CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 277 | N277N | N6729N | syn | aaC | aaT | 29308 | 29308 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277S | N6729S | nonsyn | aAc | aGc | 150 | 150 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277T | N6729T | nonsyn | aAc | aCc | 95 | 94 | 0.989474 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277T | N6729T | nonsyn | aAC | aCT | 95 | 1 | 0.0105263 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277del | N6729del | del | AAC | --- | 52 | 52 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277D | N6729D | nonsyn | Aac | Gac | 52 | 52 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277Y | N6729Y | nonsyn | Aac | Tac | 23 | 23 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277K | N6729K | nonsyn | aaC | aaA | 15 | 8 | 0.533333 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277K | N6729K | nonsyn | aaC | aaG | 15 | 7 | 0.466667 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277I | N6729I | nonsyn | aAc | aTc | 8 | 8 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277R | N6729R | nonsyn | aAC | aGG | 7 | 7 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277H | N6729H | nonsyn | Aac | Cac | 4 | 4 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277X | N6729X | nonsyn | AaC | TaG | 1 | 1 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277E | N6729E | nonsyn | AaC | GaA | 1 | 1 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277L | N6729L | nonsyn | AAC | CTT | 1 | 1 | 1 | 20449-20451 |
ORF1ab/nsp15A1-B | 277 | N277F | N6729F | nonsyn | AAc | TTc | 1 | 1 | 1 | 20449-20451 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 29308 | 29308 | All | 0.005606 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 10259 | 10259 | AY.25 | 0.061706 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6723 | 6723 | B.1.258 | 0.447395 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3388 | 3388 | AY.4 | 0.005273 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2476 | 2476 | B.1.258.11 | 0.981371 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 818 | 818 | B.1.617.2 | 0.00308 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 763 | 763 | AY.120 | 0.028367 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 495 | 495 | B.1.1.7 | 0.000443 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 420 | 420 | AY.44 | 0.002556 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 403 | 403 | AY.9 | 0.027241 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 288 | 288 | B.1.2 | 0.002536 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 199 | 199 | B.1.258.9 | 0.995 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 181 | 181 | AY.34 | 0.017551 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 176 | 176 | AY.43 | 0.00078 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 175 | 175 | P.1 | 0.002757 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 150 | 150 | All | 0.000029 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 140 | 140 | B.1.258.19 | 0.992908 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 129 | 129 | AY.103 | 0.000801 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 129 | 129 | B.1.258.21 | 1 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 116 | 116 | AY.54 | 0.01106 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 116 | 116 | B.1.351 | 0.003448 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 115 | 115 | B.1.258.12 | 0.905512 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 113 | 113 | B.1 | 0.001035 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 98 | 98 | AY.53 | 0.028177 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 94 | 95 | All | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277T | aAC | aCT | 1 | 95 | All | 0 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 93 | 93 | AY.98 | 0.007347 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 87 | 87 | B.1.258.10 | 0.988636 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 80 | 80 | AY.4 | 0.000125 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 63 | 63 | B.1.258.20 | 1 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 61 | 61 | B.1.160 | 0.001902 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 53 | 53 | AZ.1 | 0.045967 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 52 | 52 | All | 0.00001 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 52 | 52 | All | 0.00001 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 52 | 52 | B.1.526 | 0.001222 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 49 | 49 | B.1.243 | 0.00341 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 43 | 43 | AY.33 | 0.002871 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 43 | 43 | AY.39.1 | 0.001703 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 41 | 41 | AY.3 | 0.000408 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 39 | 39 | AY.4.2 | 0.000846 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 37 | 37 | B.1.1 | 0.000671 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 36 | 36 | AY.102 | 0.000955 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 36 | 36 | B.1.177.10 | 0.031607 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 34 | 34 | B.1.177 | 0.000448 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 30 | 30 | AY.39 | 0.000741 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 24 | 24 | B.1.602 | 0.156863 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 23 | 23 | All | 0.000004 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 23 | 23 | B.1.1.348 | 0.018312 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 20 | 20 | AY.100 | 0.00092 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 20 | 20 | B.1.1.7 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 19 | 19 | AY.41 | 0.005585 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 19 | 19 | B.1.1.519 | 0.000755 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 17 | 17 | AY.3.1 | 0.001449 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 17 | 17 | AY.5 | 0.000351 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 17 | 17 | AY.92 | 0.004884 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 17 | 17 | B.1.621 | 0.001505 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 16 | 16 | AY.3 | 0.000159 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 16 | 16 | B.1.627 | 0.032323 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 8 | 15 | All | 0.000002 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaG | 7 | 15 | All | 0.000001 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 15 | 15 | AY.47 | 0.000467 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 14 | 14 | AY.119 | 0.000494 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 14 | 14 | AY.51 | 0.012727 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 14 | 14 | B.1.199 | 0.057851 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 14 | 14 | B.1.404 | 0.018229 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 13 | 13 | B.1.1.317 | 0.005352 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 13 | 13 | B.1.617.2 | 0.000049 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 12 | 12 | AY.20 | 0.000466 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 12 | 12 | AY.7 | 0.002352 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 12 | 12 | B.1.429 | 0.000282 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 11 | 11 | AY.117 | 0.00093 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 11 | 11 | B.1.258.14 | 0.010784 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 11 | 11 | C.37 | 0.001277 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 10 | 10 | B.1.1.7 | 0.000009 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 10 | 10 | Q.1 | 0.001263 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 9 | 9 | B.1.231 | 0.290323 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 9 | 9 | P.1.14 | 0.00043 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 9 | 9 | P.1.7 | 0.002874 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 8 | 8 | 0.444444 | |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 8 | 8 | A | 0.003096 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 8 | 8 | All | 0.000002 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 8 | 8 | AY.23 | 0.000558 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 8 | 8 | AY.32 | 0.00426 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 8 | 8 | AY.5.4 | 0.002214 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 8 | 8 | AY.69 | 0.001493 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 8 | 8 | B.1 | 0.000073 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 8 | 8 | P.1 | 0.000126 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 8 | 8 | P.1.4 | 0.007812 |
