CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 308

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B308S308SS6760SsyntcCtcT426541080.96318920542-20544
ORF1ab/nsp15A1-B308S308SS6760SsyntcCtcA42651560.036576820542-20544
ORF1ab/nsp15A1-B308S308SS6760SsyntcCtcG426510.00023446720542-20544
ORF1ab/nsp15A1-B308S308FS6760FnonsyntCctTc472472120542-20544
ORF1ab/nsp15A1-B308S308AS6760AnonsynTccGcc5454120542-20544
ORF1ab/nsp15A1-B308S308delS6760deldelTCC---5252120542-20544
ORF1ab/nsp15A1-B308S308PS6760PnonsynTccCcc38370.97368420542-20544
ORF1ab/nsp15A1-B308S308PS6760PnonsynTcCCcT3810.026315820542-20544
ORF1ab/nsp15A1-B308S308YS6760YnonsyntCctAc29280.96551720542-20544
ORF1ab/nsp15A1-B308S308YS6760YnonsyntCCtAT2910.034482820542-20544
ORF1ab/nsp15A1-B308S308TS6760TnonsynTccAcc21200.95238120542-20544
ORF1ab/nsp15A1-B308S308TS6760TnonsynTcCAcT2110.04761920542-20544
ORF1ab/nsp15A1-B308S308del1S6760del1deltCct-c1070.720542-20544
ORF1ab/nsp15A1-B308S308del1S6760del1delTcc-cc1010.120542-20544
ORF1ab/nsp15A1-B308S308del1S6760del1delTcC-cT1010.120542-20544
ORF1ab/nsp15A1-B308S308del1S6760del1deltCCt-N1010.120542-20544
ORF1ab/nsp15A1-B308S308del2S6760del2deltCCt--44120542-20544
ORF1ab/nsp15A1-B308S308IS6760InonsynTCcATc22120542-20544
ORF1ab/nsp15A1-B308S308XS6760XnonsyntCCtGA11120542-20544
ORF1ab/nsp15A1-B308S308LS6760LnonsynTCCCTT11120542-20544

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B308S308StcCtcT41084265All0.000786
ORF1ab/nsp15A1-B308S308StcCtcA1564265All0.00003
ORF1ab/nsp15A1-B308S308StcCtcG14265All0
ORF1ab/nsp15A1-B308S308StcCtcT17551774B.1.1.70.001571
ORF1ab/nsp15A1-B308S308StcCtcA191774B.1.1.70.000017
ORF1ab/nsp15A1-B308S308FtCctTc472472All0.00009
ORF1ab/nsp15A1-B308S308StcCtcT315327AY.40.00049
ORF1ab/nsp15A1-B308S308StcCtcA12327AY.40.000019
ORF1ab/nsp15A1-B308S308StcCtcT296303AY.30.002944
ORF1ab/nsp15A1-B308S308StcCtcA7303AY.30.00007
ORF1ab/nsp15A1-B308S308StcCtcT142142B.1.177.120.021541
ORF1ab/nsp15A1-B308S308StcCtcT130137B.1.617.20.00049
ORF1ab/nsp15A1-B308S308StcCtcA7137B.1.617.20.000026
ORF1ab/nsp15A1-B308S308StcCtcT129129AY.790.156174
ORF1ab/nsp15A1-B308S308StcCtcT109118AY.440.000663
ORF1ab/nsp15A1-B308S308StcCtcA9118AY.440.000055
ORF1ab/nsp15A1-B308S308FtCctTc9797B.1.1.70.000087
ORF1ab/nsp15A1-B308S308StcCtcT6975AY.1030.000428
ORF1ab/nsp15A1-B308S308StcCtcA675AY.1030.000037
ORF1ab/nsp15A1-B308S308StcCtcT4568B.1.20.000396
ORF1ab/nsp15A1-B308S308StcCtcA2368B.1.20.000203
ORF1ab/nsp15A1-B308S308StcCtcT6367B.1.10.001143
ORF1ab/nsp15A1-B308S308StcCtcA467B.1.10.000073
ORF1ab/nsp15A1-B308S308StcCtcT6566B.10.000595
ORF1ab/nsp15A1-B308S308StcCtcA166B.10.000009
ORF1ab/nsp15A1-B308S308StcCtcT5765AY.250.000343
ORF1ab/nsp15A1-B308S308StcCtcA865AY.250.000048
ORF1ab/nsp15A1-B308S308FtCctTc6262AY.160.023538
ORF1ab/nsp15A1-B308S308ATccGcc5454All0.00001
ORF1ab/nsp15A1-B308S308delTCC---5252All0.00001
