CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 272 | D272D | D6724D | syn | gaC | gaT | 6382 | 6382 | 1 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272N | D6724N | nonsyn | Gac | Aac | 517 | 517 | 1 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272Y | D6724Y | nonsyn | Gac | Tac | 375 | 373 | 0.994667 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272Y | D6724Y | nonsyn | GaC | TaT | 375 | 2 | 0.00533333 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272del | D6724del | del | GAC | --- | 39 | 39 | 1 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272A | D6724A | nonsyn | gAc | gCc | 27 | 25 | 0.925926 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272A | D6724A | nonsyn | gAC | gCG | 27 | 1 | 0.037037 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272A | D6724A | nonsyn | gAC | gCA | 27 | 1 | 0.037037 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272E | D6724E | nonsyn | gaC | gaA | 24 | 21 | 0.875 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272E | D6724E | nonsyn | gaC | gaG | 24 | 3 | 0.125 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272G | D6724G | nonsyn | gAc | gGc | 18 | 13 | 0.722222 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272G | D6724G | nonsyn | gAC | gGA | 18 | 3 | 0.166667 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272G | D6724G | nonsyn | gAC | gGT | 18 | 2 | 0.111111 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272V | D6724V | nonsyn | gAc | gTc | 15 | 7 | 0.466667 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272V | D6724V | nonsyn | gAC | gTT | 15 | 6 | 0.4 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272V | D6724V | nonsyn | gAC | gTA | 15 | 2 | 0.133333 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272del1 | D6724del1 | del | gaC | ga- | 8 | 8 | 1 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272H | D6724H | nonsyn | Gac | Cac | 6 | 5 | 0.833333 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272H | D6724H | nonsyn | GaC | CaT | 6 | 1 | 0.166667 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272X | D6724X | nonsyn | GaC | TaA | 4 | 2 | 0.5 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272X | D6724X | nonsyn | GAC | TGA | 4 | 2 | 0.5 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272del2 | D6724del2 | del | gAC | g-- | 3 | 3 | 1 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272C | D6724C | nonsyn | GAc | TGc | 3 | 2 | 0.666667 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272F | D6724F | nonsyn | GAC | TTT | 3 | 2 | 0.666667 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272F | D6724F | nonsyn | GAc | TTc | 3 | 1 | 0.333333 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272C | D6724C | nonsyn | GAC | TGT | 3 | 1 | 0.333333 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272L | D6724L | nonsyn | GAC | TTA | 2 | 1 | 0.5 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272L | D6724L | nonsyn | GAC | CTT | 2 | 1 | 0.5 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272T | D6724T | nonsyn | GAC | ACA | 2 | 1 | 0.5 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272T | D6724T | nonsyn | GAC | ACT | 2 | 1 | 0.5 | 20434-20436 |
ORF1ab/nsp15A1-B | 272 | D272I | D6724I | nonsyn | GAC | ATT | 1 | 1 | 1 | 20434-20436 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6382 | 6382 | All | 0.001221 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1607 | 1607 | AY.1 | 0.635932 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1050 | 1050 | B.1.1.7 | 0.00094 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 517 | 517 | All | 0.000099 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 376 | 376 | B.1.617.2 | 0.001416 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 373 | 375 | All | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272Y | GaC | TaT | 2 | 375 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 343 | 343 | AY.4 | 0.000534 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 270 | 270 | AY.43 | 0.001196 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 268 | 268 | AY.39 | 0.006623 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 253 | 253 | P.4 | 0.961977 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 223 | 223 | AY.103 | 0.001385 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 175 | 175 | B.1.1 | 0.003175 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 138 | 138 | Q.3 | 0.020015 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 125 | 125 | B.1.177.86 | 0.022932 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 123 | 123 | B.1.177 | 0.00162 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 109 | 109 | AY.4 | 0.00017 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 109 | 109 | AY.98 | 0.00861 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 93 | 93 | B.1.2 | 0.000819 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 77 | 77 | P.1 | 0.001213 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 63 | 63 | AY.44 | 0.000383 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 63 | 63 | B.1.427 | 0.003181 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 58 | 58 | B.1 | 0.000531 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 55 | 55 | P.1 | 0.000866 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 49 | 49 | AY.120 | 0.001822 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 49 | 49 | B.1.466.2 | 0.019171 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 48 | 48 | AY.3 | 0.000477 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 46 | 46 | B.1.1.7 | 0.000041 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 42 | 42 | AY.25 | 0.000253 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 41 | 41 | AY.75 | 0.002297 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 39 | 39 | All | 0.000007 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 39 | 39 | AY.117 | 0.003296 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 39 | 39 | AY.44 | 0.000237 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 39 | 39 | B.1.1.37 | 0.007522 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 35 | 35 | AY.69 | 0.006534 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 35 | 35 | B.1.258.17 | 0.003639 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 34 | 34 | AY.23 | 0.002371 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 33 | 33 | B.1.351.2 | 0.009985 |
ORF1ab/nsp15A1-B | 272 | D272A | gAc | gCc | 25 | 27 | All | 0.000005 |
ORF1ab/nsp15A1-B | 272 | D272A | gAC | gCA | 1 | 27 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272A | gAC | gCG | 1 | 27 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 27 | 27 | B.1.1 | 0.00049 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 25 | 25 | B.1.1.7 | 0.000022 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 24 | 25 | B.1.221 | 0.001705 |
