CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 263 & Codon = Ctt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B263F263LF6715LnonsynTttCtt11466010.52443320407-20409

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B263F263LTttCtt6011146All0.000115
ORF1ab/nsp15A1-B263F263LTttCtt131131B.1.6320.879195
ORF1ab/nsp15A1-B263F263LTttCtt125125AY.50.002581
ORF1ab/nsp15A1-B263F263LTttCtt84108B.1.1.70.000075
ORF1ab/nsp15A1-B263F263LTttCtt585AY.40.000008
ORF1ab/nsp15A1-B263F263LTttCtt5252B.1.1.370.010029
ORF1ab/nsp15A1-B263F263LTttCtt3132AY.1030.000192
ORF1ab/nsp15A1-B263F263LTttCtt2431B.1.20.000211
ORF1ab/nsp15A1-B263F263LTttCtt1517B.10.000137
ORF1ab/nsp15A1-B263F263LTttCtt113B.1.2210.000071
ORF1ab/nsp15A1-B263F263LTttCtt1212AY.30.000119
ORF1ab/nsp15A1-B263F263LTttCtt1212B.1.1.2690.016238
ORF1ab/nsp15A1-B263F263LTttCtt1012B.1.1770.000132
ORF1ab/nsp15A1-B263F263LTttCtt311AY.430.000013
ORF1ab/nsp15A1-B263F263LTttCtt1011B.1.3510.000297
ORF1ab/nsp15A1-B263F263LTttCtt510B.1.10.000091
ORF1ab/nsp15A1-B263F263LTttCtt410B.1.617.20.000015
ORF1ab/nsp15A1-B263F263LTttCtt1010C.370.001161
ORF1ab/nsp15A1-B263F263LTttCtt67P.10.000095
ORF1ab/nsp15A1-B263F263LTttCtt77Q.40.003183
ORF1ab/nsp15A1-B263F263LTttCtt46AY.440.000024
ORF1ab/nsp15A1-B263F263LTttCtt35B.1.4290.000071
ORF1ab/nsp15A1-B263F263LTttCtt24AY.250.000012
ORF1ab/nsp15A1-B263F263LTttCtt44AY.270.000259
ORF1ab/nsp15A1-B263F263LTttCtt34B.1.1.250.001706
ORF1ab/nsp15A1-B263F263LTttCtt44B.1.1.5190.000159
ORF1ab/nsp15A1-B263F263LTttCtt33AY.420.000121
ORF1ab/nsp15A1-B263F263LTttCtt33B.1.1.3030.008287
ORF1ab/nsp15A1-B263F263LTttCtt13B.1.1600.000031
ORF1ab/nsp15A1-B263F263LTttCtt33B.1.6230.001609
ORF1ab/nsp15A1-B263F263LTttCtt33B.1.6280.001057
ORF1ab/nsp15A1-B263F263LTttCtt22AY.390.000049
ORF1ab/nsp15A1-B263F263LTttCtt22AY.60.000082
ORF1ab/nsp15A1-B263F263LTttCtt22P.1.140.000096
ORF1ab/nsp15A1-B263F263LTttCtt11AY.290.000016
ORF1ab/nsp15A1-B263F263LTttCtt11AY.46.10.001027
ORF1ab/nsp15A1-B263F263LTttCtt11AY.750.000056
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.1.10.000327
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.177.310.011494
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.258.170.000104
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.360.000146
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.3670.000792
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.4270.00005
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.4660.023256
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.6190.000871
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.6210.000089
ORF1ab/nsp15A1-B263F263LTttCtt11B.1.6370.000073
ORF1ab/nsp15A1-B263F263LTttCtt11C.160.00106
ORF1ab/nsp15A1-B263F263LTttCtt11R.10.00009