ORF1ab/nsp15A1-B308S308StcCtcT5051P.10.000788
ORF1ab/nsp15A1-B308S308StcCtcA151P.10.000016
ORF1ab/nsp15A1-B308S308StcCtcT4545AA.81
ORF1ab/nsp15A1-B308S308PTccCcc3738All0.000007
ORF1ab/nsp15A1-B308S308PTcCCcT138All0
ORF1ab/nsp15A1-B308S308FtCctTc3737AY.40.000058
ORF1ab/nsp15A1-B308S308StcCtcT3436AY.430.000151
ORF1ab/nsp15A1-B308S308StcCtcG136AY.430.000004
ORF1ab/nsp15A1-B308S308StcCtcA136AY.430.000004
ORF1ab/nsp15A1-B308S308StcCtcT3536B.1.1600.001092
ORF1ab/nsp15A1-B308S308StcCtcA136B.1.1600.000031
ORF1ab/nsp15A1-B308S308StcCtcT3434B.1.1.3461
ORF1ab/nsp15A1-B308S308FtCctTc3131AY.99.20.002857
ORF1ab/nsp15A1-B308S308YtCctAc2829All0.000005
ORF1ab/nsp15A1-B308S308YtCCtAT129All0
ORF1ab/nsp15A1-B308S308StcCtcT2428AY.610.002515
ORF1ab/nsp15A1-B308S308StcCtcA428AY.610.000419
ORF1ab/nsp15A1-B308S308StcCtcT2626B.1.5950.006785
ORF1ab/nsp15A1-B308S308FtCctTc2424AY.1030.000149
ORF1ab/nsp15A1-B308S308StcCtcT2424B.1.1770.000316
ORF1ab/nsp15A1-B308S308StcCtcT2223AY.360.003261
ORF1ab/nsp15A1-B308S308StcCtcA123AY.360.000148
ORF1ab/nsp15A1-B308S308StcCtcT2222AY.4.20.000477
ORF1ab/nsp15A1-B308S308TTccAcc2021All0.000004
ORF1ab/nsp15A1-B308S308TTcCAcT121All0
ORF1ab/nsp15A1-B308S308StcCtcT1921AY.1020.000504
ORF1ab/nsp15A1-B308S308StcCtcA221AY.1020.000053
ORF1ab/nsp15A1-B308S308PTccCcc2121B.1.177.820.010024
ORF1ab/nsp15A1-B308S308FtCctTc2121B.1.617.20.000079
ORF1ab/nsp15A1-B308S308FtCctTc1919B.1.20.000167
ORF1ab/nsp15A1-B308S308StcCtcT1818AY.730.011976
ORF1ab/nsp15A1-B308S308StcCtcT1818B.1.1.2770.013657
ORF1ab/nsp15A1-B308S308StcCtcT1717AY.290.000268
ORF1ab/nsp15A1-B308S308FtCctTc1616B.1.1.5190.000635
ORF1ab/nsp15A1-B308S308StcCtcT1616P.1.100.004312
ORF1ab/nsp15A1-B308S308StcCtcT1414A.23.10.009859
ORF1ab/nsp15A1-B308S308FtCctTc1414AY.1190.000494
ORF1ab/nsp15A1-B308S308StcCtcT1414B.1.2340.001847
ORF1ab/nsp15A1-B308S308StcCtcT1314B.1.4290.000306
ORF1ab/nsp15A1-B308S308StcCtcA114B.1.4290.000024
ORF1ab/nsp15A1-B308S308StcCtcT1313AY.420.000523
ORF1ab/nsp15A1-B308S308StcCtcT1212AY.200.000466
ORF1ab/nsp15A1-B308S308StcCtcT1212AY.470.000373
ORF1ab/nsp15A1-B308S308ATccGcc1212B0.001534
ORF1ab/nsp15A1-B308S308StcCtcT912B.1.1.5190.000357
ORF1ab/nsp15A1-B308S308StcCtcA312B.1.1.5190.000119
ORF1ab/nsp15A1-B308S308StcCtcT1212B.1.2430.000835
ORF1ab/nsp15A1-B308S308StcCtcT912B.1.3510.000268
ORF1ab/nsp15A1-B308S308StcCtcA312B.1.3510.000089
ORF1ab/nsp15A1-B308S308StcCtcT1212B.1.5260.000282
ORF1ab/nsp15A1-B308S308StcCtcT1212D.20.0009
ORF1ab/nsp15A1-B308S308StcCtcT1111AY.1190.000388
ORF1ab/nsp15A1-B308S308StcCtcT1011AY.390.000247
ORF1ab/nsp15A1-B308S308StcCtcA111AY.390.000025
ORF1ab/nsp15A1-B308S308ATccGcc1111B.1.1.2140.00061
ORF1ab/nsp15A1-B308S308delTCC---1111B.1.1.70.00001
ORF1ab/nsp15A1-B308S308StcCtcT1111B.1.258.140.010784
ORF1ab/nsp15A1-B308S308StcCtcT1111B.1.4270.000555
ORF1ab/nsp15A1-B308S308YtCctAc1111B.1.617.20.000041