ORF1ab/nsp15A1-B | 272 | D272Y | GaC | TaT | 1 | 25 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 21 | 24 | All | 0.000004 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaG | 3 | 24 | All | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 23 | 23 | AY.4.2 | 0.000499 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 22 | 22 | AY.4 | 0.000034 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 21 | 21 | AY.39.1 | 0.000832 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 21 | 21 | AY.5 | 0.000434 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 20 | 20 | B.1.177.57 | 0.00562 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 13 | 18 | All | 0.000002 |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGA | 3 | 18 | All | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGT | 2 | 18 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 18 | 18 | AY.36 | 0.002668 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 18 | 18 | AY.42 | 0.000724 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 17 | 17 | AY.11 | 0.022758 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 17 | 17 | AY.46.5 | 0.003373 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 17 | 17 | B.1.160 | 0.00053 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 16 | 16 | AY.118 | 0.001002 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 7 | 15 | All | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTT | 6 | 15 | All | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTA | 2 | 15 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 15 | 15 | AY.61 | 0.001572 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 15 | 15 | AY.7.2 | 0.008389 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 15 | 15 | B.1.1.519 | 0.000596 |
ORF1ab/nsp15A1-B | 272 | D272A | gAc | gCc | 14 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp15A1-B | 272 | D272A | gAC | gCG | 1 | 15 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 14 | 14 | AY.43 | 0.000062 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 13 | 13 | AY.3 | 0.000129 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 13 | 13 | AY.44 | 0.000079 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 13 | 13 | AY.45 | 0.001582 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 13 | 13 | AY.68 | 0.003559 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 13 | 13 | B.1.617.2 | 0.000049 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 12 | 12 | AY.33 | 0.000801 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 12 | 12 | C.37 | 0.001393 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 11 | 11 | AY.102 | 0.000292 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 11 | 11 | AY.26 | 0.000311 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 11 | 11 | AY.3 | 0.000109 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 11 | 11 | B.1.429 | 0.000259 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 11 | 11 | B.1.621 | 0.000974 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 10 | 10 | B.1.221 | 0.00071 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 9 | 9 | AY.120 | 0.000335 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 9 | 9 | AY.19 | 0.010262 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 9 | 9 | AY.37 | 0.002845 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 9 | 9 | B.1.177 | 0.000119 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 9 | 9 | B.1.2 | 0.000079 |
ORF1ab/nsp15A1-B | 272 | D272A | gAc | gCc | 9 | 9 | B.1.438.1 | 0.000965 |
ORF1ab/nsp15A1-B | 272 | D272del1 | gaC | ga- | 8 | 8 | All | 0.000002 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 8 | 8 | AY.43 | 0.000035 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 8 | 8 | B.1.177.15 | 0.005047 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 8 | 8 | B.1.177.44 | 0.004152 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 8 | 8 | B.1.240 | 0.001725 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 8 | 8 | B.1.258 | 0.000532 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 7 | 7 | AY.29 | 0.00011 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 7 | 7 | B.1.264.1 | 0.333333 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 6 | 6 | 0.333333 | |
ORF1ab/nsp15A1-B | 272 | D272H | Gac | Cac | 5 | 6 | All | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272H | GaC | CaT | 1 | 6 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6 | 6 | AY.100 | 0.000276 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6 | 6 | AY.113 | 0.000854 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6 | 6 | AY.20 | 0.000233 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6 | 6 | AY.4.2.1 | 0.000894 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6 | 6 | B.1.1.159 | 0.028037 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 6 | 6 | B.1.1.70 | 0.002046 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 6 | 6 | B.1.177.12 | 0.00091 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | AY.121 | 0.000677 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | AY.5.3 | 0.001687 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | AY.86 | 0.004149 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | AY.98 | 0.000395 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 5 | 5 | B.1 | 0.000046 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.1.1 | 0.001633 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 5 | 5 | B.1.1.25 | 0.002843 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.1.351 | 0.013966 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.177.81 | 0.000947 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.36.33 | 0.037879 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.526 | 0.000118 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | B.1.575 | 0.001517 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | C.36.3 | 0.002836 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 5 | 5 | P.1.17 | 0.000809 |
ORF1ab/nsp15A1-B | 272 | D272X | GAC | TGA | 2 | 4 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272X | GaC | TaA | 2 | 4 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 4 | 4 | AY.102 | 0.000106 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 4 | 4 | AY.119 | 0.000141 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | AY.16 | 0.001519 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | AY.29 | 0.000063 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 4 | 4 | AY.39 | 0.000099 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 4 | 4 | AY.4.3 | 0.003367 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.1.25 | 0.002274 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.1.294 | 0.005063 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.1.528 | 0.019231 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.1.90 | 0.4 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.177.21 | 0.000306 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.177.53 | 0.009569 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.214.2 | 0.002398 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | C.1.2 | 0.017021 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | C.4 | 0.04 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 3 | 0.111111 | |
