CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 250 & Codon = cCa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B250L250PL6702PnonsyncTacCa7474120368-20370

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B250L250PcTacCa7474All0.000014
ORF1ab/nsp15A1-B250L250PcTacCa2323AY.280.043478
ORF1ab/nsp15A1-B250L250PcTacCa99B.1.1770.000119
ORF1ab/nsp15A1-B250L250PcTacCa88AY.1030.00005
ORF1ab/nsp15A1-B250L250PcTacCa88AY.50.000165
ORF1ab/nsp15A1-B250L250PcTacCa44B.10.000037
ORF1ab/nsp15A1-B250L250PcTacCa33AY.30.00003
ORF1ab/nsp15A1-B250L250PcTacCa33AY.740.000347
ORF1ab/nsp15A1-B250L250PcTacCa33B.1.617.20.000011
ORF1ab/nsp15A1-B250L250PcTacCa22AY.40.000003
ORF1ab/nsp15A1-B250L250PcTacCa22AY.440.000012
ORF1ab/nsp15A1-B250L250PcTacCa22B.1.20.000018
ORF1ab/nsp15A1-B250L250PcTacCa11A.20.000662
ORF1ab/nsp15A1-B250L250PcTacCa11AY.1100.000113
ORF1ab/nsp15A1-B250L250PcTacCa11AY.1190.000035
ORF1ab/nsp15A1-B250L250PcTacCa11AY.250.000006
ORF1ab/nsp15A1-B250L250PcTacCa11AY.430.000004
ORF1ab/nsp15A1-B250L250PcTacCa11AY.500.000799
ORF1ab/nsp15A1-B250L250PcTacCa11B.1.1600.000031