ORF1ab/nsp15A1-B308S308del1tCct-c710All0.000001
ORF1ab/nsp15A1-B308S308del1Tcc-cc110All0
ORF1ab/nsp15A1-B308S308del1tCCt-N110All0
ORF1ab/nsp15A1-B308S308del1TcC-cT110All0
ORF1ab/nsp15A1-B308S308FtCctTc1010B.1.10.000181
ORF1ab/nsp15A1-B308S308StcCtcA1010P.1.10.003177
ORF1ab/nsp15A1-B308S308StcCtcT79AY.60.000288
ORF1ab/nsp15A1-B308S308StcCtcA29AY.60.000082
ORF1ab/nsp15A1-B308S308StcCtcT99B.1.1.1860.030928
ORF1ab/nsp15A1-B308S308FtCctTc99B.1.1.2210.090909
ORF1ab/nsp15A1-B308S308StcCtcT99B.1.1.2210.090909
ORF1ab/nsp15A1-B308S308StcCtcT69B.1.2210.000426
ORF1ab/nsp15A1-B308S308StcCtcA39B.1.2210.000213
ORF1ab/nsp15A1-B308S308StcCtcT99B.1.5250.001018
ORF1ab/nsp15A1-B308S308FtCctTc99B.1.5960.000784
ORF1ab/nsp15A1-B308S308delTCC---880.444444
ORF1ab/nsp15A1-B308S308StcCtcT88AY.260.000226
ORF1ab/nsp15A1-B308S308FtCctTc88AY.330.000534
ORF1ab/nsp15A1-B308S308StcCtcT88B.1.1.3060.003507
ORF1ab/nsp15A1-B308S308StcCtcT88B.1.3660.039024
ORF1ab/nsp15A1-B308S308StcCtcT88B.1.6210.000708
ORF1ab/nsp15A1-B308S308StcCtcT77AY.1000.000322
ORF1ab/nsp15A1-B308S308StcCtcT77AY.20.002493
ORF1ab/nsp15A1-B308S308FtCctTc77AY.230.000488
ORF1ab/nsp15A1-B308S308PTccCcc77B.10.000064
ORF1ab/nsp15A1-B308S308StcCtcA57B.1.5960.000436
ORF1ab/nsp15A1-B308S308StcCtcT27B.1.5960.000174
ORF1ab/nsp15A1-B308S308FtCctTc66AY.440.000037
ORF1ab/nsp15A1-B308S308StcCtcT66AY.50.000124
ORF1ab/nsp15A1-B308S308StcCtcT56AY.75.10.000902
ORF1ab/nsp15A1-B308S308StcCtcA16AY.75.10.00018
ORF1ab/nsp15A1-B308S308StcCtcT66B.1.1.4320.007595
ORF1ab/nsp15A1-B308S308StcCtcT66B.1.2580.000399
ORF1ab/nsp15A1-B308S308FtCctTc55AY.260.000142
ORF1ab/nsp15A1-B308S308StcCtcT55AY.270.000324
ORF1ab/nsp15A1-B308S308StcCtcT55AY.330.000334
ORF1ab/nsp15A1-B308S308StcCtcT55AY.4.50.000537
ORF1ab/nsp15A1-B308S308StcCtcT55AY.90.000338
ORF1ab/nsp15A1-B308S308FtCctTc55B.10.000046
ORF1ab/nsp15A1-B308S308ATccGcc55B.1.1.5190.000199
ORF1ab/nsp15A1-B308S308FtCctTc55B.1.2210.000355
ORF1ab/nsp15A1-B308S308StcCtcT55B.1.2410.004058
ORF1ab/nsp15A1-B308S308FtCctTc55B.1.36.360.00301
ORF1ab/nsp15A1-B308S308FtCctTc55B.1.3690.001426
ORF1ab/nsp15A1-B308S308del2tCCt--44All0.000001
ORF1ab/nsp15A1-B308S308StcCtcT34AY.1130.000427
ORF1ab/nsp15A1-B308S308StcCtcA14AY.1130.000142
ORF1ab/nsp15A1-B308S308ATccGcc44AY.250.000024
ORF1ab/nsp15A1-B308S308FtCctTc44AY.250.000024
ORF1ab/nsp15A1-B308S308ATccGcc44AY.440.000024
ORF1ab/nsp15A1-B308S308StcCtcT44AY.46.40.000658
ORF1ab/nsp15A1-B308S308StcCtcT44AY.9.10.000335
ORF1ab/nsp15A1-B308S308StcCtcT34AY.980.000237
ORF1ab/nsp15A1-B308S308StcCtcA14AY.980.000079
ORF1ab/nsp15A1-B308S308StcCtcT44AY.98.10.000194
ORF1ab/nsp15A1-B308S308StcCtcT34B.1.1.280.000934
ORF1ab/nsp15A1-B308S308StcCtcA14B.1.1.280.000311
ORF1ab/nsp15A1-B308S308StcCtcT44B.1.1.3180.001207
ORF1ab/nsp15A1-B308S308StcCtcT44B.1.1.390.002039
ORF1ab/nsp15A1-B308S308FtCctTc44B.1.1.4320.005063
