CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 216

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B216L216LL6668LsynttAttG96207960690.99856620266-20268
ORF1ab/nsp15A1-B216L216LL6668LsynTtaCta962071380.0014344120266-20268
ORF1ab/nsp15A1-B216L216delL6668deldelTTA---6868120266-20268
ORF1ab/nsp15A1-B216L216SL6668SnonsyntTatCa68670.98529420266-20268
ORF1ab/nsp15A1-B216L216SL6668SnonsyntTAtCG6810.014705920266-20268
ORF1ab/nsp15A1-B216L216VL6668VnonsynTtaGta20170.8520266-20268
ORF1ab/nsp15A1-B216L216VL6668VnonsynTtAGtG2030.1520266-20268
ORF1ab/nsp15A1-B216L216FL6668FnonsynttAttT16140.87520266-20268
ORF1ab/nsp15A1-B216L216FL6668FnonsynttAttC1620.12520266-20268
ORF1ab/nsp15A1-B216L216IL6668InonsynTtaAta980.88888920266-20268
ORF1ab/nsp15A1-B216L216IL6668InonsynTtAAtT910.11111120266-20268
ORF1ab/nsp15A1-B216L216ML6668MnonsynTtAAtG22120266-20268
ORF1ab/nsp15A1-B216L216QL6668QnonsynTTaCAa11120266-20268
ORF1ab/nsp15A1-B216L216XL6668XnonsyntTAtAG11120266-20268
ORF1ab/nsp15A1-B216L216AL6668AnonsynTTAGCG11120266-20268
ORF1ab/nsp15A1-B216L216KL6668KnonsynTTaAAa11120266-20268
ORF1ab/nsp15A1-B216L216del2L6668del2delTTa--a11120266-20268

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B216L216LttAttG9606996207All0.018374
ORF1ab/nsp15A1-B216L216LTtaCta13896207All0.000026
ORF1ab/nsp15A1-B216L216LttAttG1520715208B.10.139289
ORF1ab/nsp15A1-B216L216LTtaCta115208B.10.000009
ORF1ab/nsp15A1-B216L216LttAttG1452914529B.1.2580.96686
ORF1ab/nsp15A1-B216L216LttAttG1341513415B.1.2430.933477
ORF1ab/nsp15A1-B216L216LttAttG95179517B.1.258.170.989499
ORF1ab/nsp15A1-B216L216LttAttG69816981B.1.2340.921098
ORF1ab/nsp15A1-B216L216LttAttG40534053B.1.2400.87368
ORF1ab/nsp15A1-B216L216LttAttG24842484B.1.258.110.984542
ORF1ab/nsp15A1-B216L216LttAttG23772377B.1.5610.943628
ORF1ab/nsp15A1-B216L216LttAttG19991999B.1.4000.857572
ORF1ab/nsp15A1-B216L216LttAttG17081708B.1.2320.917786
ORF1ab/nsp15A1-B216L216LttAttG14481448B.1.6090.694151
ORF1ab/nsp15A1-B216L216LttAttG13081308B.1.3960.923077
ORF1ab/nsp15A1-B216L216LttAttG12141214B.1.4090.948438
ORF1ab/nsp15A1-B216L216LttAttG11301130B.1.2410.917208
ORF1ab/nsp15A1-B216L216LttAttG895895B.1.258.140.877451
ORF1ab/nsp15A1-B216L216LttAttG709709B.1.5510.914839
ORF1ab/nsp15A1-B216L216LttAttG707707B.1.2390.863248
ORF1ab/nsp15A1-B216L216LttAttG690690B.1.4160.875635
ORF1ab/nsp15A1-B216L216LttAttG661661AY.430.002929
ORF1ab/nsp15A1-B216L216LttAttG642642B.1.4040.835938
ORF1ab/nsp15A1-B216L216LttAttG606606B.1.258.160.991817
ORF1ab/nsp15A1-B216L216LttAttG606606B.1.416.10.946875
ORF1ab/nsp15A1-B216L216LttAttG591591B.1.258.30.98995
ORF1ab/nsp15A1-B216L216LttAttG518518B.1.258.70.99044
ORF1ab/nsp15A1-B216L216LttAttG479479B.1.2360.983573
ORF1ab/nsp15A1-B216L216LttAttG420420B.1.10.007619
ORF1ab/nsp15A1-B216L216LttAttG403403B.1.3990.779497
ORF1ab/nsp15A1-B216L216LttAttG389389B.1.2350.979849
ORF1ab/nsp15A1-B216L216LttAttG375375B.1.258.221
ORF1ab/nsp15A1-B216L216LttAttG352353B.1.20.003099
ORF1ab/nsp15A1-B216L216LTtaCta1353B.1.20.000009
ORF1ab/nsp15A1-B216L216LttAttG320320B.1.2230.888889
ORF1ab/nsp15A1-B216L216LttAttG304304B.1.3980.904762
ORF1ab/nsp15A1-B216L216LttAttG286286B.1.258.40.986207
ORF1ab/nsp15A1-B216L216LttAttG279279B.1.6100.989362
ORF1ab/nsp15A1-B216L216LttAttG276276B.1.4030.901961
ORF1ab/nsp15A1-B216L216LttAttG264264B.1.4080.97417
ORF1ab/nsp15A1-B216L216LttAttG241245P.10.003797
ORF1ab/nsp15A1-B216L216LTtaCta4245P.10.000063
