CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 259 & Codon = aaA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B259K259KK6711KsynaaGaaA11751175120395-20397

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B259K259KaaGaaA11751175All0.000225
ORF1ab/nsp15A1-B259K259KaaGaaA133133B.1.1.70.000119
ORF1ab/nsp15A1-B259K259KaaGaaA125125B.1.5820.061335
ORF1ab/nsp15A1-B259K259KaaGaaA8484B.1.617.20.000316
ORF1ab/nsp15A1-B259K259KaaGaaA6666B.1.1770.000869
ORF1ab/nsp15A1-B259K259KaaGaaA6464B.1.4290.001506
ORF1ab/nsp15A1-B259K259KaaGaaA5656AY.40.000087
ORF1ab/nsp15A1-B259K259KaaGaaA4646AY.250.000277
ORF1ab/nsp15A1-B259K259KaaGaaA4444B.1.20.000387
ORF1ab/nsp15A1-B259K259KaaGaaA4141B.1.3060.234286
ORF1ab/nsp15A1-B259K259KaaGaaA3535AY.390.000865
ORF1ab/nsp15A1-B259K259KaaGaaA3333P.10.00052
ORF1ab/nsp15A1-B259K259KaaGaaA2626B.1.10.000472
ORF1ab/nsp15A1-B259K259KaaGaaA2424B.1.5260.000564
ORF1ab/nsp15A1-B259K259KaaGaaA2323AY.1030.000143
ORF1ab/nsp15A1-B259K259KaaGaaA2323AY.430.000102
ORF1ab/nsp15A1-B259K259KaaGaaA2020B.10.000183
ORF1ab/nsp15A1-B259K259KaaGaaA2020B.1.4270.00101
ORF1ab/nsp15A1-B259K259KaaGaaA1919B.1.1.4020.211111
ORF1ab/nsp15A1-B259K259KaaGaaA1616AY.3.10.001364
ORF1ab/nsp15A1-B259K259KaaGaaA1313AY.29.10.002867
ORF1ab/nsp15A1-B259K259KaaGaaA1313AY.30.000129
ORF1ab/nsp15A1-B259K259KaaGaaA1212AY.290.000189
ORF1ab/nsp15A1-B259K259KaaGaaA1111B.1.2430.000765
ORF1ab/nsp15A1-B259K259KaaGaaA1111B.1.351.20.003328
ORF1ab/nsp15A1-B259K259KaaGaaA99AY.1020.000239
ORF1ab/nsp15A1-B259K259KaaGaaA99AY.200.00035
ORF1ab/nsp15A1-B259K259KaaGaaA99AY.4.20.000195
ORF1ab/nsp15A1-B259K259KaaGaaA99AY.440.000055
ORF1ab/nsp15A1-B259K259KaaGaaA88P.1.140.000382
ORF1ab/nsp15A1-B259K259KaaGaaA66B.1.4970.001889
ORF1ab/nsp15A1-B259K259KaaGaaA55AY.1180.000313
ORF1ab/nsp15A1-B259K259KaaGaaA55B.1.1.2200.009294
ORF1ab/nsp15A1-B259K259KaaGaaA55B.1.1600.000156
ORF1ab/nsp15A1-B259K259KaaGaaA55B.1.3510.000149
ORF1ab/nsp15A1-B259K259KaaGaaA55B.1.5650.004052
ORF1ab/nsp15A1-B259K259KaaGaaA44AY.1000.000184
ORF1ab/nsp15A1-B259K259KaaGaaA44AY.120.001264
ORF1ab/nsp15A1-B259K259KaaGaaA44AY.39.10.000158
ORF1ab/nsp15A1-B259K259KaaGaaA44B.1.1.2220.000816
ORF1ab/nsp15A1-B259K259KaaGaaA44B.1.4480.010499
ORF1ab/nsp15A1-B259K259KaaGaaA44B.1.5960.000349
ORF1ab/nsp15A1-B259K259KaaGaaA44B.1.6210.000354
ORF1ab/nsp15A1-B259K259KaaGaaA44P.1.150.000929
ORF1ab/nsp15A1-B259K259KaaGaaA33AY.1200.000112
ORF1ab/nsp15A1-B259K259KaaGaaA33AY.460.000312
ORF1ab/nsp15A1-B259K259KaaGaaA33AY.9.20.00011
ORF1ab/nsp15A1-B259K259KaaGaaA33B.1.1.280.000934
ORF1ab/nsp15A1-B259K259KaaGaaA33B.1.1.4340.001046
ORF1ab/nsp15A1-B259K259KaaGaaA33B.1.4700.004213
ORF1ab/nsp15A1-B259K259KaaGaaA33B.1.5510.003871
ORF1ab/nsp15A1-B259K259KaaGaaA33B.1.6120.007958
ORF1ab/nsp15A1-B259K259KaaGaaA33P.20.00056
ORF1ab/nsp15A1-B259K259KaaGaaA220.111111
ORF1ab/nsp15A1-B259K259KaaGaaA22AY.1060.00067
ORF1ab/nsp15A1-B259K259KaaGaaA22AY.1130.000285
ORF1ab/nsp15A1-B259K259KaaGaaA22AY.120.2.10.000997
ORF1ab/nsp15A1-B259K259KaaGaaA22AY.5.30.000675
ORF1ab/nsp15A1-B259K259KaaGaaA22AY.60.000082
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.1.2140.000111
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.1.3060.000877
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.1.3540.008772
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.1.5190.000079
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.3690.00057
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.4280.002041
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.5610.000794
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.5680.002222
ORF1ab/nsp15A1-B259K259KaaGaaA22B.1.6370.000146
ORF1ab/nsp15A1-B259K259KaaGaaA22P.1.70.000639
ORF1ab/nsp15A1-B259K259KaaGaaA22R.10.00018
ORF1ab/nsp15A1-B259K259KaaGaaA11AE.30.032258
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.1170.000085
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.1190.000035
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.120.10.000321
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.160.00038
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.230.00007
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.260.000028
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.370.000316
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.380.000499
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.4.10.000737
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.46.50.000198
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.470.000031
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.50.000021
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.5.40.000277
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.550.000917
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.710.000475
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.75.10.00018
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.9.10.000084
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.940.000443
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.98.10.000048
ORF1ab/nsp15A1-B259K259KaaGaaA11AY.990.001049
ORF1ab/nsp15A1-B259K259KaaGaaA11AZ.30.00152
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.2190.005
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.3040.002809
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.3090.005848
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.3440.010753
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.370.000193
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.470.005348
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.630.000386
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1.700.000341
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.1260.001276
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.177.310.011494
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.177.40.000211
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.177.410.0025
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.177.810.000189
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.2210.000071
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.360.000146
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.3610.001289
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.3710.001122
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.4160.001269
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.4250.002994
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.5760.000907
ORF1ab/nsp15A1-B259K259KaaGaaA11B.1.5950.000261
ORF1ab/nsp15A1-B259K259KaaGaaA11C.350.000774
ORF1ab/nsp15A1-B259K259KaaGaaA11C.370.000116
ORF1ab/nsp15A1-B259K259KaaGaaA11N.90.005952
ORF1ab/nsp15A1-B259K259KaaGaaA11P.1.170.000162
ORF1ab/nsp15A1-B259K259KaaGaaA11P.1.20.001156
ORF1ab/nsp15A1-B259K259KaaGaaA11Q.80.000165