ORF1ab/nsp15A1-B308S308StcCtcT44B.1.1110.0047
ORF1ab/nsp15A1-B308S308FtCctTc44B.1.2580.000266
ORF1ab/nsp15A1-B308S308StcCtcT44B.1.2650.005083
ORF1ab/nsp15A1-B308S308FtCctTc44B.1.5160.007828
ORF1ab/nsp15A1-B308S308FtCctTc44B.1.617.10.000516
ORF1ab/nsp15A1-B308S308FtCctTc44P.10.000063
ORF1ab/nsp15A1-B308S308StcCtcT34R.10.00027
ORF1ab/nsp15A1-B308S308StcCtcA14R.10.00009
ORF1ab/nsp15A1-B308S308StcCtcT33AD.20.000657
ORF1ab/nsp15A1-B308S308FtCctTc33AY.1020.00008
ORF1ab/nsp15A1-B308S308StcCtcT33AY.1060.001005
ORF1ab/nsp15A1-B308S308TTccAcc33AY.250.000018
ORF1ab/nsp15A1-B308S308delTCC---33AY.40.000005
ORF1ab/nsp15A1-B308S308delTCC---33AY.4.50.000322
ORF1ab/nsp15A1-B308S308FtCctTc33AY.430.000013
ORF1ab/nsp15A1-B308S308StcCtcT33AY.460.000312
ORF1ab/nsp15A1-B308S308StcCtcT33AY.710.001425
ORF1ab/nsp15A1-B308S308StcCtcT33AY.750.000168
ORF1ab/nsp15A1-B308S308StcCtcT33AY.840.001312
ORF1ab/nsp15A1-B308S308StcCtcT23AY.9.20.000073
ORF1ab/nsp15A1-B308S308StcCtcA13AY.9.20.000037
ORF1ab/nsp15A1-B308S308StcCtcT33AY.920.000862
ORF1ab/nsp15A1-B308S308FtCctTc33AY.980.000237
ORF1ab/nsp15A1-B308S308StcCtcA33AY.99.20.000276
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.1.2160.002671
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.1.3170.001235
ORF1ab/nsp15A1-B308S308del2tCCt--33B.1.1.70.000003
ORF1ab/nsp15A1-B308S308PTccCcc23B.1.1.70.000002
ORF1ab/nsp15A1-B308S308PTcCCcT13B.1.1.70.000001
ORF1ab/nsp15A1-B308S308FtCctTc33B.1.160.260.007264
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.177.520.005272
ORF1ab/nsp15A1-B308S308TTccAcc33B.1.20.000026
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.360.000438
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.4000.001287
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.4040.003906
ORF1ab/nsp15A1-B308S308FtCctTc33B.1.4290.000071
ORF1ab/nsp15A1-B308S308ATccGcc33B.1.617.10.000387
ORF1ab/nsp15A1-B308S308del1tCct-c33B.1.617.20.000011
ORF1ab/nsp15A1-B308S308ATccGcc33B.1.617.20.000011
ORF1ab/nsp15A1-B308S308StcCtcT33B.1.9.40.018405
ORF1ab/nsp15A1-B308S308StcCtcT33P.1.70.000958
ORF1ab/nsp15A1-B308S308StcCtcT33P.20.00056
ORF1ab/nsp15A1-B308S308StcCtcT23Q.80.00033
ORF1ab/nsp15A1-B308S308StcCtcA13Q.80.000165
ORF1ab/nsp15A1-B308S308StcCtcA12A.2.50.000499
ORF1ab/nsp15A1-B308S308StcCtcT12A.2.50.000499
ORF1ab/nsp15A1-B308S308ITCcATc22All0
ORF1ab/nsp15A1-B308S308TTccAcc22AY.1030.000012
ORF1ab/nsp15A1-B308S308StcCtcT22AY.1110.000366
ORF1ab/nsp15A1-B308S308FtCctTc22AY.116.10.000623
ORF1ab/nsp15A1-B308S308StcCtcT22AY.1210.000271
ORF1ab/nsp15A1-B308S308StcCtcA22AY.130.000322
ORF1ab/nsp15A1-B308S308StcCtcT22AY.160.000759
ORF1ab/nsp15A1-B308S308StcCtcT22AY.16.10.00094
ORF1ab/nsp15A1-B308S308StcCtcT22AY.230.000139
ORF1ab/nsp15A1-B308S308FtCctTc22AY.270.000129
ORF1ab/nsp15A1-B308S308StcCtcT12AY.3.10.000085
ORF1ab/nsp15A1-B308S308StcCtcA12AY.3.10.000085