ORF1ab/nsp15A1-B216L216LttAttG221221B.1.258.20.995495
ORF1ab/nsp15A1-B216L216LttAttG218218B.1.1890.935622
ORF1ab/nsp15A1-B216L216LttAttG212212B.1.1570.632836
ORF1ab/nsp15A1-B216L216LttAttG199199B.1.258.90.995
ORF1ab/nsp15A1-B216L216LttAttG197197B.1.5580.899543
ORF1ab/nsp15A1-B216L216LttAttG192192B.1.2370.955224
ORF1ab/nsp15A1-B216L216LttAttG122180B.1.1.70.000109
ORF1ab/nsp15A1-B216L216LTtaCta58180B.1.1.70.000052
ORF1ab/nsp15A1-B216L216LttAttG169169B.1.3970.820388
ORF1ab/nsp15A1-B216L216LttAttG166166B.1.6000.97076
ORF1ab/nsp15A1-B216L216LttAttG165165B.1.4061
ORF1ab/nsp15A1-B216L216LttAttG147147B.1.5960.012809
ORF1ab/nsp15A1-B216L216LttAttG146146B.1.6020.954248
ORF1ab/nsp15A1-B216L216LttAttG140140B.1.258.190.992908
ORF1ab/nsp15A1-B216L216LttAttG138138B.1.1821
ORF1ab/nsp15A1-B216L216LttAttG132132B.1.4210.985075
ORF1ab/nsp15A1-B216L216LttAttG131131B.1.5560.984962
ORF1ab/nsp15A1-B216L216LttAttG128128B.1.415.10.969697
ORF1ab/nsp15A1-B216L216LttAttG127127B.1.258.210.984496
ORF1ab/nsp15A1-B216L216LttAttG116116B.1.258.120.913386
ORF1ab/nsp15A1-B216L216LttAttG115115AY.420.004626
ORF1ab/nsp15A1-B216L216LttAttG113113B.1.258.50.991228
ORF1ab/nsp15A1-B216L216LttAttG113113B.1.4010.92623
ORF1ab/nsp15A1-B216L216LttAttG110110B.1.3810.859375
ORF1ab/nsp15A1-B216L216LttAttG108108B.1.1921
ORF1ab/nsp15A1-B216L216LttAttG105105AY.4.50.011287
ORF1ab/nsp15A1-B216L216LttAttG103103AY.7.20.057606
ORF1ab/nsp15A1-B216L216LttAttG9999B.1.4020.970588
ORF1ab/nsp15A1-B216L216LttAttG9898B.1.2290.951456
ORF1ab/nsp15A1-B216L216LttAttG9898B.1.5540.431718
ORF1ab/nsp15A1-B216L216LttAttG9696B.1.4201
ORF1ab/nsp15A1-B216L216LttAttG9494B.1.1900.94
ORF1ab/nsp15A1-B216L216LttAttG9393B.1.258.241
ORF1ab/nsp15A1-B216L216LttAttG8888B.1.258.101
ORF1ab/nsp15A1-B216L216LttAttG8383AY.98.10.00402
ORF1ab/nsp15A1-B216L216LttAttG7575AY.46.10.077002
ORF1ab/nsp15A1-B216L216LttAttG7373B.1.4050.901235
ORF1ab/nsp15A1-B216L216LttAttG7272B.1.5500.986301
ORF1ab/nsp15A1-B216L216LttAttG6869AY.610.007125
ORF1ab/nsp15A1-B216L216LTtaCta169AY.610.000105
ORF1ab/nsp15A1-B216L216delTTA---6868All0.000013
ORF1ab/nsp15A1-B216L216StTatCa6768All0.000013
ORF1ab/nsp15A1-B216L216StTAtCG168All0
ORF1ab/nsp15A1-B216L216LttAttG6868B.1.243.20.985507
ORF1ab/nsp15A1-B216L216LttAttG6767B.1.2381
ORF1ab/nsp15A1-B216L216LttAttG6666B.1.2330.929577
ORF1ab/nsp15A1-B216L216LttAttG6565B.1.2251
ORF1ab/nsp15A1-B216L216LttAttG6363B.1.4181
ORF1ab/nsp15A1-B216L216LttAttG6062B.1.617.20.000226
ORF1ab/nsp15A1-B216L216LTtaCta262B.1.617.20.000008
ORF1ab/nsp15A1-B216L216LttAttG6161AY.460.006349
ORF1ab/nsp15A1-B216L216LttAttG6161B.1.1.3341
ORF1ab/nsp15A1-B216L216LttAttG6161B.1.258.200.968254
ORF1ab/nsp15A1-B216L216LttAttG6161B.1.4150.871429
ORF1ab/nsp15A1-B216L216LttAttG5859AY.390.001433
ORF1ab/nsp15A1-B216L216LTtaCta159AY.390.000025
ORF1ab/nsp15A1-B216L216LttAttG5959B.1.1990.243802
ORF1ab/nsp15A1-B216L216LttAttG5959B.1.400.10.893939
ORF1ab/nsp15A1-B216L216LttAttG5656B.1.2560.965517
ORF1ab/nsp15A1-B216L216LttAttG5454B.1.6350.947368
ORF1ab/nsp15A1-B216L216LttAttG5353AY.5.40.014665
ORF1ab/nsp15A1-B216L216LttAttG5252B.1.1690.776119
ORF1ab/nsp15A1-B216L216LttAttG5151B.1.2420.962264
ORF1ab/nsp15A1-B216L216LttAttG5050AY.340.004848
ORF1ab/nsp15A1-B216L216LttAttG5050B.1.258.150.943396
ORF1ab/nsp15A1-B216L216LttAttG4949B.1.258.60.960784
ORF1ab/nsp15A1-B216L216LttAttG4445B.1.1770.000579
ORF1ab/nsp15A1-B216L216LTtaCta145B.1.1770.000013