ORF1ab/nsp15A1-B | 272 | D272Y | GaC | TaT | 1 | 3 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272del2 | gAC | g-- | 3 | 3 | All | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272F | GAC | TTT | 2 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272C | GAc | TGc | 2 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272C | GAC | TGT | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272F | GAc | TTc | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp15A1-B | 272 | D272H | Gac | Cac | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.51 | 0.002727 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | AY.54 | 0.000286 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | B.1.1.464 | 0.004418 |
ORF1ab/nsp15A1-B | 272 | D272del1 | gaC | ga- | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGA | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGT | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTA | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTT | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTT | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTA | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGT | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGA | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 3 | 3 | B.1.243 | 0.000209 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | B.1.545 | 0.043478 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 3 | 3 | B.1.586 | 0.032967 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 3 | 3 | C.30 | 0.005181 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 2 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272X | GAC | TGA | 1 | 2 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272X | GaC | TaA | 1 | 2 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272G | gAC | gGA | 1 | 2 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272L | GAC | TTA | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272T | GAC | ACT | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272L | GAC | CTT | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272T | GAC | ACA | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp15A1-B | 272 | D272H | Gac | Cac | 1 | 2 | AY.59 | 0.00053 |
ORF1ab/nsp15A1-B | 272 | D272H | GaC | CaT | 1 | 2 | AY.59 | 0.00053 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTT | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp15A1-B | 272 | D272del2 | gAC | g-- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 272 | D272F | GAC | TTT | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272X | GAC | TGA | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272F | GAc | TTc | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272C | GAc | TGc | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272X | GaC | TaA | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272C | GAC | TGT | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.221.2 | 0.008032 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 2 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTT | 1 | 2 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.574 | 0.004301 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | B.1.620 | 0.001892 |
ORF1ab/nsp15A1-B | 272 | D272del1 | gaC | ga- | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 2 | 2 | W.1 | 0.017391 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272C | GAc | TGc | 1 | 1 | 0.055556 | |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | A | 0.000387 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp15A1-B | 272 | D272I | GAC | ATT | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp15A1-B | 272 | D272del2 | gAC | g-- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp15A1-B | 272 | D272del1 | gaC | ga- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.5.2 | 0.002463 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp15A1-B | 272 | D272A | gAc | gCc | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp15A1-B | 272 | D272A | gAC | gCA | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 272 | D272del1 | gaC | ga- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 272 | D272F | GAC | TTT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 272 | D272L | GAC | CTT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.280 | 0.003086 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 272 | D272del1 | gaC | ga- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.371 | 0.010417 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.412 | 0.007634 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.485 | 0.016667 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.1.487 | 0.005587 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp15A1-B | 272 | D272V | gAc | gTc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272T | GAC | ACA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.30 | 0.002513 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp15A1-B | 272 | D272L | GAC | TTA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.221.1 | 0.002907 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.258.19 | 0.007092 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.276 | 0.016949 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 272 | D272V | gAC | gTT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp15A1-B | 272 | D272H | Gac | Cac | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.400.1 | 0.015152 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.402 | 0.009804 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp15A1-B | 272 | D272T | GAC | ACT | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp15A1-B | 272 | D272I | GAC | ATT | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaG | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaG | 1 | 1 | B.1.452 | 0.013699 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 272 | D272Y | Gac | Tac | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.585 | 0.027778 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaG | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp15A1-B | 272 | D272del | GAC | --- | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | B.45 | 0.003831 |
ORF1ab/nsp15A1-B | 272 | D272G | gAc | gGc | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | C.18 | 0.002591 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp15A1-B | 272 | D272N | Gac | Aac | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp15A1-B | 272 | D272E | gaC | gaA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | P.1.17.1 | 0.000875 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp15A1-B | 272 | D272A | gAc | gCc | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp15A1-B | 272 | D272D | gaC | gaT | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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