ORF1ab/nsp15A1-B308S308FtCctTc22AY.340.000194
ORF1ab/nsp15A1-B308S308StcCtcT22AY.340.000194
ORF1ab/nsp15A1-B308S308YtCctAc22AY.430.000009
ORF1ab/nsp15A1-B308S308FtCctTc22AY.620.000871
ORF1ab/nsp15A1-B308S308StcCtcT22AY.880.001768
ORF1ab/nsp15A1-B308S308FtCctTc22AY.940.000885
ORF1ab/nsp15A1-B308S308StcCtcT22AY.990.002099
ORF1ab/nsp15A1-B308S308StcCtcT22B0.000256
ORF1ab/nsp15A1-B308S308FtCctTc22B.1.1.10.000653
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.1.1410.004024
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.1.5260.007092
ORF1ab/nsp15A1-B308S308ATccGcc22B.1.1.70.000002
ORF1ab/nsp15A1-B308S308YtCctAc22B.1.1.70.000002
ORF1ab/nsp15A1-B308S308del1tCCt-N12B.1.1.70.000001
ORF1ab/nsp15A1-B308S308del1TcC-cT12B.1.1.70.000001
ORF1ab/nsp15A1-B308S308delTCC---22B.1.1.700.000682
ORF1ab/nsp15A1-B308S308TTccAcc22B.1.1770.000026
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.177.100.001756
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.177.150.001262
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.177.810.000379
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.177.860.000367
ORF1ab/nsp15A1-B308S308delTCC---22B.1.20.000018
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.2060.001631
ORF1ab/nsp15A1-B308S308delTCC---22B.1.2580.000133
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.258.110.000793
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.3460.002621
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.36.180.00084
ORF1ab/nsp15A1-B308S308YtCctAc22B.1.36.310.003503
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.4250.005988
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.438.10.000215
ORF1ab/nsp15A1-B308S308StcCtcT22B.1.617.10.000258
ORF1ab/nsp15A1-B308S308delTCC---22B.1.617.20.000008
ORF1ab/nsp15A1-B308S308StcCtcT22P.1.140.000096
ORF1ab/nsp15A1-B308S308StcCtcT22Q.30.00029
ORF1ab/nsp15A1-B308S308delTCC---11A0.000387
ORF1ab/nsp15A1-B308S308StcCtcT11A.20.000662
ORF1ab/nsp15A1-B308S308StcCtcT11A.2.40.003367
ORF1ab/nsp15A1-B308S308StcCtcT11A.270.001656
ORF1ab/nsp15A1-B308S308YtCctAc11AD.20.000219
ORF1ab/nsp15A1-B308S308StcCtcT11AL.10.012987
ORF1ab/nsp15A1-B308S308LTCCCTT11All0
ORF1ab/nsp15A1-B308S308XtCCtGA11All0
ORF1ab/nsp15A1-B308S308ATccGcc11AY.1020.000027
ORF1ab/nsp15A1-B308S308YtCctAc11AY.1030.000006
ORF1ab/nsp15A1-B308S308StcCtcT11AY.1050.000643
ORF1ab/nsp15A1-B308S308StcCtcT11AY.1080.001103
ORF1ab/nsp15A1-B308S308StcCtcT11AY.1160.000287
ORF1ab/nsp15A1-B308S308FtCctTc11AY.1170.000085
ORF1ab/nsp15A1-B308S308StcCtcT11AY.1170.000085
ORF1ab/nsp15A1-B308S308TTccAcc11AY.1190.000035
ORF1ab/nsp15A1-B308S308StcCtcT11AY.1200.000037
ORF1ab/nsp15A1-B308S308FtCctTc11AY.1200.000037
ORF1ab/nsp15A1-B308S308StcCtcT11AY.120.10.000321
ORF1ab/nsp15A1-B308S308StcCtcT11AY.120.20.001285
ORF1ab/nsp15A1-B308S308StcCtcT11AY.140.000088
ORF1ab/nsp15A1-B308S308FtCctTc11AY.16.10.00047