ORF1ab/nsp15A1-B216L216LttAttG4444B.1.1810.862745
ORF1ab/nsp15A1-B216L216LttAttG4141B.1.1.4660.356522
ORF1ab/nsp15A1-B216L216LttAttG4040B.1.2241
ORF1ab/nsp15A1-B216L216LttAttG4040B.1.240.11
ORF1ab/nsp15A1-B216L216LttAttG3737AY.710.017577
ORF1ab/nsp15A1-B216L216LttAttG3737B.1.243.10.822222
ORF1ab/nsp15A1-B216L216LttAttG3535B.1.258.230.833333
ORF1ab/nsp15A1-B216L216LttAttG3333B.1.240.21
ORF1ab/nsp15A1-B216L216LttAttG3232B.1.1600.000998
ORF1ab/nsp15A1-B216L216LttAttG1831AY.40.000028
ORF1ab/nsp15A1-B216L216LTtaCta1331AY.40.00002
ORF1ab/nsp15A1-B216L216LttAttG3131B.1.1180.208054
ORF1ab/nsp15A1-B216L216LttAttG3131B.1.2210.002202
ORF1ab/nsp15A1-B216L216LttAttG3131B.1.5420.96875
ORF1ab/nsp15A1-B216L216LttAttG3030B.1.2310.967742
ORF1ab/nsp15A1-B216L216LttAttG3030B.1.4170.857143
ORF1ab/nsp15A1-B216L216LTtaCta2930B.1.6210.002567
ORF1ab/nsp15A1-B216L216LttAttG130B.1.6210.000089
ORF1ab/nsp15A1-B216L216LttAttG2828AY.1160.00803
ORF1ab/nsp15A1-B216L216LttAttG2727AY.440.000164
ORF1ab/nsp15A1-B216L216LttAttG2626AY.46.60.001877
ORF1ab/nsp15A1-B216L216LttAttG2425AY.9.20.000882
ORF1ab/nsp15A1-B216L216LTtaCta125AY.9.20.000037
ORF1ab/nsp15A1-B216L216LttAttG2525B0.003195
ORF1ab/nsp15A1-B216L216LttAttG2525B.1.4070.892857
ORF1ab/nsp15A1-B216L216LttAttG2424G.11
ORF1ab/nsp15A1-B216L216LttAttG2323AY.75.10.004147
ORF1ab/nsp15A1-B216L216LttAttG1921AY.250.000114
ORF1ab/nsp15A1-B216L216LTtaCta221AY.250.000012
ORF1ab/nsp15A1-B216L216VTtaGta1720All0.000003
ORF1ab/nsp15A1-B216L216VTtAGtG320All0.000001
ORF1ab/nsp15A1-B216L216LttAttG1919AY.330.001269
ORF1ab/nsp15A1-B216L216LttAttG1919B.1.1800.95
ORF1ab/nsp15A1-B216L216LttAttG1818P.1.10.005718
ORF1ab/nsp15A1-B216L216LttAttG1717B.1.5950.004436
ORF1ab/nsp15A1-B216L216FttAttT1416All0.000003
ORF1ab/nsp15A1-B216L216FttAttC216All0
ORF1ab/nsp15A1-B216L216StTatCa1515AY.250.00009
ORF1ab/nsp15A1-B216L216LttAttG1515B.1.2220.025381
ORF1ab/nsp15A1-B216L216LttAttG1515B.1.5800.060976
ORF1ab/nsp15A1-B216L216LttAttG1414A0.005418
ORF1ab/nsp15A1-B216L216StTatCa1414AY.30.000139
ORF1ab/nsp15A1-B216L216LttAttG1414B.1.3490.010007
ORF1ab/nsp15A1-B216L216LttAttG1414C.36.30.007941
ORF1ab/nsp15A1-B216L216StTatCa1212AY.1060.004019
ORF1ab/nsp15A1-B216L216LttAttG1212AY.260.00034
ORF1ab/nsp15A1-B216L216LttAttG1212B.1.3510.000357
ORF1ab/nsp15A1-B216L216LttAttG1212B.1.3670.009509
ORF1ab/nsp15A1-B216L216LttAttG1212B.1.3690.003423
ORF1ab/nsp15A1-B216L216LttAttG1111AY.620.004793
ORF1ab/nsp15A1-B216L216LttAttG1010AY.9.10.000837
ORF1ab/nsp15A1-B216L216delTTA---1010B.1.1.70.000009
ORF1ab/nsp15A1-B216L216LttAttG1010B.1.258.181
ORF1ab/nsp15A1-B216L216LttAttG1010B.1.4290.000235
ORF1ab/nsp15A1-B216L216LttAttG1010B.1.5820.004907
ORF1ab/nsp15A1-B216L216LttAttG1010B.1.6180.040323
ORF1ab/nsp15A1-B216L216ITtaAta89All0.000002
ORF1ab/nsp15A1-B216L216ITtAAtT19All0
ORF1ab/nsp15A1-B216L216LttAttG99AY.1060.003014
ORF1ab/nsp15A1-B216L216LttAttG99AY.680.002464
ORF1ab/nsp15A1-B216L216LttAttG99B.1.160.160.008364
ORF1ab/nsp15A1-B216L216LttAttG99B.1.1670.070312
ORF1ab/nsp15A1-B216L216LttAttG99B.1.3110.002471
ORF1ab/nsp15A1-B216L216LttAttG99B.1.5760.00816
ORF1ab/nsp15A1-B216L216LttAttG88AY.1030.00005
ORF1ab/nsp15A1-B216L216LttAttG88B.1.4270.000404
ORF1ab/nsp15A1-B216L216LttAttG88B.1.4500.090909
ORF1ab/nsp15A1-B216L216LttAttG88B.4.10.150943
ORF1ab/nsp15A1-B216L216LttAttG77AY.1020.000186
ORF1ab/nsp15A1-B216L216LttAttG77AY.700.00146
ORF1ab/nsp15A1-B216L216LttAttG77B.1.2470.104478
