CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 214 | L214L | L6666L | syn | ttA | ttG | 111307 | 111247 | 0.999461 | 20260-20262 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 111247 | 111307 | All | 0.021277 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 40109 | 40109 | B.1.526 | 0.942743 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 18757 | 18758 | B.1.617.2 | 0.070628 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 10982 | 10982 | AY.14 | 0.966555 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9590 | 9590 | AY.54 | 0.914378 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5418 | 5418 | AY.13 | 0.872183 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3180 | 3180 | AY.53 | 0.914319 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2770 | 2770 | B.1.637 | 0.202411 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2458 | 2458 | AY.30 | 0.972695 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2301 | 2301 | AY.16 | 0.873576 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1633 | 1633 | AY.8 | 0.989697 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1152 | 1155 | AY.4 | 0.001793 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1152 | 1152 | AY.50 | 0.920863 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1059 | 1059 | AY.51 | 0.962727 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 888 | 888 | AY.16.1 | 0.417293 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 856 | 856 | AY.40 | 0.825458 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 732 | 732 | AY.52 | 0.596091 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 719 | 719 | AY.4.2 | 0.015594 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 709 | 712 | B.1 | 0.006494 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 576 | 576 | A.27 | 0.953642 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 446 | 446 | AY.15 | 0.991111 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 372 | 374 | B.1.1.7 | 0.000333 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 343 | 343 | AY.19 | 0.391106 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 284 | 284 | B.1.1.214 | 0.01575 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 266 | 268 | AY.43 | 0.001179 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 259 | 259 | B.1.567 | 0.863333 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 255 | 255 | AY.49 | 0.814696 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 245 | 245 | B.1.177.86 | 0.044946 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 223 | 223 | AY.44 | 0.001357 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 181 | 181 | AY.48 | 0.084186 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 129 | 129 | AY.38 | 0.064403 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 111 | 111 | AY.62 | 0.048366 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 109 | 109 | AY.55 | 0.1 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 97 | 97 | AY.18 | 0.979798 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 89 | 89 | AY.17 | 0.729508 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 88 | 88 | B.1.1 | 0.001596 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 87 | 87 | AY.98 | 0.006873 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 82 | 86 | AY.100 | 0.003773 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 84 | 84 | B.1.1.63 | 0.032407 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 83 | 83 | B.1.2 | 0.000731 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 75 | 75 | AY.67 | 0.034819 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 74 | 74 | AY.26 | 0.002095 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 71 | 71 | AY.75 | 0.003978 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 62 | 62 | AY.59 | 0.032839 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 54 | 54 | AY.25 | 0.000325 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 53 | 53 | B.1.1.50 | 0.035981 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 52 | 52 | AY.103 | 0.000323 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 52 | 52 | AY.31 | 0.962963 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 52 | 52 | AY.65 | 0.027719 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 50 | 50 | AY.56 | 0.080257 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 49 | 49 | AY.9.2 | 0.0018 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 48 | 48 | AY.105 | 0.030868 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 32 | 48 | AY.3 | 0.000318 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 48 | 48 | AY.64 | 0.028571 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 48 | 48 | AY.75.1 | 0.008655 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 43 | 43 | AY.46 | 0.004475 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 43 | 43 | B.1.623 | 0.023069 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 42 | 42 | AY.10 | 0.022258 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 38 | 38 | AY.47 | 0.001182 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 36 | 36 | AY.37 | 0.011378 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 35 | 35 | AY.61 | 0.003667 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 34 | 34 | AY.39 | 0.00084 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 32 | 32 | AY.117 | 0.002705 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 31 | 31 | AY.70 | 0.006464 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 27 | 27 | AY.68 | 0.007391 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 27 | 27 | B.1.438.1 | 0.002896 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 26 | 26 | B.1.214 | 0.095238 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 25 | 25 | AY.85 | 0.010679 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 24 | 24 | AY.86 | 0.019917 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 23 | 23 | AY.5.4 | 0.006364 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 23 | 23 | P.1 | 0.000362 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 22 | 22 | AY.58 | 0.019964 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 22 | 22 | B | 0.002812 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 21 | 22 | B.1.177 | 0.000277 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 20 | 20 | B.1.177.73 | 0.011325 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 19 | 19 | A | 0.007353 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 19 | 19 | AY.102 | 0.000504 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 19 | 19 | AY.45 | 0.002312 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 19 | 19 | B.1.258 | 0.001264 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 18 | 18 | AY.116 | 0.005162 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 18 | 18 | B.1.160 | 0.000561 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 18 | 18 | C.37 | 0.002089 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 17 | 17 | AY.33 | 0.001135 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 17 | 17 | AY.35 | 0.003962 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 17 | 17 | AY.73 | 0.011311 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 17 | 17 | AY.9 | 0.001149 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 17 | 17 | B.1.409 | 0.013281 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 16 | 16 | AY.110 | 0.001803 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 16 | 16 | AY.28 | 0.030246 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 16 | 16 | AY.78 | 0.024653 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 15 | 15 | AY.24 | 0.006466 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 14 | 14 | AY.41 | 0.004115 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 14 | 14 | AY.42 | 0.000563 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 13 | 13 | AY.21 | 0.024668 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 12 | 12 | AY.23 | 0.000837 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 11 | 11 | Q.1 | 0.00139 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 10 | 10 | AY.114 | 0.002311 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 10 | 10 | AY.77 | 0.011274 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 10 | 10 | B.1.597 | 0.046296 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 9 | AY.121 | 0.001083 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | AY.29 | 0.000142 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | AY.6 | 0.00037 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | AY.7.1 | 0.001014 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | AY.9.1 | 0.000754 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | B.1.1.254 | 0.101124 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | B.1.1.265 | 0.028391 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | B.1.1.312 | 0.017208 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 9 | 9 | B.1.628 | 0.003171 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | AY.39.1 | 0.000317 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | AY.84 | 0.0035 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | B.1.1.519 | 0.000318 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | B.1.258.17 | 0.000832 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | B.1.351 | 0.000238 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | B.1.429 | 0.000188 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 7 | 8 | B.1.596 | 0.00061 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | C.1.1 | 0.615385 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 8 | 8 | C.36 | 0.007286 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 7 | 7 | AY.71 | 0.003325 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 7 | 7 | AY.93 | 0.001912 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 7 | 7 | AY.99.2 | 0.000645 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | AY.106 | 0.002009 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | AY.120 | 0.000223 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | AY.36 | 0.000889 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | AY.5 | 0.000124 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | AY.87 | 0.004996 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | AY.88 | 0.005305 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | B.1.1.222 | 0.001224 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | B.1.1.294 | 0.007595 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | B.1.177.7 | 0.000989 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | B.1.214.2 | 0.003597 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | AY.34 | 0.000485 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | AY.46.2 | 0.003177 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | AY.7.2 | 0.002796 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | AY.79 | 0.006053 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | AY.81 | 0.00996 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.1.192 | 0.011547 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.1.318 | 0.001509 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.319 | 0.015244 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.427 | 0.000252 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.517 | 0.002135 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.575 | 0.001517 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 5 | 5 | B.1.625 | 0.011765 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 5 | D.2 | 0.00015 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | AY.118 | 0.000251 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | AY.119 | 0.000141 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | AY.63 | 0.001547 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | B.1.1.507 | 0.034783 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 4 | B.1.234 | 0.000264 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | B.1.311 | 0.001098 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 4 | B.1.524 | 0.004219 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 4 | 4 | P.1.12 | 0.001936 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | A.29 | 0.015957 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.101 | 0.001471 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.104 | 0.005952 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.12 | 0.000948 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.95 | 0.002283 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | AY.99.1 | 0.004658 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | B.1.1.448 | 0.006098 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | B.1.336 | 0.007317 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | B.1.561 | 0.001191 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 3 | B.1.576 | 0.001813 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | B.1.609 | 0.001438 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | N.5 | 0.0053 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | P.1.1 | 0.000953 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | P.1.16 | 0.001122 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.109 | 0.001479 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.22 | 0.004184 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.66 | 0.002139 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.80 | 0.002257 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.1.398 | 0.006452 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.1.420 | 0.002012 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.1.437 | 0.020833 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.110.1 | 0.2 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.530 | 0.014286 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.544 | 0.012048 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.1.580 | 0.00813 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | B.55 | 0.0059 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.513 | 0.012346 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.1.528 | 0.004808 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.160.33 | 0.004425 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.165 | 0.011905 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.267 | 0.018519 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.36.37 | 0.002778 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.40 | 0.019608 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | B.60 | 0.015873 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | C.6 | 0.037037 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp15A1-B | 214 | L214L | ttA | ttG | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|