ORF1ab/nsp15A1-B308S308ATccGcc11AY.200.000039
ORF1ab/nsp15A1-B308S308ATccGcc11AY.230.00007
ORF1ab/nsp15A1-B308S308del1tCct-c11AY.250.000006
ORF1ab/nsp15A1-B308S308TTccAcc11AY.260.000028
ORF1ab/nsp15A1-B308S308FtCctTc11AY.30.00001
ORF1ab/nsp15A1-B308S308delTCC---11AY.30.00001
ORF1ab/nsp15A1-B308S308StcCtcT11AY.34.10.00051
ORF1ab/nsp15A1-B308S308FtCctTc11AY.360.000148
ORF1ab/nsp15A1-B308S308delTCC---11AY.360.000148
ORF1ab/nsp15A1-B308S308StcCtcT11AY.370.000316
ORF1ab/nsp15A1-B308S308StcCtcT11AY.39.10.00004
ORF1ab/nsp15A1-B308S308StcCtcA11AY.39.1.10.000725
ORF1ab/nsp15A1-B308S308TTccAcc11AY.40.000002
ORF1ab/nsp15A1-B308S308PTccCcc11AY.40.000002
ORF1ab/nsp15A1-B308S308ATccGcc11AY.4.2.10.000149
ORF1ab/nsp15A1-B308S308FtCctTc11AY.4.2.10.000149
ORF1ab/nsp15A1-B308S308YtCctAc11AY.420.00004
ORF1ab/nsp15A1-B308S308TTccAcc11AY.430.000004
ORF1ab/nsp15A1-B308S308delTCC---11AY.430.000004
ORF1ab/nsp15A1-B308S308LTCCCTT11AY.440.000006
ORF1ab/nsp15A1-B308S308XtCCtGA11AY.440.000006
ORF1ab/nsp15A1-B308S308TTccAcc11AY.440.000006
ORF1ab/nsp15A1-B308S308delTCC---11AY.440.000006
ORF1ab/nsp15A1-B308S308StcCtcT11AY.450.000122
ORF1ab/nsp15A1-B308S308FtCctTc11AY.470.000031
ORF1ab/nsp15A1-B308S308StcCtcT11AY.480.000465
ORF1ab/nsp15A1-B308S308delTCC---11AY.50.000021
ORF1ab/nsp15A1-B308S308StcCtcA11AY.520.000814
ORF1ab/nsp15A1-B308S308YtCctAc11AY.530.000288
ORF1ab/nsp15A1-B308S308StcCtcT11AY.540.000095
ORF1ab/nsp15A1-B308S308StcCtcA11AY.550.000917
ORF1ab/nsp15A1-B308S308StcCtcT11AY.590.00053
ORF1ab/nsp15A1-B308S308StcCtcT11AY.620.000436
ORF1ab/nsp15A1-B308S308StcCtcT11AY.650.000533
ORF1ab/nsp15A1-B308S308StcCtcT11AY.670.000464
ORF1ab/nsp15A1-B308S308StcCtcT11AY.70.000196
ORF1ab/nsp15A1-B308S308FtCctTc11AY.7.10.000113
ORF1ab/nsp15A1-B308S308FtCctTc11AY.750.000056
ORF1ab/nsp15A1-B308S308StcCtcT11AY.850.000427
ORF1ab/nsp15A1-B308S308StcCtcT11AY.860.00083
ORF1ab/nsp15A1-B308S308StcCtcT11AY.930.000273
ORF1ab/nsp15A1-B308S308del1tCct-c11AY.980.000079
ORF1ab/nsp15A1-B308S308FtCctTc11AY.98.10.000048
ORF1ab/nsp15A1-B308S308StcCtcT11AZ.10.000867
ORF1ab/nsp15A1-B308S308FtCctTc11B0.000128
ORF1ab/nsp15A1-B308S308YtCctAc11B.10.000009
ORF1ab/nsp15A1-B308S308ATccGcc11B.10.000009
ORF1ab/nsp15A1-B308S308del2tCCt--11B.1.10.000018
ORF1ab/nsp15A1-B308S308TTccAcc11B.1.10.000018
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.120.007463
ORF1ab/nsp15A1-B308S308delTCC---11B.1.1.1590.004673
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2140.000055
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2170.003636
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2220.000204
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.250.000569
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2620.015152
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2650.003155
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2660.012195