ORF1ab/nsp15A1-B216L216LttAttG77B.1.5450.101449
ORF1ab/nsp15A1-B216L216FttAttT77B.1.5610.002779
ORF1ab/nsp15A1-B216L216delTTA---66AY.250.000036
ORF1ab/nsp15A1-B216L216LttAttG66AY.360.000889
ORF1ab/nsp15A1-B216L216delTTA---66AY.430.000027
ORF1ab/nsp15A1-B216L216LttAttG66AY.650.003198
ORF1ab/nsp15A1-B216L216LttAttG66B.1.1.250.003411
ORF1ab/nsp15A1-B216L216LttAttG56B.1.1.5190.000199
ORF1ab/nsp15A1-B216L216LTtaCta16B.1.1.5190.00004
ORF1ab/nsp15A1-B216L216LttAttG66B.1.1.5260.021277
ORF1ab/nsp15A1-B216L216LttAttG66B.1.177.730.003398
ORF1ab/nsp15A1-B216L216LttAttG66B.1.2060.004894
ORF1ab/nsp15A1-B216L216LttAttG66B.1.5100.157895
ORF1ab/nsp15A1-B216L216LttAttG46B.1.5170.001708
ORF1ab/nsp15A1-B216L216LTtaCta26B.1.5170.000854
ORF1ab/nsp15A1-B216L216LttAttG66C.10.014354
ORF1ab/nsp15A1-B216L216LTtaCta55AY.290.000079
ORF1ab/nsp15A1-B216L216LttAttG55AY.410.00147
ORF1ab/nsp15A1-B216L216LttAttG55AY.530.001438
ORF1ab/nsp15A1-B216L216LttAttG55AY.580.004537
ORF1ab/nsp15A1-B216L216LttAttG55AY.750.00028
ORF1ab/nsp15A1-B216L216LttAttG55AY.980.000395
ORF1ab/nsp15A1-B216L216LttAttG55B.1.1.1610.017668
ORF1ab/nsp15A1-B216L216LttAttG55B.1.1.2670.050505
ORF1ab/nsp15A1-B216L216LttAttG55B.1.1.2940.006329
ORF1ab/nsp15A1-B216L216LttAttG55B.1.160.320.021459
ORF1ab/nsp15A1-B216L216LttAttG55B.1.2810.108696
ORF1ab/nsp15A1-B216L216LttAttG55B.1.3750.004098
ORF1ab/nsp15A1-B216L216LttAttG55B.1.4110.018519
ORF1ab/nsp15A1-B216L216LttAttG55B.1.5640.002129
ORF1ab/nsp15A1-B216L216LttAttG55B.1.6120.013263
ORF1ab/nsp15A1-B216L216StTatCa55B.1.617.20.000019
ORF1ab/nsp15A1-B216L216LttAttG45P.1.140.000191
ORF1ab/nsp15A1-B216L216LTtaCta15P.1.140.000048
ORF1ab/nsp15A1-B216L216delTTA---440.222222
ORF1ab/nsp15A1-B216L216LttAttG44A.50.007692
ORF1ab/nsp15A1-B216L216delTTA---44AY.40.000006
ORF1ab/nsp15A1-B216L216StTatCa44AY.430.000018
ORF1ab/nsp15A1-B216L216LttAttG44AY.450.000487
ORF1ab/nsp15A1-B216L216delTTA---44AY.590.002119
ORF1ab/nsp15A1-B216L216LttAttG44AY.840.00175
ORF1ab/nsp15A1-B216L216LttAttG44AY.920.001149
ORF1ab/nsp15A1-B216L216VTtaGta24B.1.1.70.000002
ORF1ab/nsp15A1-B216L216VTtAGtG24B.1.1.70.000002
ORF1ab/nsp15A1-B216L216LttAttG44B.1.1110.0047
ORF1ab/nsp15A1-B216L216LttAttG44B.1.177.430.005908
ORF1ab/nsp15A1-B216L216LttAttG44B.1.177.70.000659
ORF1ab/nsp15A1-B216L216delTTA---44B.1.20.000035
ORF1ab/nsp15A1-B216L216LttAttG44B.1.2650.005083
ORF1ab/nsp15A1-B216L216LttAttG44B.1.3230.083333
ORF1ab/nsp15A1-B216L216LttAttG44B.1.5260.000094
ORF1ab/nsp15A1-B216L216LttAttG44B.1.760.045455
ORF1ab/nsp15A1-B216L216LttAttG34B.1.780.025641
ORF1ab/nsp15A1-B216L216LTtaCta14B.1.780.008547
ORF1ab/nsp15A1-B216L216LttAttG33AY.1130.000427
ORF1ab/nsp15A1-B216L216LttAttG33AY.380.001498
ORF1ab/nsp15A1-B216L216VTtaGta33AY.390.000074
ORF1ab/nsp15A1-B216L216LttAttG33AY.730.001996
ORF1ab/nsp15A1-B216L216LttAttG33AY.90.000203
ORF1ab/nsp15A1-B216L216FttAttC23B.10.000018
ORF1ab/nsp15A1-B216L216FttAttT13B.10.000009
ORF1ab/nsp15A1-B216L216LttAttG33B.1.1.3720.002066
ORF1ab/nsp15A1-B216L216LttAttG33B.1.1.3770.004144
ORF1ab/nsp15A1-B216L216LttAttG23B.1.1.4090.005666
ORF1ab/nsp15A1-B216L216LTtaCta13B.1.1.4090.002833
ORF1ab/nsp15A1-B216L216LttAttG33B.1.1.700.001023
ORF1ab/nsp15A1-B216L216LttAttG33B.1.1040.01107
ORF1ab/nsp15A1-B216L216StTatCa33B.1.20.000026
ORF1ab/nsp15A1-B216L216delTTA---33B.1.2580.0002
ORF1ab/nsp15A1-B216L216LttAttG33B.1.2840.039474
ORF1ab/nsp15A1-B216L216LttAttG33B.1.3260.022727
