358
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1.3170.000412
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1170.0125
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1280.000635
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.130.002375
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.1470.000756
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.120.000152
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.150.000631
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.330.001645
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.350.000691
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.440.000519
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.480.003125
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.570.000281
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.600.000218
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.177.860.000183
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.2210.000071
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.2340.000132
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.2410.000812
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.2580.000067
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.258.170.000104
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.3110.000275
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.351.30.000876
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.36.10.00114
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.36.170.000494
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.3620.001541
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.3790.017241
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.4620.007246
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.5610.000397
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.595.10.005848
ORF1ab/nsp15A1-B312S312FtCttTt11B.1.5970.00463
ORF1ab/nsp15A1-B312S312FtCttTt11B.270.015385
ORF1ab/nsp15A1-B312S312FtCttTt11B.60.00091
ORF1ab/nsp15A1-B312S312FtCttTt11C.10.002392
ORF1ab/nsp15A1-B312S312FtCttTt11P.1.140.000048
ORF1ab/nsp15A1-B312S312FtCttTt11P.20.000187
ORF1ab/nsp15A1-B312S312FtCttTt11P.60.003145