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.2750.011236
ORF1ab/nsp15A1-B308S308YtCctAc11B.1.1.280.000311
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.1.280.000311
ORF1ab/nsp15A1-B308S308delTCC---11B.1.1.3110.000358
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.3110.000358
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.340.013158
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.3480.000796
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.1.3480.000796
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.1.370.000193
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.1.3720.000689
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.3720.000689
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.3740.002375
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.1.4160.000905
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.4340.000349
ORF1ab/nsp15A1-B308S308YtCctAc11B.1.1.460.004367
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.490.017544
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.1.5250.005464
ORF1ab/nsp15A1-B308S308TTcCAcT11B.1.1.70.000001
ORF1ab/nsp15A1-B308S308PTccCcc11B.1.1470.000756
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.160.160.000929
ORF1ab/nsp15A1-B308S308PTccCcc11B.1.160.260.002421
ORF1ab/nsp15A1-B308S308delTCC---11B.1.160.70.002079
ORF1ab/nsp15A1-B308S308delTCC---11B.1.1770.000013
ORF1ab/nsp15A1-B308S308PTccCcc11B.1.1770.000013
ORF1ab/nsp15A1-B308S308delTCC---11B.1.177.180.00116
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.177.40.000211
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.177.540.000606
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.177.600.000218
ORF1ab/nsp15A1-B308S308delTCC---11B.1.177.690.001484
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.177.70.000165
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.177.750.001041
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.177.810.000189
ORF1ab/nsp15A1-B308S308delTCC---11B.1.177.830.001481
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.177.870.000728
ORF1ab/nsp15A1-B308S308ITCcATc11B.1.20.000009
ORF1ab/nsp15A1-B308S308PTccCcc11B.1.20.000009
ORF1ab/nsp15A1-B308S308del1tCct-c11B.1.20.000009
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.2100.002132
ORF1ab/nsp15A1-B308S308ATccGcc11B.1.2140.003663
ORF1ab/nsp15A1-B308S308PTccCcc11B.1.2290.009709
ORF1ab/nsp15A1-B308S308delTCC---11B.1.230.006061
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.2430.00007
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.258.170.000104
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.3380.008621
ORF1ab/nsp15A1-B308S308YtCctAc11B.1.3510.00003
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.351.20.000303
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.36.170.000494