ORF1ab/nsp15A1-B216L216LttAttG33B.1.3320.01049
ORF1ab/nsp15A1-B216L216LttAttG33B.1.360.000438
ORF1ab/nsp15A1-B216L216LttAttG33B.1.36.360.001806
ORF1ab/nsp15A1-B216L216LttAttG33B.1.4320.033708
ORF1ab/nsp15A1-B216L216LTtaCta23B.1.466.20.000782
ORF1ab/nsp15A1-B216L216LttAttG13B.1.466.20.000391
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5000.157895
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5250.000339
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5270.011111
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5600.013889
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5650.002431
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5770.002062
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5780.053571
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5810.028302
ORF1ab/nsp15A1-B216L216LttAttG33B.1.5900.013636
ORF1ab/nsp15A1-B216L216ITtaAta33B.1.617.20.000011
ORF1ab/nsp15A1-B216L216LttAttG33P.1.150.000697
ORF1ab/nsp15A1-B216L216delTTA---33P.1.150.000697
ORF1ab/nsp15A1-B216L216LttAttG22A.2.40.006734
ORF1ab/nsp15A1-B216L216MTtAAtG22All0
ORF1ab/nsp15A1-B216L216LTtaCta12AY.1200.000037
ORF1ab/nsp15A1-B216L216LttAttG12AY.1200.000037
ORF1ab/nsp15A1-B216L216LttAttG12AY.200.000039
ORF1ab/nsp15A1-B216L216LTtaCta12AY.200.000039
ORF1ab/nsp15A1-B216L216LTtaCta22AY.30.00002
ORF1ab/nsp15A1-B216L216StTatCa22AY.390.000049
ORF1ab/nsp15A1-B216L216LTtaCta12AY.39.10.00004
ORF1ab/nsp15A1-B216L216LttAttG12AY.39.10.00004
ORF1ab/nsp15A1-B216L216StTatCa22AY.440.000012
ORF1ab/nsp15A1-B216L216StTatCa22AY.460.000208
ORF1ab/nsp15A1-B216L216LttAttG22AY.50.000041
ORF1ab/nsp15A1-B216L216LttAttG22AY.670.000929
ORF1ab/nsp15A1-B216L216LttAttG22AY.950.001522
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.1530.002191
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.1710.007353
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.2190.01
ORF1ab/nsp15A1-B216L216LttAttG12B.1.1.2220.000204
ORF1ab/nsp15A1-B216L216LTtaCta12B.1.1.2220.000204
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.270.011299
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.3700.025316
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.390.001019
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1.500.001358
ORF1ab/nsp15A1-B216L216StTatCa22B.1.1.70.000002
ORF1ab/nsp15A1-B216L216ITtaAta12B.1.1.70.000001
ORF1ab/nsp15A1-B216L216ITtAAtT12B.1.1.70.000001
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1280.001271
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1390.001466
ORF1ab/nsp15A1-B216L216LttAttG22B.1.1490.006849
ORF1ab/nsp15A1-B216L216LttAttG22B.1.177.60.001953
ORF1ab/nsp15A1-B216L216LttAttG22B.1.177.810.000379
ORF1ab/nsp15A1-B216L216LttAttG22B.1.2140.007326
ORF1ab/nsp15A1-B216L216LttAttG22B.1.2760.033898
ORF1ab/nsp15A1-B216L216LttAttG22B.1.2790.001027
ORF1ab/nsp15A1-B216L216LttAttG22B.1.2980.004228
ORF1ab/nsp15A1-B216L216LttAttG22B.1.3060.011429
ORF1ab/nsp15A1-B216L216LttAttG22B.1.3190.006098
ORF1ab/nsp15A1-B216L216LttAttG22B.1.3240.00321
ORF1ab/nsp15A1-B216L216LttAttG22B.1.36.220.002415
ORF1ab/nsp15A1-B216L216LTtaCta22B.1.36.290.001035
ORF1ab/nsp15A1-B216L216LttAttG22B.1.36.390.004435
ORF1ab/nsp15A1-B216L216LttAttG22B.1.3950.014085
ORF1ab/nsp15A1-B216L216LttAttG22B.1.4530.006472
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5060.047619
ORF1ab/nsp15A1-B216L216delTTA---22B.1.5170.000854