ORF1ab/nsp15A1-B | 277 | N277R | aAC | aGG | 7 | 7 | All | 0.000001 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 7 | 7 | AY.26 | 0.000198 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 7 | 7 | AY.46 | 0.000729 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 7 | 7 | B.1.177.79 | 0.016393 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 7 | 7 | B.1.349 | 0.005004 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 7 | 7 | B.1.400 | 0.003003 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 6 | 6 | AY.103 | 0.000037 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6 | 6 | AY.30 | 0.002374 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6 | 6 | AY.42 | 0.000241 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6 | 6 | AY.93 | 0.001638 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6 | 6 | B | 0.000767 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6 | 6 | B.1.258.17 | 0.000624 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 6 | 6 | B.1.619 | 0.005226 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 5 | 5 | AY.100 | 0.00023 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | AY.114 | 0.001156 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | AY.96 | 0.010373 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 5 | 5 | B | 0.000639 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 3 | 5 | B.1 | 0.000027 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaG | 2 | 5 | B.1 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | B.1.1.222 | 0.00102 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | B.1.177.57 | 0.001405 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | L.3 | 0.01773 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 5 | 5 | Q.3 | 0.000725 |
ORF1ab/nsp15A1-B | 277 | N277H | Aac | Cac | 4 | 4 | All | 0.000001 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | AY.118 | 0.000251 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | AY.120.1 | 0.001284 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | AY.13 | 0.000644 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | AY.14 | 0.000352 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | B.1.1.153 | 0.004381 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | B.1.1.358 | 0.137931 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | B.1.311 | 0.001098 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 3 | 3 | A.23.1 | 0.002113 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.104 | 0.005952 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.57 | 0.001969 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.7.2 | 0.001678 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | AY.82 | 0.004071 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaG | 3 | 3 | B | 0.000383 |
ORF1ab/nsp15A1-B | 277 | N277R | aAC | aGG | 3 | 3 | B | 0.000383 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.1.312 | 0.005736 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 3 | 3 | B.1.1.519 | 0.000119 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 3 | 3 | B.1.177.32 | 0.004049 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.177.6 | 0.00293 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.177.86 | 0.00055 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.279 | 0.001541 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.459 | 0.012245 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.541 | 0.013274 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.558 | 0.013699 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.560 | 0.013889 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 2 | 2 | A | 0.000774 |
ORF1ab/nsp15A1-B | 277 | N277R | aAC | aGG | 2 | 2 | A | 0.000774 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AE.8 | 0.000978 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp15A1-B | 277 | N277R | aAC | aGG | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.1.231 | 0.006192 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.160.27 | 0.030303 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.177.32 | 0.002699 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.177.62 | 0.002384 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.258.24 | 0.021505 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.258.6 | 0.039216 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.265 | 0.002541 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.351.2 | 0.000605 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.411 | 0.007407 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.426 | 0.002018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | P.1.6 | 0.003891 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 1 | 1 | 0.055556 | |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaG | 1 | 1 | A | 0.000387 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | A.22 | 0.066667 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AE.4 | 0.043478 |
ORF1ab/nsp15A1-B | 277 | N277X | AaC | TaG | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 277 | N277E | AaC | GaA | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 277 | N277L | AAC | CTT | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 277 | N277F | AAc | TTc | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp15A1-B | 277 | N277H | Aac | Cac | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 277 | N277E | AaC | GaA | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 277 | N277L | AAC | CTT | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277H | Aac | Cac | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.219 | 0.005 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.349 | 0.010309 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp15A1-B | 277 | N277F | AAc | TTc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.521 | 0.005348 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp15A1-B | 277 | N277H | Aac | Cac | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | B.1.177.80 | 0.001912 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp15A1-B | 277 | N277T | aAc | aCc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.258.15 | 0.018868 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.258.22 | 0.002667 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp15A1-B | 277 | N277I | aAc | aTc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | B.1.385 | 0.010638 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp15A1-B | 277 | N277H | Aac | Cac | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.596.1 | 0.009346 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp15A1-B | 277 | N277T | aAC | aCT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 277 | N277K | aaC | aaA | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp15A1-B | 277 | N277del | AAC | --- | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.626 | 0.005714 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp15A1-B | 277 | N277X | AaC | TaG | 1 | 1 | B.4.4 | 0.018868 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp15A1-B | 277 | N277Y | Aac | Tac | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | C.36.2 | 0.034483 |
ORF1ab/nsp15A1-B | 277 | N277D | Aac | Gac | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 277 | N277S | aAc | aGc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | P.1.9 | 0.004808 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | W.4 | 0.001351 |
ORF1ab/nsp15A1-B | 277 | N277N | aaC | aaT | 1 | 1 | Z.1 | 0.00289 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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