ORF1ab/nsp15A1-B308S308del1Tcc-cc11B.1.36.290.000517
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.36.360.000602
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.3610.001289
ORF1ab/nsp15A1-B308S308ITCcATc11B.1.3690.000285
ORF1ab/nsp15A1-B308S308TTccAcc11B.1.3690.000285
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.3960.000706
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.4090.000781
ORF1ab/nsp15A1-B308S308YtCctAc11B.1.4110.003704
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.4260.001009
ORF1ab/nsp15A1-B308S308TTccAcc11B.1.4290.000024
ORF1ab/nsp15A1-B308S308YtCctAc11B.1.4290.000024
ORF1ab/nsp15A1-B308S308ATccGcc11B.1.438.10.000107
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.438.20.019231
ORF1ab/nsp15A1-B308S308FtCctTc11B.1.4430.004673
ORF1ab/nsp15A1-B308S308YtCCtAT11B.1.4460.02
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.4480.002625
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.4590.004082
ORF1ab/nsp15A1-B308S308StcCtcA11B.1.4670.04
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.4700.001404
ORF1ab/nsp15A1-B308S308StcCtcA11B.1.4710.002732
ORF1ab/nsp15A1-B308S308StcCtcA11B.1.4970.000315
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.5090.000866
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.5240.001406
ORF1ab/nsp15A1-B308S308delTCC---11B.1.5260.000024
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.5640.000426
ORF1ab/nsp15A1-B308S308TTccAcc11B.1.564.10.001577
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.5760.000907
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.6090.000479
ORF1ab/nsp15A1-B308S308TTccAcc11B.1.617.20.000004
ORF1ab/nsp15A1-B308S308StcCtcA11B.1.6190.000871
ORF1ab/nsp15A1-B308S308delTCC---11B.1.6200.000946
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.6200.000946
ORF1ab/nsp15A1-B308S308StcCtcT11B.1.6230.000536
ORF1ab/nsp15A1-B308S308ATccGcc11B.1.6280.000352
ORF1ab/nsp15A1-B308S308PTccCcc11B.230.002924
ORF1ab/nsp15A1-B308S308delTCC---11B.340.013699
ORF1ab/nsp15A1-B308S308StcCtcT11B.400.000364
ORF1ab/nsp15A1-B308S308StcCtcT11B.60.00091
ORF1ab/nsp15A1-B308S308StcCtcT11C.40.01
ORF1ab/nsp15A1-B308S308StcCtcT11M.20.083333
ORF1ab/nsp15A1-B308S308del1tCct-c11P.10.000016
ORF1ab/nsp15A1-B308S308YtCctAc11P.1.10.000318
ORF1ab/nsp15A1-B308S308delTCC---11P.1.150.000232
ORF1ab/nsp15A1-B308S308ATccGcc11P.1.150.000232
ORF1ab/nsp15A1-B308S308StcCtcT11P.1.150.000232
ORF1ab/nsp15A1-B308S308StcCtcA11P.1.160.000374
ORF1ab/nsp15A1-B308S308ATccGcc11P.1.170.000162
ORF1ab/nsp15A1-B308S308FtCctTc11P.1.170.000162
ORF1ab/nsp15A1-B308S308StcCtcT11P.1.20.001156
ORF1ab/nsp15A1-B308S308FtCctTc11P.1.20.001156
ORF1ab/nsp15A1-B308S308StcCtcT11P.1.50.076923
ORF1ab/nsp15A1-B308S308delTCC---11P.1.70.000319
ORF1ab/nsp15A1-B308S308StcCtcT11P.1.90.004808
ORF1ab/nsp15A1-B308S308StcCtcT11Q.10.000126