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5210.00995
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5350.057143
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5370.04
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5460.007407
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5550.044444
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5660.038462
ORF1ab/nsp15A1-B216L216LttAttG22B.1.5990.007299
ORF1ab/nsp15A1-B216L216LttAttG22B.1.6060.012048
ORF1ab/nsp15A1-B216L216LttAttG22B.1.617.10.000258
ORF1ab/nsp15A1-B216L216delTTA---22B.1.617.20.000008
ORF1ab/nsp15A1-B216L216LTtaCta12B.1.6370.000073
ORF1ab/nsp15A1-B216L216LttAttG12B.1.6370.000073
ORF1ab/nsp15A1-B216L216LttAttG22C.37.10.005236
ORF1ab/nsp15A1-B216L216VTtaGta22P.10.000032
ORF1ab/nsp15A1-B216L216delTTA---22P.1.10.000635
ORF1ab/nsp15A1-B216L216LttAttG22P.1.120.000968
ORF1ab/nsp15A1-B216L216LttAttG11A.20.000662
ORF1ab/nsp15A1-B216L216VTtaGta11A.2.20.001689
ORF1ab/nsp15A1-B216L216delTTA---11A.2.40.003367
ORF1ab/nsp15A1-B216L216LttAttG11A.2.50.000499
ORF1ab/nsp15A1-B216L216LttAttG11AD.10.004115
ORF1ab/nsp15A1-B216L216XtTAtAG11All0
ORF1ab/nsp15A1-B216L216ATTAGCG11All0
ORF1ab/nsp15A1-B216L216QTTaCAa11All0
ORF1ab/nsp15A1-B216L216KTTaAAa11All0
ORF1ab/nsp15A1-B216L216del2TTa--a11All0
ORF1ab/nsp15A1-B216L216StTatCa11AY.1030.000006
ORF1ab/nsp15A1-B216L216LttAttG11AY.1080.001103
ORF1ab/nsp15A1-B216L216StTatCa11AY.1090.00074
ORF1ab/nsp15A1-B216L216LttAttG11AY.1170.000085
ORF1ab/nsp15A1-B216L216LttAttG11AY.1180.000063
ORF1ab/nsp15A1-B216L216LttAttG11AY.120.2.10.000498
ORF1ab/nsp15A1-B216L216LttAttG11AY.130.000161
ORF1ab/nsp15A1-B216L216LttAttG11AY.16.10.00047
ORF1ab/nsp15A1-B216L216LttAttG11AY.230.00007
ORF1ab/nsp15A1-B216L216delTTA---11AY.290.000016
ORF1ab/nsp15A1-B216L216LttAttG11AY.320.000532
ORF1ab/nsp15A1-B216L216FttAttT11AY.330.000067
ORF1ab/nsp15A1-B216L216LttAttG11AY.370.000316
ORF1ab/nsp15A1-B216L216VTtaGta11AY.39.10.00004
ORF1ab/nsp15A1-B216L216VTtaGta11AY.40.000002
ORF1ab/nsp15A1-B216L216StTatCa11AY.40.000002
ORF1ab/nsp15A1-B216L216VTtaGta11AY.4.20.000022
ORF1ab/nsp15A1-B216L216LttAttG11AY.4.2.10.000149
ORF1ab/nsp15A1-B216L216VTtAGtG11AY.430.000004
ORF1ab/nsp15A1-B216L216FttAttT11AY.440.000006
ORF1ab/nsp15A1-B216L216LttAttG11AY.470.000031
ORF1ab/nsp15A1-B216L216LttAttG11AY.540.000095
ORF1ab/nsp15A1-B216L216LttAttG11AY.560.001605
ORF1ab/nsp15A1-B216L216LttAttG11AY.570.000656
ORF1ab/nsp15A1-B216L216StTatCa11AY.590.00053
ORF1ab/nsp15A1-B216L216XtTAtAG11AY.590.00053
ORF1ab/nsp15A1-B216L216LTtaCta11AY.60.000041
ORF1ab/nsp15A1-B216L216VTtaGta11AY.610.000105
ORF1ab/nsp15A1-B216L216delTTA---11AY.660.00107
ORF1ab/nsp15A1-B216L216LttAttG11AY.70.000196
ORF1ab/nsp15A1-B216L216delTTA---11AY.780.001541
ORF1ab/nsp15A1-B216L216delTTA---11AY.850.000427
ORF1ab/nsp15A1-B216L216LttAttG11AY.970.001701
ORF1ab/nsp15A1-B216L216delTTA---11AY.980.000079
ORF1ab/nsp15A1-B216L216VTtaGta11AY.98.10.000048
ORF1ab/nsp15A1-B216L216del2TTa--a11AY.98.10.000048
ORF1ab/nsp15A1-B216L216ITtaAta11B.10.000009
ORF1ab/nsp15A1-B216L216MTtAAtG11B.10.000009
ORF1ab/nsp15A1-B216L216VTtaGta11B.10.000009
ORF1ab/nsp15A1-B216L216delTTA---11B.10.000009
ORF1ab/nsp15A1-B216L216StTAtCG11B.10.000009
ORF1ab/nsp15A1-B216L216delTTA---11B.1.10.000018
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.100.001115
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.120.007463
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.1280.007092
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.1370.0125
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.150.013514
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.2010.02439
ORF1ab/nsp15A1-B216L216KTTaAAa11B.1.1.2140.000055
ORF1ab/nsp15A1-B216L216StTatCa11B.1.1.2140.000055
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.2200.001859
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.2440.015385
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.2580.003257
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.2770.000759
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.3160.000925
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.3170.000412
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.330.000421
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.3350.012987
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.3370.003597
ORF1ab/nsp15A1-B216L216StTatCa11B.1.1.3480.000796
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.370.000193
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.3750.011905
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.4020.011111
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.4160.000905
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.4340.000349
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.440.00241
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.4860.001577
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.50.008333
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.5240.020833
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.5280.004808
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.540.003021
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1.560.017857
ORF1ab/nsp15A1-B216L216delTTA---11B.1.1.700.000341
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1260.001276
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1460.004237
ORF1ab/nsp15A1-B216L216LttAttG11B.1.160.140.002119
ORF1ab/nsp15A1-B216L216ITtaAta11B.1.1770.000013
ORF1ab/nsp15A1-B216L216VTtaGta11B.1.1770.000013
ORF1ab/nsp15A1-B216L216delTTA---11B.1.177.160.000664
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.190.001431
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.210.000076
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.230.003236
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.350.000691
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.40.000211
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.440.000519
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.510.004566
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.580.001332
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.620.001192
ORF1ab/nsp15A1-B216L216delTTA---11B.1.177.680.015152
ORF1ab/nsp15A1-B216L216LttAttG11B.1.177.750.001041
ORF1ab/nsp15A1-B216L216FttAttT11B.1.177.860.000183
ORF1ab/nsp15A1-B216L216LttAttG11B.1.1880.016667
ORF1ab/nsp15A1-B216L216QTTaCAa11B.1.20.000009
ORF1ab/nsp15A1-B216L216VTtaGta11B.1.20.000009
ORF1ab/nsp15A1-B216L216LttAttG11B.1.2010.005682
ORF1ab/nsp15A1-B216L216LttAttG11B.1.2120.016667
ORF1ab/nsp15A1-B216L216MTtAAtG11B.1.2340.000132
ORF1ab/nsp15A1-B216L216LttAttG11B.1.2600.003344
ORF1ab/nsp15A1-B216L216LttAttG11B.1.2890.00266
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3010.005917
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3200.001245
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3300.028571
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3360.002439
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3370.005587
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3480.018182
ORF1ab/nsp15A1-B216L216LttAttG11B.1.351.50.0006
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3550.011111
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3560.001727
ORF1ab/nsp15A1-B216L216LttAttG11B.1.36.10.00114
ORF1ab/nsp15A1-B216L216FttAttT11B.1.36.10.00114
ORF1ab/nsp15A1-B216L216LttAttG11B.1.36.100.004785
ORF1ab/nsp15A1-B216L216LttAttG11B.1.36.260.002857
ORF1ab/nsp15A1-B216L216delTTA---11B.1.36.290.000517
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3610.001289
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3620.001541
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3630.012987
ORF1ab/nsp15A1-B216L216delTTA---11B.1.3750.00082
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3800.006623
ORF1ab/nsp15A1-B216L216LttAttG11B.1.3890.001002
ORF1ab/nsp15A1-B216L216FttAttT11B.1.3960.000706
ORF1ab/nsp15A1-B216L216delTTA---11B.1.416.10.001563
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4240.008065
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4260.001009
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4280.00102
ORF1ab/nsp15A1-B216L216LttAttG11B.1.438.10.000107
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4430.004673
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4560.003268
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4600.017857
ORF1ab/nsp15A1-B216L216ITtaAta11B.1.4620.007246
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4690.00361
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4730.019231
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4910.052632
ORF1ab/nsp15A1-B216L216LttAttG11B.1.4970.000315
ORF1ab/nsp15A1-B216L216FttAttT11B.1.4970.000315
ORF1ab/nsp15A1-B216L216LTtaCta11B.1.4990.00105
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5030.002488
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5180.011765
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5240.001406
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5300.007143
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5670.003333
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5690.014493
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5740.002151
ORF1ab/nsp15A1-B216L216LttAttG11B.1.5790.011236
ORF1ab/nsp15A1-B216L216delTTA---11B.1.5850.027778
ORF1ab/nsp15A1-B216L216ITtaAta11B.1.5960.000087
ORF1ab/nsp15A1-B216L216ATTAGCG11B.1.617.20.000004
ORF1ab/nsp15A1-B216L216delTTA---11B.1.6200.000946
ORF1ab/nsp15A1-B216L216delTTA---11B.1.621.10.000506
ORF1ab/nsp15A1-B216L216LttAttG11B.1.6220.012987
ORF1ab/nsp15A1-B216L216LttAttG11B.1.6270.00202
ORF1ab/nsp15A1-B216L216LttAttG11B.1.6280.000352
ORF1ab/nsp15A1-B216L216LttAttG11B.1.700.02439
ORF1ab/nsp15A1-B216L216LttAttG11B.1.810.021277
ORF1ab/nsp15A1-B216L216LttAttG11B.1.88.10.004808
ORF1ab/nsp15A1-B216L216LttAttG11B.400.000364
ORF1ab/nsp15A1-B216L216LttAttG11B.410.008
ORF1ab/nsp15A1-B216L216LttAttG11B.570.015152
ORF1ab/nsp15A1-B216L216LttAttG11P.70.004367
ORF1ab/nsp15A1-B216L216delTTA---11Q.20.000613
ORF1ab/nsp15A1-B216L216LttAttG11Q.80.000165
ORF1ab/nsp15A1-B216L216LttAttG11R.10.00009
ORF1ab/nsp15A1-B216L216VTtaGta11S.10.00495